Gvermi5210.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5210.t1
Unique NameGvermi5210.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length390
Homology
BLAST of Gvermi5210.t1 vs. uniprot
Match: A0A2V3J7I6_9FLOR (Lysine-specific demethylase 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7I6_9FLOR)

HSP 1 Score: 412 bits (1059), Expect = 9.190e-140
Identity = 213/386 (55.18%), Postives = 286/386 (74.09%), Query Frame = 0
Query:    4 GDQNSEPRIQLLLQRVTKLVLSRKKQVEEELRACGRSRLARMVCRLPSLEPEQLEKIAMKDLPIASGALALAAASSCVVHATNRRLNDACRSADVALIMLGIPLGQPLLDFIILVEQDSLLDNSLFIEEGAVFAEDSDDDESIESSVMKDMNERCAEVVEKYFSVADFAKYFNNDEPVVIRKLASSWPSVQKWNDPTYLGNRYGHRTVPVEHTSSAGRMQERFCSIAEVVNMMTRKKGSAIQDNVYMAQHPILDYIPDMRDGIRTPPYLTVVGKTKADLVNMWIGSSGTGTKLHFDSADNILVQLVGRKKIVLIDAGQSELLYQRNPTDNISPVDITKPDLEKFPRFAEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFWF 389
             D + +  ++ +L+ VT LV+  K  VE+ELRACGRSRLAR+V +LP    +QL+++++ DLP A+ ALALAAASS ++ A     + A  +ADVALIMLG+PLGQPLLDFI L++++S++ +    +     +  +++ E +   + ++M E CAEV E +FS A F+++F +D+PVVIR+LA++WP+V+KW +P YL N YGHR VPVE++     ++ERF S+AEV++MMTR+  +   +NVYMAQHP+LDYIP +R  I  P Y+   GK  ADLVN+W+GS+GTGTKLHFDSADNILVQLVGRKK+VLID  QS LLY  +   NIS VD+  PD  KFPRF E  GMTVYLEPGDA+Y+PA YWHWVRAISSS+S+NFWF
Sbjct:    6 NDPSFQSSLESILRLVTDLVICYKHNVEKELRACGRSRLARLVDQLPLSNAKQLKQLSINDLPTANHALALAAASSSILDAKEHHFSSASENADVALIMLGLPLGQPLLDFIGLLQRNSVIHHLPASQSTGDVSFCTNEAERVNEEI-RNMAEPCAEVTEAHFSDAHFSEFFKHDKPVVIRQLAAAWPAVRKWINPLYLKNSYGHRIVPVEYSIPGAPIKERFASLAEVIDMMTRQSHTT--ENVYMAQHPLLDYIPALRKDISQPHYMKAAGKDTADLVNLWMGSAGTGTKLHFDSADNILVQLVGRKKLVLIDPKQSHLLYPTSSGANISTVDVENPDHTKFPRFCEARGMTVYLEPGDALYMPAHYWHWVRAISSSMSINFWF 388          
BLAST of Gvermi5210.t1 vs. uniprot
Match: R7QQI4_CHOCR (JmjC domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQI4_CHOCR)

HSP 1 Score: 187 bits (474), Expect = 7.810e-55
Identity = 80/154 (51.95%), Postives = 110/154 (71.43%), Query Frame = 0
Query:  236 MTRKKGSAIQDNVYMAQHPILDYIPDMRDGIRTPPYLTVVGKTKADLVNMWIGSSGTGTKLHFDSADNILVQLVGRKKIVLIDAGQSELLYQRNPTDNISPVDITKPDLEKFPRFAEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFWF 389
            M R    A    +YMAQHP+ DY+P + D +R P Y+ V GK++ADL N+W+G++G+G+ LHFDSADN+LVQ+VG K++VL+    S+ LY R    N+SPV +  PDL  FP F  VH   ++L PGDA+YIP  +WHWV++I++SISVNFWF
Sbjct:    1 MLRPPAEAAGRRLYMAQHPLFDYVPALEDDVRQPEYIRVAGKSRADLTNVWMGTAGSGSNLHFDSADNLLVQIVGEKRVVLVAPHFSKCLYPREERPNVSPVRVDAPDLHAFPLFRNVHAQVLHLRPGDALYIPPAHWHWVQSITASISVNFWF 154          
BLAST of Gvermi5210.t1 vs. uniprot
Match: A0A7S3UDF2_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UDF2_9CHLO)

