Gvermi5168.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5168.t1
Unique NameGvermi5168.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length213
Homology
BLAST of Gvermi5168.t1 vs. uniprot
Match: A0A2V3J951_9FLOR (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J951_9FLOR)

HSP 1 Score: 285 bits (729), Expect = 8.250e-94
Identity = 142/212 (66.98%), Postives = 161/212 (75.94%), Query Frame = 0
Query:    1 MYDTLVRDAPSFAPAYSNRANILVARRNFADAERDYDRALTLAPLDSDAWLVFVNRGATRLAMGRNDDALADLNQAYRLRGDDYTVLXXXXXXXXXXXXXXXXXXXYQNALKSNDVQPFWIRYALVLFQRNKSFEAISILKRVAARFPDVNDVHAALALVYYDRGDLAAAETEWSAVDRPRLFESQSFLSQERKWPPRAIATLNNFRHLNPQ 212
            +Y+ LV  AP+FAPAYSNRANILVAR  + DA  DYD +L LAPLD+DAW+V VNRGAT LAMG    AL D+N A+ LRGDD TV+                   YQ AL+SNDVQPFWIRYAL LFQRNKS EA++ILKRVAARFP  NDVH A+ALVYYDR D AAAETEWSAVDRP+LFE++ FL  ERKWPPRA+ TLNNFR+LNPQ
Sbjct:   94 LYNQLVEQAPNFAPAYSNRANILVARGRYQDARTDYDTSLRLAPLDTDAWVVHVNRGATYLAMGDASAALDDMNVAHELRGDDPTVMSNRAAVYEVLGKWDNAIRDYQKALRSNDVQPFWIRYALALFQRNKSVEALAILKRVAARFPGFNDVHVAMALVYYDRNDFAAAETEWSAVDRPKLFENERFLRDERKWPPRAVETLNNFRNLNPQ 305          
BLAST of Gvermi5168.t1 vs. uniprot
Match: R7QMM9_CHOCR (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMM9_CHOCR)

HSP 1 Score: 240 bits (612), Expect = 4.040e-75
Identity = 123/209 (58.85%), Postives = 149/209 (71.29%), Query Frame = 0
Query:    2 YDTLVRDAPSFAPAYSNRANILVARRNFADAERDYDRALTLAPLDSDAWLVFVNRGATRLAMGRNDD---ALADLNQAYRLRGDDYTVLXXXXXXXXXXXXXXXXXXXYQNALKSNDVQPFWIRYALVLFQRNKSFEAISILKRVAARFPDVNDVHAALALVYYDRGDLAAAETEWSAVDRPRLFESQSFLSQERKWPPRAIATLNNFR 207
            YD + +  P FAPAYSNR NI  A++ F  A  +YDR+L LAPLD+D+W+VFVNRG T+LA G  DD   ALAD+N A  LR  +  +L                   YQ AL+SNDVQPFW RY LVLFQRNKS+EA+SILKRVA RF DV+DVHAA+A++Y+DRGD+A AET+WS VDRPRLFES+ FL  ERKWPPRA+  + NFR
Sbjct:  170 YDAITKSDPDFAPAYSNRGNIFAAQKKFDQAITEYDRSLELAPLDNDSWVVFVNRGVTKLARG--DDPYIALADMNIANELRAGNDIILSNRAGVWEVMGKWDNAIRDYQAALQSNDVQPFWERYGLVLFQRNKSYEALSILKRVATRF-DVSDVHAAMAVIYFDRGDIAEAETQWSLVDRPRLFESKKFLVSERKWPPRAVEAMENFR 375          
BLAST of Gvermi5168.t1 vs. uniprot
Match: M2X3Y3_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X3Y3_GALSU)

