Gvermi5270.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5270.t1
Unique NameGvermi5270.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length214
Homology
BLAST of Gvermi5270.t1 vs. uniprot
Match: A0A2V3J6E0_9FLOR (Cell division control protein 42-like n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3J6E0_9FLOR)

HSP 1 Score: 347 bits (889), Expect = 5.200e-120
Identity = 164/179 (91.62%), Postives = 173/179 (96.65%), Query Frame = 0
Query:   35 MVYSYAENKFPTDYIPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGEAPLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRATAAPTACCTIA 213
            MVYSYAENKFPTDY+PTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVH PSLEN+ERRWAPEIKRV PGSHMILCGCKMDLRHDPVEVERLRQRG+AP++T EGE V+R+IGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRR+ +AP ACCTIA
Sbjct:    1 MVYSYAENKFPTDYVPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHHPSLENVERRWAPEIKRVCPGSHMILCGCKMDLRHDPVEVERLRQRGQAPVTTAEGETVARNIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRSASAPGACCTIA 179          
BLAST of Gvermi5270.t1 vs. uniprot
Match: M2X0X3_GALSU (Cell division control protein 42 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X0X3_GALSU)

HSP 1 Score: 224 bits (572), Expect = 1.810e-71
Identity = 108/193 (55.96%), Postives = 145/193 (75.13%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYIPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGEAPLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRATAAPTACCTI 212
            +K V+VGDG+VGKTCM+ SY  N+FPTDY+PTVFD +TATV VD  P  +EL DTAGQEDY+RLRALSY +TDVFILC+S+V+ PS EN+E +W PE++R SPG  +IL G K+DL +DP E+ +L +RG++P++ + G+++S  IG   + ECSA TQ GLK+VFDEA+ +A  P       T+   ACC+I
Sbjct:    7 IKIVVVGDGAVGKTCMLMSYTTNRFPTDYVPTVFDNYTATVMVDDEPVQIELWDTAGQEDYQRLRALSYFQTDVFILCFSLVNPPSFENVESKWIPELQRNSPGVPIILAGTKLDLVNDPQELSKLSKRGQSPIAVEMGKQLSSKIGG-VYRECSAFTQAGLKEVFDEAIRAALAPKLSNSVYTSTNQACCSI 198          
BLAST of Gvermi5270.t1 vs. uniprot
Match: A0A6T6BWC2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BWC2_9RHOD)

HSP 1 Score: 219 bits (558), Expect = 3.140e-69
Identity = 99/171 (57.89%), Postives = 136/171 (79.53%), Query Frame = 0
Query:   19 RVKTVLVGDGSVGKTCMVYSYAENKFPTDYIPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGEAPLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEAL 189
            +VK V+VGDGSVGKTCM++SYA N+FPT+Y+PTVFDT+TA+V +      LE+ DTAGQ+DY+RLRAL+Y  T+V +LCYS+V + S EN+  +WAPE++   P + +ILCG K DLR DPV +E+L+++G  P+ST +GE++   +GA +F ECSALT+EGLKDVFDEA+
Sbjct:    7 KVKIVIVGDGSVGKTCMLHSYARNEFPTEYVPTVFDTYTASVRISEDLVGLEIWDTAGQDDYDRLRALTYFNTNVIVLCYSVVSKASFENVLNKWAPEVQFRCPDAAVILCGTKTDLRTDPVTLEKLKKKGHYPISTLQGERMQTKVGASAFMECSALTKEGLKDVFDEAI 177          
BLAST of Gvermi5270.t1 vs. uniprot
Match: A0A0B7MU44_9FUNG (Cell division control protein 42 homolog n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7MU44_9FUNG)

HSP 1 Score: 214 bits (544), Expect = 2.650e-67
Identity = 95/183 (51.91%), Postives = 138/183 (75.41%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYIPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGEAPLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRA 202
            +K V+VGDG+VGKTC++ SY  NKFP++Y+PTVFD +  TV + G P TL L DTAGQEDY+RLR LSY +TDVF++C+S+    S EN++ +W PE+    PG   ++ G ++DLR +P  +E+L ++ +AP+  D GEK++R +GA  + ECSALTQ+GLK+VFDEA+++A +P P+PR+A
Sbjct:    5 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQVDLRDEPSVIEKLAKQKQAPIDADSGEKLARELGAVKYVECSALTQKGLKNVFDEAIVAALEP-PQPRKA 186          
BLAST of Gvermi5270.t1 vs. uniprot
Match: A0A162UHE7_PHYB8 (Uncharacterized protein n=3 Tax=Mucorales TaxID=4827 RepID=A0A162UHE7_PHYB8)

