Gvermi5266.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5266.t1
Unique NameGvermi5266.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length801
Homology
BLAST of Gvermi5266.t1 vs. uniprot
Match: A0A2V3J848_9FLOR (DIS3-like exonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J848_9FLOR)

HSP 1 Score: 737 bits (1902), Expect = 5.140e-254
Identity = 399/796 (50.13%), Postives = 538/796 (67.59%), Query Frame = 0
Query:    5 PQSWTDEINTGSVLEVWCKGEIRFAYVCSVSDKTMAVNLVEFSDTDGCNFCESKISFGEVISVWPKSITPSSPRMLASAIEMGLDFLRNSPPRSLDLSTTYKNMRRVSKGNPKTPHDSFQVALSQFPLHSTAPAKSYAAITAATGILIASDTTRFKRAAPGSGWRALPPSVVESRGRCSFTDICKVILENSSKEGIRRPTVWSREQLDILREIEMVAAGGGKAKGRASAALDSLGYRPTDDGATRLLLDLDFWSTGPADTAVKKNTQAKNRSEINLKKSEMPSKSIGDGSMSISLQTERQ-ESQGWVFSPSILNDAREIRAVSREKRALLGREQKATKVSRRRCLLPTAGETAMRVYCIDDKNSRFLDDAFSVQILEGQERAKFFLHITDVDEVVKPGSAIDDLARERGMSLYLPLRPLHMLPAAVMDAASFCTNLATEAITIEIDFDLVSDSMLSWEVFPSLVPPVKRINYKQFDSVLMEDAMAADIGKDEFEDLRLIARIAPCLASKFDNHRMRRNRKATGNESDKTTELERNLMDSKSVASVRLVKRTDKSGSKAVRMAKVVDFQSHGAHRVVDDILTAAGALMRQFAKQNRVCLPEGRFAASYVARCGTAPLRRYSDLAIQRQIKSILFGSQPAGRRRMAELRVWLARRHSAGEITIAERRKDALFESLSAHCALQSSAAGKAFAELKAKVRDITVSKSSALKMDVTLEGSGLSTMVTVSGKLLTDILNLHQSSKNNGVDNIKRKENRL--DRNRAILTTAKSILVPSKRVWVQILNIDTSARIITGTAFEI 797
            P+SWTD +  GSV+E+W + ++RFA V S+ +K +   +   S  +     E+KIS+GEV++VWP SI P S   LA  + +GL+FL+NS PRSLDL+  Y +MRR+ KGN +    S ++ALS FPL  TA  +  AA+T A  IL+ +DTT FKRA PG GWRALPPSV E+RGRCSF D CK ILE+ S       + WSRE LDIL EIE+ AAGGG   GRA+ AL++LGYR TD+GAT LLLD+++WS+ P         Q+ + +  + KK   P    G+ S S         ++  W F P IL+DA +IR+ +R +R+ L   +   +    R LL ++    +RVYCIDD+NSRFLDD+FSV+ LEG +R +FFLHITDVDE VK GSAID +ARERG SLYLPL+PLHMLP   MDAASF T+L  EAITI ID DL  + +  W++FPS+VPPV RINY+QFD+++  DA A  + ++E  DL+LIA++A  L +K D  R+RR      +  +    LE N +++K VA VRLVKR   S SK  ++A+V+DFQS GAH +VD+ILT+ GAL+RQFAK+NRV LPEGR A++YVARCGTAPLRRY DL +QRQIK +LF  QP GRRRM ELR WLARRHS G+  +++ RK ALFESLS HCA Q +A G A+A ++ +VR+ T++KSS L+++V L+G+GLST+  VS +L    +   +   N  + N     +++   RN++IL +AKS+L P   V VQI +++ S++ I G   ++
Sbjct:   73 PKSWTDALRKGSVVELWSESQLRFALVSSLYEKGILAKVFIVSKGEVNISAETKISYGEVVAVWPASINPHSASALAKIVGLGLNFLKNSAPRSLDLADIYGDMRRIPKGNARAHRSSHEIALSLFPLSPTAEPERRAAVTVAAAILLGADTTHFKRAPPGFGWRALPPSVAEARGRCSFVDTCKSILEDRSHCS----SAWSREHLDILHEIEVAAAGGGVPNGRAATALEALGYRRTDEGATHLLLDIEYWSSVPV--------QSNDGAYPDSKKQSTPDTVSGEESSSTEASRGSSFQTPSWAFPPLILHDAHKIRSRARARRSALQATENPRQKDSARRLLRSSNGAVLRVYCIDDRNSRFLDDSFSVEQLEGSKRVRFFLHITDVDEYVKSGSAIDAIARERGQSLYLPLKPLHMLPPPAMDAASFSTSLPVEAITIMIDLDLDKNELHKWQLFPSVVPPVIRINYEQFDNIIKGDAKAIGLSREELADLQLIAKMASRLPAKLDTRRLRRREHTPHSSLENPIHLEANRVEAKKVAGVRLVKRQSASSSKPAKVARVIDFQSTGAHAIVDNILTSCGALIRQFAKENRVALPEGRDASTYVARCGTAPLRRYGDLVVQRQIKCVLFRKQPDGRRRMNELRNWLARRHSEGQKMVSQHRKSALFESLSIHCAQQCAATGNAYAMVRGRVRNTTITKSSNLRIEVALDGTGLSTVSEVSNELF-GYIKQRERQCNKDLSNGSGDGSKVAYQRNKSILASAKSVLAPGSLVSVQISDVNVSSQYIKGLIVDV 855          
