Gvermi5219.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5219.t1
Unique NameGvermi5219.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length300
Homology
BLAST of Gvermi5219.t1 vs. uniprot
Match: A0A2V3IDX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX8_9FLOR)

HSP 1 Score: 204 bits (518), Expect = 1.900e-60
Identity = 138/314 (43.95%), Postives = 174/314 (55.41%), Query Frame = 0
Query:   14 LAVLVSRAHAAEGFLAPCRADSDCRGSRQCR--------------KVTSVELDDISADKLFA---SSSQSCDDDAEYCMCFPVSGVKGLTVCNEDDDCEEEGESCWEGPNVCAFQPQIEALEGVEEKGQDALCLSSKDCSSDRQCVRVSS--IDILPLSI-------CLAKLSPPPSSAXXXXXXXXXXTSDDGEGGDS--SEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTRSIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL 299
            L+ L   A AA G LAPCR+DS+C G R CR                 S +L++  +  + A   S +QSC D+ +YC+C P    + L  C+ D DC + GE C    + C    Q+EA      K   +          D  C ++++  +D L  +        CLA+     +S     XXXXXX            SE+CIA +SL HL PH+L+Y KH++ARVLCD H SCATAGHMVR+RG  MMMK+YC   G C RSI LVNSPRY RALQI SD+P L FTA AARY T+AEEHVLRTAV  GL
Sbjct:   13 LSALAVSAFAAGGNLAPCRSDSNCAGERSCRAFALDLSSISTIFQSAQSEDLENPDSGTVLAILQSITQSCRDE-DYCLCVPTD--EDLIGCSSDSDCSD-GEECL--ADNCVADSQLEAA-----KEPKSCXXXXXXTVPDTICAKLTAGLLDSLAETFGFEDNGFCLARFKESSTSGKPGSXXXXXXXXXXXXXXXXXXSEICIAVKSLRHLQPHQLVYRKHMTARVLCDTHGSCATAGHMVRFRGRAMMMKSYCELVGNCERSITLVNSPRYTRALQIPSDSPDLTFTAFAARYATTAEEHVLRTAVHIGL 315          
BLAST of Gvermi5219.t1 vs. uniprot
Match: A0A2V3IN45_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN45_9FLOR)

HSP 1 Score: 135 bits (340), Expect = 5.120e-34
Identity = 109/320 (34.06%), Postives = 138/320 (43.12%), Query Frame = 0
Query:   23 AAEGFLAPCRADSDCRGSRQCRKVTSVELDDISADKLFASSSQSCDDDAEYCMCFPVSGVKGLTVCNEDDDCEEEGESCWEGP------------NVCAFQPQIEALEGVEEKGQDALCLSSKDCSSDRQCVRVSSIDILPLSICLAKLS--PP-------------------PSSAXXXXXXXXXXTSDDGEGGDSSE----------VCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTRSIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL 299
            AA    A CR  SDC  + QC  +               +SS  C   + YC C P + ++  T            E+C   P            +VC    Q++ ++          C S   C S   CV      IL  S C A  S  PP                   P +A           ++DG   +  E          VCIAA+SL HL  + LLY+KH+ ARVLCDA QSCAT GHMV Y G  MMM+TYC     C  ++M VNS RY+   ++ S T  L+F A AARY T  EEH+LRTAVR GL
Sbjct:   28 AASNSFARCRIQSDCTPNLQCISI---------------NSSTDCSQTSSYCACLPQT-IQQATCXXXXXX--XXXETCIPVPGRVSSVIKFPDVSVCVHNSQMDFVDLTP-------CSSVAGCPSHATCVT-----ILFFSFCAASSSAEPPITQSPAPEPSLEPEIPDSTPVAAPLHLEQDSPKQTEDGRDQEQREDQPDDIDGVPVCIAAKSLQHLPENMLLYSKHIPARVLCDAQQSCATPGHMVLYNGRPMMMRTYCQLVQ-CRSAVMPVNSVRYQWRWRLDSHTHGLSFLAFAARYQTRVEEHMLRTAVRVGL 316          
BLAST of Gvermi5219.t1 vs. uniprot
Match: A0A2V3IQ05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ05_9FLOR)