HSP 1 Score: 213 bits (542), Expect = 5.160e-67
Identity = 98/182 (53.85%), Postives = 135/182 (74.18%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYIPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGEAPLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRR 201
            +K V+VGDG+VGKTC++ SY  N FP +YIPTVFD ++A V VDG+P  L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN++ +W PEI   +P + MIL G K+DLR DP  + +LRQ+  AP++  +  ++++ IGA  + ECSALTQ+GLK+VFDEA+ +   P P P+R
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSFENVKTKWYPEISHHAPNTPMILVGTKLDLREDPETIAKLRQKHMAPITYSQSLQMAKDIGAVKYLECSALTQKGLKNVFDEAIRAVLCPAPPPKR 185          
BLAST of Gvermi5270.t1 vs. uniprot
Match: R1DYV5_EMIHU (Rac1, RHO family GTPase n=3 Tax=Eukaryota TaxID=2759 RepID=R1DYV5_EMIHU)

HSP 1 Score: 213 bits (542), Expect = 6.470e-67
Identity = 100/188 (53.19%), Postives = 138/188 (73.40%), Query Frame = 0
Query:   17 LVRVKTVLVGDGSVGKTCMVYSYAENKFPTDYIPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGEAPLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEAL---LSAWDPLPKPRR 201
            +  VK V+VGDG+VGKTC++ SY  N FP DYIPTVFD ++A V VDG+P  L L DTAGQEDY+RLR LSY +TDVF++ +S++ RPS EN++++W PE+K   P    IL G K+DLR D   V +LRQ+ + P+S +EG++++++IGA  + ECSALTQ+GLK+VFDEA+   L    P  KP++
Sbjct:    5 MTNVKCVIVGDGAVGKTCLLISYTTNAFPEDYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVAFSLISRPSYENVKQKWFPELKHHCPNCPFILVGTKLDLRSDGTTVAKLRQQNQTPISLEEGQEMAKTIGATKYLECSALTQKGLKNVFDEAIRVVLCPPAPAKKPKK 192          
BLAST of Gvermi5270.t1 vs. uniprot
Match: A0A7S3E9D3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E9D3_9RHOD)

HSP 1 Score: 213 bits (542), Expect = 6.690e-67
Identity = 99/173 (57.23%), Postives = 132/173 (76.30%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYIPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGEAPLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSA 192
            +K V++GDGSVGKTCM+ SYA+N+FP DY+PTVFDT++A VHVD  PR +EL DTAGQ+DY RLRALS+  T + ILC+S++   S  NIE +W  EI   +PG  +IL G K+DLR DPV+VE+L+QR +  ++T +G  ++R IGA  + ECSALTQ+GLKDVFDE + +A
Sbjct:    8 IKIVVIGDGSVGKTCMLISYAKNRFPLDYVPTVFDTYSAVVHVDDTPRRIELWDTAGQDDYSRLRALSFFGTHISILCFSLIAPASFSNIEFKWREEILLRAPGIPVILVGTKLDLRDDPVQVEKLKQRNQTAITTKQGMDLARQIGAVKYMECSALTQQGLKDVFDETIRAA 180          
BLAST of Gvermi5270.t1 vs. uniprot
Match: S7QMP1_GLOTA (Small GTPase Rac1 n=9 Tax=Agaricomycetes TaxID=155619 RepID=S7QMP1_GLOTA)

HSP 1 Score: 213 bits (541), Expect = 7.810e-67
Identity = 97/184 (52.72%), Postives = 136/184 (73.91%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYIPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGEAPLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPRRAT 203
            +K V+VGDG+VGKTC++ SY  N FP +YIPTVFD ++A V VDG+  +L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN+  +W PEI   +P + ++L G K+DLR DP  +E+LR+R  AP+   +G  ++R IGA  + ECSALTQ+GLK VFDEA+ +  +P P+ +++T
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKTISLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSFENVRTKWHPEISHHAPQTSIVLVGTKLDLREDPATIEKLRERRMAPIQYSQGVAMARDIGAVKYLECSALTQKGLKTVFDEAIRAVLNPPPREKKST 187          
BLAST of Gvermi5270.t1 vs. uniprot
Match: G4T953_SERID (Related to Rac1 GTP binding protein n=2 Tax=Serendipita TaxID=358905 RepID=G4T953_SERID)