BLAST of Gvermi5266.t1 vs. uniprot
Match: A0A5J4YVF8_PORPP (Putative ribonuclease n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVF8_PORPP)

HSP 1 Score: 291 bits (745), Expect = 5.220e-83
Identity = 234/734 (31.88%), Postives = 348/734 (47.41%), Query Frame = 0
Query:   16 SVLEVWCKGEIRFAYVCSVSDKTMAVNLVEFSDTDGCNFCESKISFGEVISVWPKSITPSSP--------RMLASAIEMGLDFLRNSPPRSLDLSTTYKNMRRVSKGNPKTPHDSFQVALSQFPLHSTAPAKSYAAITAATGILIASDTTRFKRAAPGSGWRALPPSVVESRGRCSFTDICKVILE-------NSSKEGIRRPTVWSREQLDILREIEMVAAGGGKAKG---RASAALDSLGYRPTDDGATRLLLDLDFWSTGPADTAVKKNTQAKNRSEINLKKSEMPSKSIGDGSMSISLQTERQESQGWVFSPSILNDAREIRAVSREKRALLGREQKATKVSRRRCLLPTAGETAMRVYCIDDKNSRFLDDAFSVQILE--GQERAKFFLHITDVDEVVKPGSAIDDLARERGMSLYLPLRPLHMLPAAVMDAASFCTNLATEAITIEIDFDLVSDSMLSWEVFPSLVPPVKRINYKQFDSVLMEDAMAADIGKDEFEDLRLIARIAPCLASKFDNHRMRRNRKATGNESDKTTELERNLMDSKSVASVRLVKRTDKSGSKAVRMAKVVDFQSHGAHRVVDDILTAAGALMRQFAKQNRVCLPEGRFAASYVARCGTAPLRRYSDLAIQRQIKSILFGSQPAGRRRMAELRVWLARRHSAGEITIAERRKDALFESLSAHCALQ--SSAAGKAFAELKAKVRDITVSKSSALKMDVTLEGSGLSTMVTVS 727
            +V+EVW    + +  V  + +K + V+LV+  D         ++S  EV+  W  S   SS          +LA+ I      L+ + PRSL+L   +  M R+ KGNPK+   S  VA   +                  G+++ASD+ +FKR APG+GWRALP SV  SR   +F   C  IL        +SS E  ++  VWS E L +LR +E+ A  G  A      A A L +LG+  +     R L  + FWS    D                                      E      W F   IL  ARE R  + ++R+ L + Q++    +      T   TA   YCIDDK++ F DDA S +++    Q   +  +H+ DVD VV   SA+D +AR+R  S+YLP  PLHMLPA V++AASF T+L TEAITI+   +   + ++SW++  ++VP V  + ++Q   +L     AA  G    + L L+      L       + RR  +A                      SVR  +R      KAV + K   ++    H V+D +L  AG  +R+FA+++R  LPE R +  +  RCGTAP+R+Y DLAIQRQIK++L G +P+ R +M +L  W+  R    +  + E+R+  L+E+L+ HCA +  SS  G A       + D TV   +A K+ V L  +GLS +  V+
Sbjct:  104 AVVEVWRSKRLVWGIVTELQEKHVVVDLVQPQDMQVLR--NVRVSLDEVVGTWGSSSVISSSADADEEPVHILAAKISRATAVLQKAAPRSLNLEKLHAKMARLEKGNPKSHISSATVADFFYAQRVLRVPSDPDVERICAGLVLASDSVKFKRGAPGTGWRALPGSVAASRAANAFELECAAILNASEHSPASSSAEQAKQ-VVWSAEHLQLLRALEVFAISGPPASTFPKSARAPLSALGFGHSQSETKRFLQRIGFWSKSDLD--------------------------------------ENGNRTSWAFPEHILEAAREQRDAAFQRRSQLQQSQRSRSAKQ-----STFSSTA---YCIDDKSATFRDDAVSCRLVTVADQRLIRVCVHVADVDAVVPRDSAVDLVARDRAQSIYLPRGPLHMLPAFVVEAASFSTDLPTEAITIDFMVNPERNEVVSWDISRNVVPAVHVLTFEQAIDLLK----AAPEGPLS-QWLALLKEATNTLLRVLPADQPRRQFRAD-------------------FMSVRSAQR-----GKAVVVDK---YEFSEVHEVLDSVLNVAGHYIREFARKHRAYLPERRGSRYFAMRCGTAPMRKYMDLAIQRQIKAVLTGHEPSRREQMVQLNKWIESRLVENKQVVQEQRQVYLYEALADHCAKRKASSVGGSA-------IMDATVISRNANKVRVRLLQTGLSAVALVN 749          
BLAST of Gvermi5266.t1 vs. uniprot