HSP 1 Score: 126 bits (316), Expect = 3.890e-31
Identity = 85/230 (36.96%), Postives = 114/230 (49.57%), Query Frame = 0
Query:   78 PVSGVKGLT--VCNEDDDCEEEGESCWEGPNVCAFQPQIEALEGVEEKGQDALCLSSKDCSSDRQ------CVRVSSIDILPLSICLAKLSPPPSSAXXXXXXXXXXTSDDGEGGDSSEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTRSIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL 299
            P     GLT   C  + DC + G  C     V     ++E  +  +  G +      KDCS          CV  S+    P   C +K +                 +       +S+VCIAA+SL+HL+  +L+Y +H  ARVLCD+  SCAT GH+V + G  MMM +YC     C   IM VNSPRY RA+++ S T  L FTA AARY T+ EEH+L TA+R GL
Sbjct:   34 PSVARNGLTGDSCKNNSDCSD-GRKCLLTNTVT----EVECADKADTIGCECRKSEMKDCSXXXXXXXXXXCVDSSNTSSQPF--CFSKKAAAKDDELTPVDGPTAPNASPA--AQTSDVCIAARSLAHLSQRDLVYARHRVARVLCDSSGSCATPGHIVLFHGVPMMMTSYCEAVS-CVAKIMHVNSPRYTRAVRVPSLTDGLQFTAFAARYQTTTEEHLLATAIRLGL 253          
BLAST of Gvermi5219.t1 vs. uniprot
Match: R7Q934_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q934_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 1.060e-29
Identity = 62/118 (52.54%), Postives = 83/118 (70.34%), Query Frame = 0
Query:  182 EGGDSSEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTRSIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL 299
            EG +  +VCI +++L HL   EL++ KH  ARV+CDA  SCAT GHMV Y GE MMM TYC + G C +  MLVNSP++++ +++ S T  L F ALAARYGT AEE+++  AV+ GL
Sbjct:  731 EGNEEDDVCIDSEALRHLGQRELVFLKHRWARVVCDASGSCATRGHMVMYEGETMMMGTYCEKVG-CEKRTMLVNSPKFKKGMRVNSKTSGLEFLALAARYGTKAEENMISFAVKLGL 847          
BLAST of Gvermi5219.t1 vs. uniprot
Match: R7Q4J5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4J5_CHOCR)

HSP 1 Score: 119 bits (297), Expect = 1.710e-29
Identity = 60/111 (54.05%), Postives = 75/111 (67.57%), Query Frame = 0
Query:  189 VCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTRSIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL 299
            VCI A +L HL  HEL+Y++HVS+RVLCDA  SCAT GH+VRY G+ MMMK YC R   C   I+ VNSPRY   +++ S T  L +T+ AARY +  EE  +  AVR GL
Sbjct:   44 VCIDAAALQHLQTHELVYSRHVSSRVLCDAFGSCATQGHIVRYAGKAMMMKNYC-RIVECEERIIKVNSPRYSIGMRVPSKTDGLEYTSFAARYESVVEEAAIAAAVRMGL 153          
BLAST of Gvermi5219.t1 vs. uniprot
Match: A0A2V3IFA6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFA6_9FLOR)

HSP 1 Score: 117 bits (292), Expect = 3.710e-26
Identity = 87/287 (30.31%), Postives = 121/287 (42.16%), Query Frame = 0
Query:   31 CRADSDCRGSRQCRKVTSVELDDI-SADKLFASSSQ-SCDDDAEYCMCFPVSGVKGLTVC-----------NEDDDCEEEGESC-----WEGPNVCAFQPQIEALEGVEEKGQDALCLSSKDCSSDRQCVRVSSIDILPLSICLAKLSPPPSSAXXXXXXXXXXTSDDGEGGDSSEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTRSIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL 299
            C A  DC+G R C ++   +L+   +A+  F  + + SC                   VC           +E   C E GES      + G + C  +        +E   +   C    +CSS+ +C     ID      C+ K                             EVCI+   L H+   E+ Y+ H  ARVLCD H SCATAGH+V Y    MMM TYC R G C + IM VN  RY+R   ++S++  L F+  +ARY T  EE +L  A+R GL
Sbjct:  207 CLATGDCKGPRTCAELRDGKLELCRNANSCFCLTEKISCXXXXXXXXXXXXXXXXXXXVCAARTLSLGPLVDEPTPCSEGGESLSIKDLFGGESPCRSRSTPTPASSIESPPK---CTGENECSSEEEC----RIDSNGAPRCIRK----------------------------KEVCISVHHLLHMNESEMTYSTHRLARVLCDEHNSCATAGHIVVYEAVPMMMSTYCNRVG-CVQKIMHVNGVRYQRGRMVSSNSKGLMFSTFSARYNTGIEEKLLGVAIRIGL 457          
BLAST of Gvermi5219.t1 vs. uniprot
Match: R7Q6G8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6G8_CHOCR)

HSP 1 Score: 109 bits (273), Expect = 6.990e-26
Identity = 56/111 (50.45%), Postives = 78/111 (70.27%), Query Frame = 0
Query:  189 VCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTRSIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL 299
            +C+ A++L++ A  +++Y KH  A+VLCD+ +SCATA HMV +RG  MMM++YC R   C  + + VNSPRY++ ++I S T  L FTA AARYGT AEE  +  AVR GL
Sbjct:   51 LCVDAEALTN-ADVQMVYRKHFYAKVLCDSERSCATAAHMVVWRGVAMMMRSYCQRVQ-CEETALHVNSPRYKKKVRIQSRTEGLQFTAFAARYGTKAEELAIGVAVRLGL 159          
BLAST of Gvermi5219.t1 vs. uniprot
Match: A0A2V3IF61_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF61_9FLOR)