HSP 1 Score: 165 bits (417), Expect = 4.310e-43
Identity = 96/238 (40.34%), Postives = 135/238 (56.72%), Query Frame = 0
Query:  167 SVADF-AKYFNNDEPVVIRKLASSWPSVQKWNDPTYLGNRYGHRTVPVE--HTSSAGRMQERFCSIAEVVN--MMTRKKGSAIQDNV-YMAQHPILDYIPDMRDGIRTPPY-LTVVGKTKADLVNMWIGSSGTGTKLHFDSADNILVQLVGRKKIVLIDAGQSELLYQRNPTD--------NISPVDITKPDLEKFPRFAEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFWF 389
            S  DF  KYF  D PVV++  A+ WP+ +KW   ++     G RT P+E  ++++A  + E   ++ E V   + T   G +  + V Y+AQH I D IP + D +  P   L   G  KA   N WIG++GT T LHFD+ DN+L Q+VG K + L    Q+  LY  +  D        NIS VD+  PD+ KFP  A+  G  V L PGD ++IP +YWH+VR++S S+SVNFWF
Sbjct:  205 SPEDFKTKYFKTDTPVVLKGRAAGWPAYEKWAKASFWVQTVGPRTFPIELDNSATAESLVEEPMTMQEFVQSYLQTDDAGKSSANKVAYLAQHDIFDRIPVLLDDVAVPEECLRCGGVEKA---NCWIGTAGTITPLHFDTYDNLLCQIVGYKYVKLFSREQTPYLYCESGKDFSSTRAQRNISAVDVENPDVAKFPEMAKAVGYDVVLSPGDVLFIPQRYWHYVRSLSPSVSVNFWF 439          
BLAST of Gvermi5210.t1 vs. uniprot
Match: C1C1Z9_CALCM (JmjC domain-containing protein 5 n=1 Tax=Caligus clemensi TaxID=344056 RepID=C1C1Z9_CALCM)

HSP 1 Score: 161 bits (407), Expect = 4.780e-42
Identity = 87/222 (39.19%), Postives = 128/222 (57.66%), Query Frame = 0
Query:  173 KYFNNDEPVVIRKLASSWPSVQKWNDPTYLGNRYGHRTVPVEHTS--SAGRMQERFCSIAEVVNMMTRKKGSAIQDNVYMAQHPILDYIPDMRDGIRTPPYLTVVGKTKADLVNMWIGSSGTGTKLHFDSADNILVQLVGRKKIVLIDAGQSELLYQRNPTD---NISPVDITKPDLEKFPRFAEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFWF 389
            KY     PV+I+ LA++WP+  KW+ P Y+ +  G+RTVP+E  S  + G   +R  +I   ++       S  Q   Y+AQH ++D + D+++ I TP Y    G+  ++ VN W G  GT + LH D   NIL Q+VG K + L D  Q++ LY  +  D   N S +DI  PD  +FP F    G+   LEPGDA+YIP + WH+V+++S S SV+FWF
Sbjct:  178 KYKETQTPVIIKGLANNWPARAKWSIP-YIRSIAGYRTVPIEIGSRYTDGNWTQRLMTINAFIDQFI---DSPSQTTGYLAQHNLMDQVSDLKEDIETPDYC-FSGEEDSEDVNFWFGPCGTVSPLHTDPKHNILTQVVGYKYVRLYDPDQTKYLYSYSEEDLMSNTSQIDIENPDFNEFPEFRHALGLQGILEPGDALYIPPKMWHYVKSLSLSFSVSFWF 394          
BLAST of Gvermi5210.t1 vs. uniprot
Match: A0A1E7FIB5_9STRA (Clavaminate synthase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FIB5_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.450e-39
Identity = 84/231 (36.36%), Postives = 123/231 (53.25%), Query Frame = 0
Query:  175 FNNDEPVVIRKLASSWPSVQKWNDPTYLGNRYGHRTVPVEHTSSAGRMQERFCSIAEVVNMMTRKKGS--------AIQDN---VYMAQHPILDYIPDMRDGIRTPPYLTVVGKTKADLVNMWIGSSGTGTKLHFDSADNILVQLVGRKKIVLIDAGQSELLYQRNPTD-----NISPVDITKPDLEKFPRFAEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFWF 389
            F+     VIR +AS WP+++KW     L   +GHR VP+E  S    M+E   +  + V+       +        AI D     Y+AQHP+LD IP +   I   P        +   +N+W+G+ GT T LHFDS DN+LVQLVG K + L D   S  LY    T      N+S +D  + D  + P   + +   V L PGD ++IPA++WH++R++S+S+SVN+WF
Sbjct:    6 FDQSIACVIRDVASEWPALRKWRAMDVLAREFGHRLVPIEIGSMTNGMEEAVVTFRQFVSKYLSTSSTKDCWSLDDAIMDRKSVAYIAQHPLLDQIPALCSDIDMNPC-----GVQPTNINIWMGTGGTRTPLHFDSYDNLLVQLVGAKYVRLYDRECSPQLYVSKDTSYGGQGNMSVLDCEREDYARHPLAKDTNYKEVLLYPGDCLFIPARHWHYIRSLSTSVSVNYWF 231          
BLAST of Gvermi5210.t1 vs. uniprot
Match: UPI001F501D8B (bifunctional peptidase and arginyl-hydroxylase JMJD5 isoform X1 n=2 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F501D8B)