Match: A0A7S1TNE9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNE9_9RHOD)

HSP 1 Score: 244 bits (623), Expect = 3.140e-66
Identity = 211/712 (29.63%), Postives = 323/712 (45.37%), Query Frame = 0
Query:    7 SWTDEINTGSVLEVWCKGEIRFAYVC-------SVSDKTMAVNLVEFSDTD---GCNFCESKISFGEVISVWPKSITPSSPRMLASAIEMGLDFLRNSPPRSLDLSTTYKNMRRVSKGNPKTPHDSFQVALSQFPLHSTA-PAKSYAAITAATGILIASDTTRFKRAAPGSGWRALPPSVVESRGRCSFTDICKVILENSSKEGIRR-------PTVWSREQLDILREIEMVAAGGGKAKGRASAALDSLGYRPTDDGATRLLLDLDFWSTGPAD--TAVKKNTQAKNRSEINLKKSEMPSKSIGDGSMSISLQTERQESQGWVFSPSILNDAREIRAVSREKRALLGREQKATKVSRRRCLLPTAGETAMRVYCIDDKNSRFLDDAFSV-QILEGQERAK----FFLHITDVDEVVKPGSAIDDLARERGMSLYLPLRPLHMLPAAVMDAASFCTNLATEAITIEIDFDLVSDSMLSWEVFPSLVPPVKRINYKQFDSVLMEDAMAADIG--------KDEFEDLRLIARIAPCLA-SKFDNHRMRRNRKATGNESDKTTELERNLMDSKSVASVRLVKRTDKSGSKAVRMAKVVDFQSHGAHRVVDDILTAAGALMRQFAKQNRVCLPEGRFAASYVARCGTAPLRRYSDLAIQRQIKSILFGSQPAGRRRMAELRVWLARRHSAGEITIAERRKDALFESLSAHCALQS 684
            +W   ++ G+V+E+W    IRFA V        S + + M    V   DTD   G  F   K S  EV+SVWP  ++ +S     +A       + N+ PR+L+L   + ++   +K NP+    +   A + F       P++    I AA  +L++ D+ RFKRA  G GWRALP SV  +R   +F   C   +    ++  R         TVWSR+ ++ILR IE+ AA G      A      LG+    +GA   L  + FWS   A    ++++++      E+                                F P++L +A   R     +R +L  +   ++      L    G+ A+   C+DD  + F DDA S  ++  G   A       +H+ DV  VV  GSA+DD AR R  S+YLP  PLHMLP  +M+A SF     ++A++I +     S  ++ +++  SLVPPV    +      +   AM ++ G        +D   D  L   +    A S+ D  R +R+R      SD                SVRL         K  R+  V  +     H  +D++L +AG+ +R++A+ ++V LPE R +  +  RCGTAPLR+Y DL +QRQIK+IL   +PA R  M  L  WL  R    +  +   R+DAL  SLS+H + QS
Sbjct:    5 AWQALVSPGAVVELWRDRTIRFARVLESPEGGRSFTARWMEDCAVADGDTDESTGRAFV--KASMDEVVSVWPTYLSEASAAEFVAARGEAELLIANARPRTLELEALHASLCGFAKNNPRGCVSAVGAADALFASEQIRHPSELVGTICAA--LLLSLDSVRFKRAPAGYGWRALPKSVATARAYEAFEKRCAHAIGREKEQRSREINDNSSISTVWSRDDMEILRLIELCAASGKSFPRAAVPVFSKLGFESNANGARSFLQSVGFWSASDAHYGPSIQRDSDGGAPKEL------------------------------LAFPPAVLAEAAHQREKIEARRRILASKDGRSEAG----LWSYMGKVAV---CVDDVGANFRDDAVSCYELPSGDGHASRQIVVVVHVADVSAVVCEGSALDDAARNRAQSIYLPTGPLHMLPPVLMEAVSFSETAPSDAVSIAMTICTDSGELVRYKIARSLVPPVVCYTFDAAKEAI--SAMGSNNGHPKAVMRHRDSRGDAALALLVEAASAMSRADGGRRKRDR------SD--------------FVSVRL---------KGDRVT-VQQYAFSTIHEAMDEVLNSAGSCLRRYARHHKVYLPERRGSEFFAMRCGTAPLRKYMDLVVQRQIKAILQYERPAKREDMVALNKWLESRLVETKKLVQAHREDALLASLSSHVSTQS 643          
BLAST of Gvermi5266.t1 vs. uniprot
Match: A0A1X6NHZ0_PORUM (RNB domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NHZ0_PORUM)

HSP 1 Score: 173 bits (439), Expect = 1.790e-44
Identity = 105/295 (35.59%), Postives = 157/295 (53.22%), Query Frame = 0