HSP 1 Score: 213 bits (541), Expect = 8.060e-67
Identity = 99/181 (54.70%), Postives = 132/181 (72.93%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYIPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGEAPLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPR 200
            +K V+VGDG+VGKTC++ SY  N FP +YIPTVFD +TA V VDG+  +L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN+  +W PEI   +PG   +L G K+DLR DP  +E+LR+R  AP++  +G  + + IGA  F ECSALTQ+GLK+VFDEA+ +   P  KP+
Sbjct:    5 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYTAQVMVDGKTISLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSLVSPPSFENVRSKWYPEINHHAPGVPKLLVGTKLDLREDPASIEKLRERRMAPVTYQQGVSMHKEIGATKFLECSALTQKGLKNVFDEAIRAVLYPTAKPK 185          
BLAST of Gvermi5270.t1 vs. uniprot
Match: A0A165IZP5_EXIGL (Rac1 GTP binding protein n=2 Tax=Agaricomycetes incertae sedis TaxID=355688 RepID=A0A165IZP5_EXIGL)

HSP 1 Score: 212 bits (540), Expect = 1.070e-66
Identity = 97/181 (53.59%), Postives = 134/181 (74.03%), Query Frame = 0
Query:   20 VKTVLVGDGSVGKTCMVYSYAENKFPTDYIPTVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSIVHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGEAPLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPR 200
            +K V+VGDG+VGKTC++ SY  N FP +YIPTVFD ++A V VDG+  +L L DTAGQEDY+RLR LSY +TDVF++C+S+V  PS EN+  +W PEI   +P +  +L G K+DLR DP  +E+LR+R  +P+S  +G  +++ IGA  + ECSALTQ+GLK VFDEA+ +  +P PKP+
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKTISLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSYENVRTKWHPEISHHAPSTATLLVGTKLDLREDPQTIEKLRERRMSPISYQQGVSMAKDIGAAKYLECSALTQKGLKTVFDEAIRAVLNPQPKPK 184          
The following BLAST results are available for this feature:
BLAST of Gvermi5270.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6E0_9FLOR5.200e-12091.62Cell division control protein 42-like n=2 Tax=Rhod... [more]
M2X0X3_GALSU1.810e-7155.96Cell division control protein 42 n=1 Tax=Galdieria... [more]
A0A6T6BWC2_9RHOD3.140e-6957.89Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A0B7MU44_9FUNG2.650e-6751.91Cell division control protein 42 homolog n=1 Tax=P... [more]
A0A162UHE7_PHYB85.160e-6753.85Uncharacterized protein n=3 Tax=Mucorales TaxID=48... [more]
R1DYV5_EMIHU6.470e-6753.19Rac1, RHO family GTPase n=3 Tax=Eukaryota TaxID=27... [more]
A0A7S3E9D3_9RHOD6.690e-6757.23Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
S7QMP1_GLOTA7.810e-6752.72Small GTPase Rac1 n=9 Tax=Agaricomycetes TaxID=155... [more]
G4T953_SERID8.060e-6754.70Related to Rac1 GTP binding protein n=2 Tax=Serend... [more]
A0A165IZP5_EXIGL1.070e-6653.59Rac1 GTP binding protein n=2 Tax=Agaricomycetes in... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 122..135
score: 38.28
coord: 20..41
score: 40.73
coord: 43..59
score: 31.0
coord: 60..82
score: 43.98
coord: 170..192
score: 30.95
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 20..195
e-value: 3.5E-12
score: 42.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 17..195
e-value: 1.5E-18
score: 77.6
NoneNo IPR availablePANTHERPTHR24072:SF17RHO-RELATED GTP-BINDING PROTEIN RHOJcoord: 15..212
NoneNo IPR availablePROSITEPS51419RABcoord: 13..213
score: 16.074339
NoneNo IPR availablePROSITEPS51420RHOcoord: 13..192
score: 20.706383
NoneNo IPR availableCDDcd00157Rhocoord: 20..188
e-value: 1.02785E-92
score: 266.717
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 22..195
e-value: 1.2E-84
score: 297.2
IPR001806Small GTPasePFAMPF00071Rascoord: 21..189
e-value: 1.3E-46
score: 158.2
IPR001806Small GTPasePROSITEPS51421RAScoord: 10..213
score: 15.838209
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 16..197
e-value: 7.6E-61
score: 206.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..188
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 20..186
e-value: 1.1E-29
score: 101.2
IPR003578Small GTPase RhoPANTHERPTHR24072RHO FAMILY GTPASEcoord: 15..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:878599..879240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5270.t1Gvermi5270.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 878599..879240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5270.t1 ID=Gvermi5270.t1|Name=Gvermi5270.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=214bp
MARGGHTASPQQNDDSLVRVKTVLVGDGSVGKTCMVYSYAENKFPTDYIP
TVFDTFTATVHVDGRPRTLELLDTAGQEDYERLRALSYHETDVFILCYSI
VHRPSLENIERRWAPEIKRVSPGSHMILCGCKMDLRHDPVEVERLRQRGE
APLSTDEGEKVSRSIGADSFFECSALTQEGLKDVFDEALLSAWDPLPKPR
RATAAPTACCTIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR003578Small_GTPase_Rho