HSP 1 Score: 154 bits (390), Expect = 1.690e-39
Identity = 85/229 (37.12%), Postives = 123/229 (53.71%), Query Frame = 0
Query:  171 FAKYFNNDEPVVIRKLASSWPSVQKWNDPTYLGNRYGHRTVPVE---HTSSAGRMQERFCSIAEVVNMMTRKKGSAIQDNVYMAQHPILDYIPDMRDGIRTPPYLTVVGKTKADL------VNMWIGSSGTGTKLHFDSADNILVQLVGRKKIVLIDAGQSELLY--QRNPTDNISPVDITKPDLEKFPRFAEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFW 388
            +A YF    PV I    S WP++++W D TYL  + G RTVPVE   H       Q +  ++   +    R   S  +D  Y+AQHP+ D IP+++D IR P Y  +  + K +       +N W G  GT T LH+D   N+L Q++G K+++L     S+ LY  +     N + VD   PD E FP + E+  M   L PG+ +YIP  +WH VRA+S+S SV+FW
Sbjct:  176 YAMYFKPLVPVKITGCMSHWPAMERWTDFTYLQAKAGARTVPVELGPHYLHPDWSQ-KLMTVGTFIKDYVRNPESG-KDVGYLAQHPLFDQIPELKDDIRIPDYCCLSSEDKNEEQSEDPDINAWFGPQGTVTPLHYDPKHNLLAQVIGEKRVLLYSPTDSDALYPPKSGLVTNTAQVDPEAPDYESFPLYKEISAMETVLLPGEMLYIPPGWWHHVRALSTSFSVSFW 402          
BLAST of Gvermi5210.t1 vs. uniprot
Match: A0A3Q7UHH4_VULVU (jmjC domain-containing protein 5 isoform X1 n=10 Tax=Canidae TaxID=9608 RepID=A0A3Q7UHH4_VULVU)

HSP 1 Score: 155 bits (393), Expect = 1.700e-39
Identity = 88/226 (38.94%), Postives = 128/226 (56.64%), Query Frame = 0
Query:  167 SVADFAKYFN-NDEPVVIRKLASSWPSVQKWNDPTYLGNRYGHRTVPVEHTSSAGRMQERFCSIAEVVNMMTRKKGSAIQDNVYMAQHPILDYIPDMRDGIRTPPYLTVVGKTKADL-VNMWIGSSGTGTKLHFDSADNILVQLVGRKKIVLIDAGQSELLY--QRNPTDNISPVDITKPDLEKFPRFAEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFW 388
            S+  F KYF     PV++  +A  WP +++W+   Y+    G RTVPVE   S    +E   ++  V   ++R   S  +D  Y+AQH + D IP++R  I  P Y  +    + ++ +N W G  GT + LH D   N LVQ++GRK I L    +SE LY  + +   N S VD+  PDL+KFPRFAE   ++  L PG+ ++IP QYWH+VRA+  S SV+FW
Sbjct:  232 SLEHFRKYFLVPGRPVILEGVADQWPCMKRWS-LEYIQEIAGCRTVPVE-VGSRYTDEEWSQTLMTVNEFISRHIRSEPKDVGYLAQHQLFDQIPELRQDISIPDYCCLGDGAEEEITINAWFGPQGTVSPLHQDPQQNFLVQVMGRKYIRLYSPQESEALYPHETHLLHNTSQVDVENPDLDKFPRFAEAPSLSCILSPGEILFIPLQYWHYVRALDLSFSVSFW 455          
BLAST of Gvermi5210.t1 vs. uniprot
Match: A0A6S7NT56_LACSI (JmjC domain-containing protein n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7NT56_LACSI)