Query:  193 ENSSKEGIRRPTVWSREQLDILREIEMVAAGGGKAKGRASAALDSLGYRPTDDGATRLLLDLDFWSTGPADTAVKKNTQAKNRSEINLKKSEMPSKSIGDGSMSISLQTERQESQGWVFSPSILNDAREIRAVSREKRALLGREQKATKVSRRRCLLPTAGETAMRVYCIDDKNSRFLDDAFSVQILEGQERA-----KFFLHITDVDEVVKPGSAIDDLARERGMSLYLPLRPLHMLPAAVMDAASFCTNLATEAITIEIDFDLVSDSMLSWEVFPSLVPPVKRINYKQFDSVL 482
            E  S+ G++   +W RE LDI+R +E+ AA     +G A+AA+  LGY PT   A RLL D+ FWS   A+                                    +++   + GW F P +L++AR +RA +R +R        A    RR CL    G     V+ +DD  +RFLDDA +++ +  +        +  +HI DVD VV  G+A+D LARERG SLYLP RPLHMLPAA M+ A F  +L TE + +++D D+ + +++ W+VF ++V PV+R+ Y  F++ L
Sbjct:   33 EALSRAGVK--ALWKREHLDIVRALEIAAASAAVPRGAAAAAMSGLGYTPTATEAARLLRDIGFWS---AEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSDGVTA-GWTFPPDVLDEARRLRAAARRRRVGFATGATAVGRGRRNCLAGRGG-----VWAVDDPAARFLDDAITIRRVRAKSVGDRDVWRVTVHIADVDAVVSVGTAMDTLARERGESLYLPARPLHMLPAAAMEGAGFSKDLPTETVAVQMDVDVGARALVDWDVFAAVVGPVRRVTYDGFNAAL 316          
BLAST of Gvermi5266.t1 vs. uniprot
Match: A0A7S0ZJC8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJC8_9RHOD)

HSP 1 Score: 153 bits (387), Expect = 1.430e-37
Identity = 118/350 (33.71%), Postives = 172/350 (49.14%), Query Frame = 0
Query:  311 FSPSILNDAREIRAVSREKRALLGREQKATKVSRRRCLLPTAGETAMRVYCIDDKNSRFLDDAFSVQILEGQERAKFFL----HITDVDEVVKPGSAIDDLARERGMSLYLPLRPLHMLPAAVMDAASFCTNLATEAITIEIDFDLVSDSMLSWEVFPSLVPPVKRINYKQFDSVLMEDAMAADIGKDEFEDLRLIARIAPCLASKFDNHRMRRNRKATGNESDKTTELERNLMDSKSVASVRLVKRTDKSGSKAVRMAKVVDFQSHGAHRVVDDILTAAGALMRQFAKQNRVCLPEGRFAASYVARCGTAPLRRYSDLAIQRQIKSILFGSQPAGRRRMAELRVWLARR 656
            F   IL DAR IR      R  + RE+ A     RR      G+   +V+CIDD  + F DDA S   +E  E  K FL    HI DVDE ++P S +D +A++R  S+YLP  PLHMLP  +M+A SF    A+EA+T+ +  D  S  +  + +  + +PP   + ++Q           A       ++L L+      L S++   +  +NR      SD                SVR       +G++ V    V  ++    H+ +D+IL  AG  +R+FAK  +V LPE R +  +  RCGTAP+R+Y DLA+QRQIKSI+ G     +  M  L  WL +R
Sbjct:   26 FPVHILEDARVIRESILNHRRAITREKSA-----RRGFESYFGQ---KVFCIDDAVANFRDDAISCSEIE--EFGKRFLVVSVHIADVDESIEPDSDLDAIAKDRAQSIYLPAGPLHMLPPVLMEALSFNAEYASEAVTVRMLIDPESGQVEHYSIKLTYLPPATILTFQQ-----------ASQAAKRTKELNLMLEAGDAL-SRYGRGKRNKNR------SD--------------YMSVRA------TGAQVV----VEKYEFSDIHKAMDEILNLAGNCIRRFAKSKKVFLPERRGSQFFALRCGTAPMRKYMDLAVQRQIKSIIKGQSVGTQEEMVALNKWLEKR 323          
BLAST of Gvermi5266.t1 vs. uniprot
Match: A0A6H5JKX1_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX1_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 1.260e-24
Identity = 116/366 (31.69%), Postives = 167/366 (45.63%), Query Frame = 0
Query:  359 VYCIDDKNSRFLDDAFSVQILEGQERAKFFLHITDVDEVVKPGSAIDDLARERGMSLYLPLRPLHMLPAAVMDAASFCTNLATEAITIEIDFDLVSDSMLSWEVFPSLVPPVKRINYKQFDSVLMEDAMAADIGKDEFEDLRLIARIAPCLASKFDNHRMRRNRKATGNESDKTTELERNLMDSKSVASVRLVKRTDKSGSKAVRMAKVVDFQSHGAHRVVDDILTAAGALMRQFAKQNRVCLP-----EGRFAASYVARCGTAPLRRYSDLAIQRQIKSILFGSQPAGRRRMAELRVWLARRHSAGEITIAERRKDALFESLSAHCALQSSAAGKAFAELKAKVRDITVSKSSALKMDVTLEGSG 719
