Gvermi5277.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5277.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR) HSP 1 Score: 94.4 bits (233), Expect = 2.420e-18 Identity = 69/226 (30.53%), Postives = 107/226 (47.35%), Query Frame = 0
Query: 28 TAAQGKRSILKRYENALSLAKKRLNASQRRYKQDFNRKVMEGPHLKEGDKGFLDKPGK-------------TSGEPPDLTRKLVSATSGPYKVLATYRDTVAIEVNGLKEVVSRNRMMKVLTPSPSGMPATSSQRQRMKLPHQTTSGVKTPLDKGKRITGLVEPLLEAPDAIMTPEGDILYAVDHIVSHRQTPARVLSHVRWYGYKSKNDTEEPPGHIPENFLRRY 240
T Q KR+ L++ +AL A+ +L+ASQ+RYK DF++KV P + GD ++D+P + T+G +L+ KL+ T GP++V + TV IE +G++ VS +R+ K+ P G + + +A TP + Y VD IV HR T + VRWYGY + +DT EP +P+ F+ RY
Sbjct: 585 TPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPPRPLTSVERRTRAQGTTGT-DELSVKLLPKTEGPFRVRSATDTTVLIEQDGVENRVSIDRVTKM------------------------------PRGPGDTVASAIPSASDAQTT--TPRAE--YVVDRIVGHRMTRGGIEYKVRWYGYAASDDTYEPSEGLPQPFIDRY 775
BLAST of Gvermi5277.t1 vs. uniprot
Match: R7Q4X3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X3_CHOCR) HSP 1 Score: 92.0 bits (227), Expect = 1.040e-17 Identity = 67/218 (30.73%), Postives = 102/218 (46.79%), Query Frame = 0
Query: 24 PQAP-TAAQGKRSILKRYENALSLAKKRLNASQRRYKQDFNRKVMEGPHLKEGDKGFLDKPGKTSGEPPDLTRKLVSATSGPYKVLATYRDTVAIEVNGLKEVVSRNRMMKVLTPSPSGMPATSSQRQRMKLPHQTTSGVKTPLDKGKRITGLVEPLLEAPDAIMTPEGDILYAVDHIVSHRQTPARVLSHVRWYGYKSKNDTEEPPGHIPENFLRRY 240
P+ P T Q KR+ L++ +AL A+ +L+ASQ+RYK DF++KV P + GD ++D+P + P + A GP++V + TV IE +G++ VS +R+ K+ P G + + +A TP + Y VD IV HR T VRWYGY + +DT EP +P+ F+ RY
Sbjct: 281 PEDPRTPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRPPR----PLTSVERRTRAQEGPFRVRSATDTTVLIEQDGVENRVSIDRVTKM------------------------------PRGPGDTVASAIPSASDAQTT--TPRAE--YVVDRIVGHRMTRGGTEYKVRWYGYAASDDTYEPSEGLPQPFIDRY 460
BLAST of Gvermi5277.t1 vs. uniprot
Match: R7QU67_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU67_CHOCR) HSP 1 Score: 77.0 bits (188), Expect = 1.150e-12 Identity = 61/211 (28.91%), Postives = 100/211 (47.39%), Query Frame = 0
Query: 28 TAAQGKRSILKRYENALSLAKKRLNASQRRYKQDFNRKVMEGPHLKEGDKGFLDKP-------------GKTSGEPPDLTRKLVSATSGPYKVLATYRDTVAIEVNGLKEVVSRNRMMKVLTPSPSGMPATSSQRQRMKLPHQTTSGVKTPLDKGKRITGLVEPLLEAPDAIMTPEGDILYAVDHIVSHRQTPARVLSHVRWYGYKSKNDT 225
T Q KR+ L++ + L A+ ++ A+Q+RYK++F++KV P ++EGD+ ++D+P G+ G D++ KL+ T GP++V TV +E + L VS +R+ + MP R T G+ P ++ G D TPE + V+ +V+HR P + VRWYGY +DT
Sbjct: 187 TPVQYKRATLRKLRDVLDRARVKMTAAQKRYKENFDKKVRFRPVIQEGDQVYVDRPPPALRAAERRGRDGQGLGT-DDMSVKLLPKTEGPFRVRKATDTTVTVEQDRLPVPVSIDRVTR--------MPRGLGDRT------MPTEGISAPSERINPPHG---------DGANTPEE---FVVELLVAHRDIPTGLEYKVRWYGYIPADDT 370 The following BLAST results are available for this feature:
BLAST of Gvermi5277.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5277.t1 ID=Gvermi5277.t1|Name=Gvermi5277.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=252bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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