HSP 1 Score: 150 bits (379), Expect = 3.980e-39
Identity = 79/219 (36.07%), Postives = 121/219 (55.25%), Query Frame = 0
Query:  174 YFNNDEPVVIRKLASSWPSVQKWNDPTYLGNRYGHRTVPVEHTSS--AGRMQERFCSIAEVVNMMTRKKGSAIQDNVYMAQHPILDYIPDMRDGIRTPPYLTVVGKTKADLVNMWIGSSGTGTKLHFDSADNILVQLVGRKKIVLIDAGQSELLYQRNPT--DNISPVDITKPDLEKFPRFAEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFW 388
            YF    PV++    + WP++ KWND  YL    G+RTVPVE   +      ++   + +E +  +            Y+AQHP+ D I ++R+ I TP Y    G T+   VN W G +GT T LH D   NIL Q+VG+K + L  A  SE LY    +   N S VD+   D+ +FP+  ++  +   LE G+ +YIP ++WH+VR++++S+SV+FW
Sbjct:   49 YFLPGSPVLLTDSMTHWPAITKWNDLNYLKKVAGYRTVPVEVGKNYLCNDWKQEMLTFSEFLERIQSNSCDDAHAPTYLAQHPLFDQIQELRNDIVTPDYC-FAGGTEMKSVNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYPASFSEELYPHTESMHKNSSQVDLDNIDVSEFPKIQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFW 266          
BLAST of Gvermi5210.t1 vs. uniprot
Match: A0A6B0V7F7_IXORI (JmjC domain-containing protein (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0V7F7_IXORI)

HSP 1 Score: 151 bits (381), Expect = 5.480e-39
Identity = 86/231 (37.23%), Postives = 128/231 (55.41%), Query Frame = 0
Query:  167 SVADFAK-YFNNDEPVVIRKLASSWP--SVQKWNDPTYLGNRYGHRTVPVE----HTSSAGRMQERFCSIAEVVNMMTRKKGSAIQDNVYMAQHPILDYIPDMRDGIRTPPYLTVVGKTKADLVNMWIGSSGTGTKLHFDSADNILVQLVGRKKIVLIDAGQSELLYQRNPT--DNISPVDITKPDLEKFPRFAEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFW 388
            S+  FAK Y N +EPV+I K  + WP  S + W+   YL  + G RTVP+E    +T  A    ++  +++  V+    KK S      Y+AQH I D IP++RD I  P Y  +  K +   +N+W G  GT + LH D  +N+L Q+ G K + L    ++  LY       +N S VD+  PDLEKFP FA        L+PG+ ++IP + WH+VR++S S+S++FW
Sbjct:   92 SLEHFAKEYLNKEEPVIITKGMNYWPALSTRPWSI-RYLLEKVGGRTVPIELGSKYTDEA--WSQKLMTVSAFVDRYILKKQSRDTQIGYLAQHQIFDQIPELRDDICIPTYCCLGEKDEEPDMNLWFGPEGTVSPLHHDPKNNLLAQVFGHKYVRLYKKEETPFLYPHEDRLLENTSQVDVENPDLEKFPSFANARYSECILKPGEMLFIPPKCWHFVRSLSPSLSISFW 319          
BLAST of Gvermi5210.t1 vs. uniprot
Match: A0A2R5GK36_9STRA (Lysine-specific demethylase 8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GK36_9STRA)