            VYCID   +RFLDDAFSV      E  + F+HITDV  +V  GS +DD+AR R  S YLP  PL M+P   + A SF      EA+T+ I  D  +  + S  V  + +PP   + + Q D +L          K E  D RL AR+A  + +    +  RR+ +A+G         ER             VK    +G +   +      QS     +VD++LT     + +  K+  V +P     + R A    +R GT PLRRY D+  QRQI +IL GS    ++ + E   +L  R +    +  E       E+L+AHC  Q+ A G   A + A+         +    +V LEG G
Sbjct:  494 VYCIDGAGTRFLDDAFSVD----PETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPMALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFDQTDRLLEATE------KGETGDGRL-ARVAKEIQAL--EYVGRRSAEASGRR-------ERGREG---------VKFRKGAGGETQALEVAASRQS-----LVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGR-SRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETANYLTWRQNKTRASRDEEASRLSLEALAAHCLAQTRATGLEHAVVPAR--------GTGRGREVRLEGLG 816          
BLAST of Gvermi5266.t1 vs. uniprot
Match: M1V973_CYAM1 (Probable ribonuclease R n=2 Tax=cellular organisms TaxID=131567 RepID=M1V973_CYAM1)

HSP 1 Score: 120 bits (302), Expect = 2.300e-24
Identity = 150/613 (24.47%), Postives = 254/613 (41.44%), Query Frame = 0
Query:  150 ILIASDTTRFKRAAP-GSGWRALPPSVVESRGRCSFTDICKVILENSSKEGIRRPTVWSREQLDILREIEMVAAGGG------------KAKGR-------------ASAALDSLGYRPTDDGATRLLLDLDFWSTGPADTAVKKNTQAKNRSEINLKKSEMPSKSIGDGSMSISLQTERQESQGWVFSPSILNDAREIRAVSREKRALLGREQKATKVSRRRCLLPTAGETAMRVYCIDDKNSRFLDDAFSVQILE-------------GQERAKFFLHITDVDEVVKPGSAIDDLARERGMSLYLPLRPLHMLPAAVMDAASFCTNLATEAITIEIDF-------DLVSDSMLSWEVFP---SLVPPVKRINYKQFDSVLMEDAMAADIGKDEFEDLRLIARIAPCLASKFDNHRMRRNRKATGNESDKTTELERNLMDS--KSVASVRLVKRTDKSGSKAVRMAK-------VVDFQSHGAHRVVDDILTAAGALMRQFAKQNRVCLPE-----------GRFAASYVA-------------RCGTAPLRRYSDLAIQRQIKSIL-FGSQPA--GRRRMAELRVWLARRHSAGEITIAERRKDALFESLS 677
            I + SD  RF+R    G GWRALP  +V +R   SF   C+ +  +++++ + R   W  E L +LRE+EM+AA               K +G              A+A    +    + + A  +L+ L  W+     +   K + +   + +  + +  P   IG   ++              F  +++  AR +R+     R L GR +    V            +    +C+D  ++R LDDAFSV+I +             G  +  + +HI D+   +  G  +D +A +R  SLYLP RPLH+LP  + +AASF  +LAT+AIT+ + F          SD + + E F    S++PPV+RI+Y++ D +++ +                                           S+  T L++ L  +  +     R+  R  ++  +  R+A        V +F     + +VD +L AA   + +FA Q+++ +P            G  AA  V              R GTAPLRRY DL   RQI   L +G++     R ++A +   + R  SAG   +   R+  + + L+