HSP 1 Score: 108 bits (271), Expect = 2.070e-24
Identity = 57/111 (51.35%), Postives = 71/111 (63.96%), Query Frame = 0
Query:  189 VCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTRSIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL 299
            +CI+   LSHL   +L Y+ H  ARVLCD H SCATAGH+V Y    MMM +YC +T  C + IM VNS RY+R   + S++  L FTA AARY T  EE +L  A+R GL
Sbjct:  162 ICISVHHLSHLHGDDLRYSTHRLARVLCDKHNSCATAGHIVIYEAVPMMMSSYC-KTVRCVQKIMHVNSVRYKRRSVVQSNSKGLTFTAFAARYNTVLEEKLLGMAIRLGL 271          
BLAST of Gvermi5219.t1 vs. uniprot
Match: A0A2V3IE72_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE72_9FLOR)

HSP 1 Score: 99.0 bits (245), Expect = 9.220e-22
Identity = 54/111 (48.65%), Postives = 68/111 (61.26%), Query Frame = 0
Query:  189 VCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTRSIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL 299
            VC   ++ S    H+LL+ KH  A V CDA++SC T GHMV +RG+VMMM  YC    GC +  M VNSPR  R L+  S T  LA+T  AA++ T  EE VL  A+R GL
Sbjct:   52 VCEDVRAWSAFQSHQLLFEKHGMAWVFCDANESCTTDGHMVVFRGQVMMMNKYCD-IFGCEKRSMHVNSPRNTRGLRAQSRTGGLAYTVFAAKHETRMEEGVLLVAIRLGL 161          
BLAST of Gvermi5219.t1 vs. uniprot
Match: A0A2V3ISB7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISB7_9FLOR)

HSP 1 Score: 101 bits (252), Expect = 1.170e-21
Identity = 76/219 (34.70%), Postives = 102/219 (46.58%), Query Frame = 0
Query:   88 CNEDDDCEEEGESCWEGPN--VCAFQPQIEA-----LEGVEEKGQDALCLSSKDCSSDRQCVRVSSIDILPLSICLAKLSPPPSSAXXXXXXXXXXTSDDGEGGDSSEVCIAAQSLSHLAPHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTRSIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL 299
            C  DD+C E  ESC    N   CA    + A      E   EKG++     S D              ++P+     +L P P+                 EG   ++ C+A + L  L  +ELL+  H + +VLCD   SCATAGH+V YRG  M MK+YC   G C+ ++M VNSPRY   L++ S +  L  T  AAR+ T  EE  L   VR GL
Sbjct:   89 CFRDDECLEN-ESCQRFANSAACAAHSIVVANSIPQKETENEKGEEPAFEDSDD-------------SLVPI-----ELPPEPTIGVS-------------EGAVRADACVAVKHLQELERNELLFATHRTTKVLCDGKLSCATAGHIVVYRGLPMSMKSYCQHVG-CSMNMMEVNSPRYVWGLRMKSHSVELQLTVFAARFETMVEEAFLVCLVRLGL 274          
The following BLAST results are available for this feature:
BLAST of Gvermi5219.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IDX8_9FLOR1.900e-6043.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN45_9FLOR5.120e-3434.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQ05_9FLOR3.890e-3136.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q934_CHOCR1.060e-2952.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q4J5_CHOCR1.710e-2954.05Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IFA6_9FLOR3.710e-2630.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q6G8_CHOCR6.990e-2650.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IF61_9FLOR2.070e-2451.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IE72_9FLOR9.220e-2248.65Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3ISB7_9FLOR1.170e-2134.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..184
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:672057..672956 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5219.t1Gvermi5219.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 672057..672956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5219.t1 ID=Gvermi5219.t1|Name=Gvermi5219.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=300bp
MTFVASALLSAAFLAVLVSRAHAAEGFLAPCRADSDCRGSRQCRKVTSVE
LDDISADKLFASSSQSCDDDAEYCMCFPVSGVKGLTVCNEDDDCEEEGES
CWEGPNVCAFQPQIEALEGVEEKGQDALCLSSKDCSSDRQCVRVSSIDIL
PLSICLAKLSPPPSSAEANGDGDGEGTSDDGEGGDSSEVCIAAQSLSHLA
PHELLYTKHVSARVLCDAHQSCATAGHMVRYRGEVMMMKTYCARTGGCTR
SIMLVNSPRYRRALQIASDTPHLAFTALAARYGTSAEEHVLRTAVRFGL*
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