HSP 1 Score: 155 bits (392), Expect = 6.990e-39
Identity = 90/266 (33.83%), Postives = 136/266 (51.13%), Query Frame = 0
Query:  160 EVVEKYFSVADFAKYF---NNDEPVVIRKLASSWPSVQKWNDPTYLGNRYGHRTVPVEHTSSAGRMQERFCSIAEVVNMMTRKKGSAIQDNV-------YMAQHPILDYIPDMRDGIRTPPYLTVVGKTKADLVNMWIGSSGTGTKLHFDSADNILVQLVGRKKIVLIDAGQSELLYQRNPT--------------------------DNISPVDITKPDLEKFPRFAEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFWF 389
            EV++K  S+ D AKY    +    VVI+ +   WP++  W D  +  +RYG+R +PVE  S    M+E    + E +      +     +NV       Y+AQH +L+ +P++      P +    G T  D  ++W+G+  T T LH+DS DN L+Q+ G K +VL D  Q E LY    +                           N S VD+ KPDLEK+P++A+  G  V L+PGD +YIP   WH+VR+++ S+SVN+WF
Sbjct:  258 EVLDKP-SLEDLAKYCLPGDQGRAVVIKGMVDDWPALTTWCDLDFFVSRYGNRRIPVEIGSRLQSMKEEVTKLGEFLANYVAPRCRETAENVPAGEEVAYLAQHNLLEQLPELLRMAPMPRFCAYEGAT-LDASSVWLGTDETVTLLHYDSYDNFLIQVAGAKYVVLFDGSQFEELYVSKGSRSAQSSASTSTSKDVDEHDGEAFLAQGNTSAVDVGKPDLEKYPKYAKAQGKCVVLQPGDTLYIPQGMWHYVRSLTPSLSVNYWF 521          
The following BLAST results are available for this feature:
BLAST of Gvermi5210.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J7I6_9FLOR9.190e-14055.18Lysine-specific demethylase 8 n=1 Tax=Gracilariops... [more]
R7QQI4_CHOCR7.810e-5551.95JmjC domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S3UDF2_9CHLO4.310e-4340.34Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
C1C1Z9_CALCM4.780e-4239.19JmjC domain-containing protein 5 n=1 Tax=Caligus c... [more]
A0A1E7FIB5_9STRA1.450e-3936.36Clavaminate synthase-like protein n=1 Tax=Fragilar... [more]
UPI001F501D8B1.690e-3937.12bifunctional peptidase and arginyl-hydroxylase JMJ... [more]
A0A3Q7UHH4_VULVU1.700e-3938.94jmjC domain-containing protein 5 isoform X1 n=10 T... [more]
A0A6S7NT56_LACSI3.980e-3936.07JmjC domain-containing protein n=1 Tax=Lactuca sal... [more]
A0A6B0V7F7_IXORI5.480e-3937.23JmjC domain-containing protein (Fragment) n=1 Tax=... [more]
A0A2R5GK36_9STRA6.990e-3933.83Lysine-specific demethylase 8 n=1 Tax=Hondaea ferm... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003347JmjC domainSMARTSM00558cupin_9coord: 242..389
e-value: 2.9E-5
score: 30.0
IPR003347JmjC domainPROSITEPS51184JMJCcoord: 257..389
score: 26.100601
IPR041667Cupin-like domain 8PFAMPF13621Cupin_8coord: 171..389
e-value: 3.9E-44
score: 151.4
NoneNo IPR availableGENE3D2.60.120.650Cupincoord: 161..389
e-value: 6.8E-65
score: 220.9
NoneNo IPR availablePANTHERPTHR12461:SF38BIFUNCTIONAL PEPTIDASE AND ARGINYL-HYDROXYLASE JMJD5coord: 80..389
NoneNo IPR availablePANTHERPTHR12461HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATEDcoord: 80..389
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 165..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:614198..615367 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5210.t1Gvermi5210.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 614198..615367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5210.t1 ID=Gvermi5210.t1|Name=Gvermi5210.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=390bp
MEEGDQNSEPRIQLLLQRVTKLVLSRKKQVEEELRACGRSRLARMVCRLP
SLEPEQLEKIAMKDLPIASGALALAAASSCVVHATNRRLNDACRSADVAL
IMLGIPLGQPLLDFIILVEQDSLLDNSLFIEEGAVFAEDSDDDESIESSV
MKDMNERCAEVVEKYFSVADFAKYFNNDEPVVIRKLASSWPSVQKWNDPT
YLGNRYGHRTVPVEHTSSAGRMQERFCSIAEVVNMMTRKKGSAIQDNVYM
AQHPILDYIPDMRDGIRTPPYLTVVGKTKADLVNMWIGSSGTGTKLHFDS
ADNILVQLVGRKKIVLIDAGQSELLYQRNPTDNISPVDITKPDLEKFPRF
AEVHGMTVYLEPGDAVYIPAQYWHWVRAISSSISVNFWF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
IPR041667Cupin_8