Sbjct:  273 ITLGSDNFRFRRVPRYGGGWRALPEPMVRARIVESF---CERV--HATRQSLDR--TWHPEHLAVLRELEMLAASRSEHRRNLEPSLRTKRQGMSAPSTRLERLYPLAAAVCRRVASEVSPNTAISILVKLGQWTL----SETSKESASTPPATLKRRPNVCPEPKIGQKIIA-------------AFPDAVMTAARALRS-----RILSGRTRNQRSVW-----------SHQFAFCVDSSSARILDDAFSVEIEQRCDPSSGASGHRPGDLQVTWHVHIVDIGRWLPAGHPVDQIACQRAQSLYLPGRPLHLLPPPLANAASFSEHLATDAITVSLRFRERSNDQHTGSDDLGAIEWFTVRRSVIPPVQRISYEELDRLILSNRRVR--ASSXXXXXXXXXXXXXXXXXXXXXXXXXXXETLLQRASNPLTILQKALNSAALEQRMRARMHARQRRNAGRIARVAHRRDGSLAVAEFALSPGYCLVDALLAAASEALIRFAAQHKIPVPVTRWTRVQNTELGTLAAQKVTASEPNAVQAYRPQRFGTAPLRRYLDLMTLRQISLYLEYGAEAPLLTRAQVARIAAQVQRNASAGMQKVVASRQSLMLDVLA 843          
BLAST of Gvermi5266.t1 vs. uniprot
Match: A0A7J7IKD0_9RHOD (RNB domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IKD0_9RHOD)

HSP 1 Score: 115 bits (289), Expect = 1.090e-22
Identity = 142/539 (26.35%), Postives = 222/539 (41.19%), Query Frame = 0
Query:  150 ILIASDTTRFKRAAP-GSGWRALPPSVVESRGRCSFTDICKVILENSSKEGIRRPTVWSREQLDILREIEMVAAGGGKAKGRASAALDSLGYRPTDDGATRLLLDLDFWSTGPADTAVKKNTQAKNRSEINLKKSEMPSKSIGDGSMSISLQTERQESQGWVFSPSILNDA-----REIRAVSREKRALLGREQKATKVSRRRCLLPTAGETAMRVYCIDDKNSRFLDDAFSVQI----------LEGQERAK--FFLHITDVDEVVKPGSAIDDLARERGMSLYLPLRPLHMLPAAVMDAASFCTNLATEAITIEIDFDLVSDS---------MLSW-EVFPSLVPPVKRINYKQFDSVLMEDAMA-ADIGKDEFEDLRLIARIAPCLASK----FDNHRMRRNRKATGNESDKTTELERNLMDSKSVASVRLVKRTDKSGSKAVRMAKVVDFQSHGAHRVVDDILTAAGALMRQFAK-------------------QNRVCLPEGRFAASY-VARCGTAPLRRYSDLAIQRQIKSIL 635
            +++ +D  RFKR      GWRAL   +V  R   SF        E +     +    W  E L +LRE+EM+AA     +    A L        + G+    L   +    P   AV +      R E +L  +   S  +  G  + ++ T                       R   A   +      R  +   +S R  + P+   T +  +C+D  ++R LDDAFSV++          L G+  A+  + +HI DV   +  G  +D +A +R  SLYLP RPLH+LP  + +AASF  +L T A+T+ + F   S            + W +V  S+VPPV RI+Y+Q D +++ +  A +  G+ +  D R +        S+         ++  RKA  + +     LE  +        +R+  R  KS  +  ++A   D     A   +    +A+ AL+R   K                   Q    +P G+ +A+Y   RCGTAPLRRY DL   RQI   L
Sbjct:  266 LMLGADVFRFKRVPRLCGGWRALSEPLVRVRVVESFC-------ERACSPTRQANQTWHPEHLAVLRELEMLAASRHDTRKAPEAML----VNGNESGSVASRLTHLY----PLAAAVCR------RLERDLSPNSAMSLLVDLGQWTSNVSTSDSXXXXXXXXXXXXXXXXXXXXRNTIAAFPDTVMAAARALRTQLLSERTRMQPSVANTLL-AFCVDSSSARILDDAFSVEVEQESDGSSAHLPGERLARVTWHVHIADVGCWLPAGHPVDQVASQRAQSLYLPGRPLHLLPPPLANAASFSEHLPTNAVTVSLRFTEPSLEERTEQRRLGTIEWFDVRRSVVPPVLRISYEQLDHLILTNWRARSTAGRSDAADARTVETTTSNEVSEARVWISADHLQTLRKALASPA-----LEHRMR-------IRMHSRQSKSAGRVAQVAHRRDGSLAVAEFALSPGYSASEALIRYALKHSIPVPLTGWARVQELDVDQPSEIVPNGKTSAAYRPQRCGTAPLRRYLDLVTLRQISLYL 770          
BLAST of Gvermi5266.t1 vs. uniprot
Match: A0A482SRG6_9ARCH (RNB domain-containing ribonuclease n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRG6_9ARCH)

HSP 1 Score: 99.8 bits (247), Expect = 8.650e-18
Identity = 149/678 (21.98%), Postives = 261/678 (38.50%), Query Frame = 0
Query:    9 TDEINTGSVLEVWCKGEIRFA-YVCSVSDKTMAVNLVEFSDTDGCNFCESKISFGEVISVWPK---SITPSSPRMLASAIEMGLDFLRNSPPRSLDLSTTYKNMRRVSKGNPKTPHDSFQVAL----------------SQFPLHSTAPAKSYAAITAATGILIASDTTRFKRAAPGSGW-RALPPSVVESRGRCSFT---DICKVILENS----SKEGIRRPTVWSREQLDILREIEMVAAGGGKAKGRASA--------ALDSLGYRPT---DDGATRLLLDLDFWSTGPADTAVKKNTQAKNRSEINLKKSEMPSKSIGDGSMSISLQTERQESQGWVFSPSILNDAREIRAVSREKRALLGRE--QKATKVSRRRCLLPTAGETAMRVYCIDDKNSRFLDDAFSVQILEGQERAKFFLHITDVDEVVKPGSAIDDLARERGMSLYLPLRPLHMLPAAVMDAASFCTNLATEAITIEIDFDLVSDSMLSWEVFPSLVPPVKRINYKQFDSVLMEDAMAAD-----IGKDEFEDLRLIARIAPCLASKFDNHRMRRNRKATGNESDKTTELERNLMDSKSVASVRLVKRTDKSGSKAVRMAKVVDFQSHGAHRVVDDILTAAGALMRQFAKQNRVCLP-----EGRFAASYVARCGTAPLRRYSDLAIQRQIKSIL 635
            T  + TG++LE+   G + FA ++C   D    +  +           +  +   +V+SVW     S  P  P   A+     ++ LR+ P R LDL   ++    +   NP  P DS  +A+                S F +++ A A+ Y A +     L++ D   F+R A    W      +VV       +T   D  + I+E +    S+  +    V + E     R      A G   K  + A        AL+    +P+      A +L+L        P+        + K+ S     ++ + S  +  G M    Q E        + PS+L  A ++     ++RA +  +  +K  K   +  +   A   +  V CID K++ F DDA S+      E  +  +H+ DV   ++    +   A+ER  S YLP   +HM P   ++A +F +    EAIT     D  S S+L + VFPS++ PV   +  Q ++++   +  +      +  +  +DL L+  I   +    +N  +                          +A+V+     D   SK   + K+   +S  AH +++  L+        F   N +  P          +S V R    PLR +     QRQ+++ L
Sbjct:  122 TTVVQTGTILEIVHNGHLLFANFLCKKEDSNAIIVTLSSGK-------QITLDLAQVVSVWDHLADSQPPQDPESWAAVSTKAMELLRSLPSRKLDLVEFWQ---LIVTRNPTLPIDSIDLAVYLFQEKVFKSWIDPARSNFQVYAIAAAQRYVAAS-----LLSKDKVHFRRRASRKSWPEEAYGAVVPEDQSYVYTPNEDEVEYIIEGAYRAFSESVVINTEVTAFEAYYHSRRTGQQDAQGETEKKTSQAPSILRHLRALELYSMQPSAVPPPQALKLILKRLGQDASPSGARALL-VEMKHASGSYALRTGVDSGVMSSGDM----QGESVRFHVASWQPSVLEAATKLSEDQAKRRAAIQADAGRKYGKRGYQGRIDLRASSASHPVMCIDAKSATFFDDAISLC----PETGELLVHVIDVTGALRAHPELQQTAKERISSEYLPNGAIHMFPPKALEALTFSSKEPNEAITAAFKIDYASGSVLDYRVFPSIIGPVVSFDIDQANTIIEAKSSGSKNQVWPVATEAVKDLELLHDIGSRIVK--NNPWL--------------------------IANVKNRMLLDSRVSKKTGVMKIGFEESSPAHHIINACLSLYANATYHFCSSNNLPTPVAFVNRDTVNSSVVRRFAAHPLRNWISQQQQRQLRAAL 747          
BLAST of Gvermi5266.t1 vs. uniprot
Match: A0A7S0ZJH1_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJH1_9RHOD)

HSP 1 Score: 76.3 bits (186), Expect = 1.390e-12
Identity = 48/152 (31.58%), Postives = 74/152 (48.68%), Query Frame = 0
Query:   21 WCKGEIRFAYVCSVSDKTMAVNLVEFSDTDGCNFCESKISFGEVISVWPKSITPSSPRMLASAIEMGLDFLRNSPPRSLDLSTTYKNMRRVSKGNPKTPHDSFQVALSQFPLHSTAPAKSYAAITAATGILIASDTTRFKRAAPGSGWRALP 172
            W   ++ F     V +K+ +  ++    +   +    K S  E+IS+WP  +  S      S  ++  + + NS PRSL LS  +  +    K + K+  +S Q+A  +   H      S  A   A+ +LI+SDT RFKRAA G GWRALP
Sbjct:    1 WKDKKLVFVTPLEVGEKSFSFQILGSDSSSESSSDVQKASIDEIISIWPNRLWCSKTEF-QSQFQIASNLIANSTPRSLSLSEIHTELSSYGKNHSKSTLNSVQLA-QRLAEHGILNHHSLLARVVASALLISSDTVRFKRAAAGKGWRALP 150          
The following BLAST results are available for this feature:
BLAST of Gvermi5266.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J848_9FLOR5.140e-25450.13DIS3-like exonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
A0A5J4YVF8_PORPP5.220e-8331.88Putative ribonuclease n=1 Tax=Porphyridium purpure... [more]
A0A7S1TNE9_9RHOD3.140e-6629.63Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A1X6NHZ0_PORUM1.790e-4435.59RNB domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A7S0ZJC8_9RHOD1.430e-3733.71Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A6H5JKX1_9PHAE1.260e-2431.69RNB domain-containing protein n=2 Tax=Ectocarpus T... [more]
M1V973_CYAM12.300e-2424.47Probable ribonuclease R n=2 Tax=cellular organisms... [more]
A0A7J7IKD0_9RHOD1.090e-2226.35RNB domain-containing protein n=1 Tax=Cyanidiococc... [more]
A0A482SRG6_9ARCH8.650e-1821.98RNB domain-containing ribonuclease n=1 Tax=archaeo... [more]
A0A7S0ZJH1_9RHOD1.390e-1231.58Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001900Ribonuclease II/RSMARTSM00955RNB_2coord: 355..637
e-value: 6.5E-13
score: 58.9
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 357..598
e-value: 3.0E-30
score: 105.6
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 302..655
NoneNo IPR availablePANTHERPTHR23355:SF42EXORIBONUCLEASE II, MITOCHONDRIALcoord: 302..655
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 355..657

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:866177..868579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5266.t1Gvermi5266.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 866177..868579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5266.t1 ID=Gvermi5266.t1|Name=Gvermi5266.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=801bp
MRPAPQSWTDEINTGSVLEVWCKGEIRFAYVCSVSDKTMAVNLVEFSDTD
GCNFCESKISFGEVISVWPKSITPSSPRMLASAIEMGLDFLRNSPPRSLD
LSTTYKNMRRVSKGNPKTPHDSFQVALSQFPLHSTAPAKSYAAITAATGI
LIASDTTRFKRAAPGSGWRALPPSVVESRGRCSFTDICKVILENSSKEGI
RRPTVWSREQLDILREIEMVAAGGGKAKGRASAALDSLGYRPTDDGATRL
LLDLDFWSTGPADTAVKKNTQAKNRSEINLKKSEMPSKSIGDGSMSISLQ
TERQESQGWVFSPSILNDAREIRAVSREKRALLGREQKATKVSRRRCLLP
TAGETAMRVYCIDDKNSRFLDDAFSVQILEGQERAKFFLHITDVDEVVKP
GSAIDDLARERGMSLYLPLRPLHMLPAAVMDAASFCTNLATEAITIEIDF
DLVSDSMLSWEVFPSLVPPVKRINYKQFDSVLMEDAMAADIGKDEFEDLR
LIARIAPCLASKFDNHRMRRNRKATGNESDKTTELERNLMDSKSVASVRL
VKRTDKSGSKAVRMAKVVDFQSHGAHRVVDDILTAAGALMRQFAKQNRVC
LPEGRFAASYVARCGTAPLRRYSDLAIQRQIKSILFGSQPAGRRRMAELR
VWLARRHSAGEITIAERRKDALFESLSAHCALQSSAAGKAFAELKAKVRD
ITVSKSSALKMDVTLEGSGLSTMVTVSGKLLTDILNLHQSSKNNGVDNIK
RKENRLDRNRAILTTAKSILVPSKRVWVQILNIDTSARIITGTAFEIVKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR012340NA-bd_OB-fold