HSP 1 Score: 161 bits (407), Expect = 1.270e-44
Identity = 77/208 (37.02%), Postives = 129/208 (62.02%), Query Frame = 0
Query:    1 MYDTLVRDAPSFAPAYSNRANILVARRNFADAERDYDRALTLAPLDSDAWLVFVNRGATRLAMGRNDDALADLNQAYRLRGDDYTVLXXXXXXXXXXXXXXXXXXXYQNALKS--NDVQPFWIRYALVLFQRNKSFEAISILKRVAARFPDVNDVHAALALVYYDRGDLAAAETEWSAVDRPRLFESQSFLSQERKWPPRAIATLNNF 206
            +Y  L+++ P+FAPAYSN ANI +    ++ A  +Y RAL LAPL +D W+V++NR  T +A+   + A+AD+ QA + +  D  +L                   +QNA++S  N+VQPFW  Y ++LF+++KSFEA SI+ RVA ++P ++D+H  LA + Y  G++  AE++W  V+ P+++ +  F+ +E+ WPP+    + +F
Sbjct:  147 LYQQLIQEEPTFAPAYSNLANIQIIFGKYSQAITNYTRALELAPLSNDTWIVYLNRANTWIALRDIEKAMADIEQAAQWKPKDSLILSTRALLFAYEGKWDEAFLEFQNAVESRPNEVQPFWFNYGMLLFEKSKSFEARSIIYRVAQKYPKLSDIHVVLAGIEYAEGNIQTAESQWKLVEHPKIY-THIFIEREKIWPPKVKQAVESF 353          
BLAST of Gvermi5168.t1 vs. uniprot
Match: A0A5J4Z8P3_PORPP (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8P3_PORPP)

HSP 1 Score: 155 bits (391), Expect = 6.150e-43
Identity = 87/212 (41.04%), Postives = 119/212 (56.13%), Query Frame = 0
Query:    2 YDTLVRDAPSFAPAYSNRANILVARRNFADAERDYDRALTLAPLDSDAWLVFVNRGATRLAMGRNDDALADLNQAYRLRGDDYTVLXXXXXXXXXXXXXXXXXXXYQNAL--KSNDVQPFWIRYALVLFQRNKSFEAISILKRVAARFPDVNDVHAALALVYYDRGDLAAAETEWSAVDRPRLFESQSFLSQERKWPPRAIATLNNFRHLNP 211
            Y  L + +P+FA AYSNR N+ VA + + +A  DY RAL LAPL SD+++V V                         R D+  V                    YQ A+  K NDV+PFW+ YA+VL+Q NK  EA+ ++KRVAA++  V+DV+AAL+++YYD+ DL  AE  W AV RPRLF S++FL + R W PR + TL  F+ L P
Sbjct:   84 YSELAQSSPNFAGAYSNRGNVYVALKKYEEAVADYTRALELAPLASDSYVVLVXXXXXXXXXXXXXXXXXXXXXXXXXRPDESLVYVNRATLLARQQKWTSALNDYQRAVEKKPNDVEPFWLDYAMVLYQINKPGEALGVVKRVAAKYGTVDDVNAALSVMYYDKNDLPDAEGAWGAVARPRLFTSKAFL-EGRHWTPRMLETLARFQKLTP 294          
BLAST of Gvermi5168.t1 vs. uniprot
Match: A0A7S1TIT0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIT0_9RHOD)

HSP 1 Score: 151 bits (381), Expect = 2.770e-40
Identity = 100/212 (47.17%), Postives = 133/212 (62.74%), Query Frame = 0
Query:    1 MYDTLVRDAPSFAPAYSNRANILVARRNFADAERDYDRALTLAPLDSDAWLVFVNRGATRLAMGRNDDALADLNQAYRLRGDDYTVLXXXXXXXXXXXXXXXXXXXYQNALKS--NDVQPFWIRYALVLFQRNKSFEAISILKRVAARFPDVNDVHAALALVYYDRGDLAAAETEWSAVDRPRLFESQSFLSQERKWPPRAIATLNNFRHLN 210
            +Y  ++  A +FAPAYSNR N+ V    + DA  DY RAL LAP+  DAW+++                          R  D  VL XXXXXXXXXXXXXXXXXX         N+V+PFW  YAL+LFQR++SFEA  +L+RVAAR+P+  +V AALA V +DR +LA AE+ WS ++RPRL +S++FL +E  WPPRAI+ +  F+ L+
Sbjct:  204 LYSKVIEAATTFAPAYSNRGNVRVVAHRYEDALDDYTRALNLAPVADDAWVIYXXXXXXXXXXXXXXXXXXXXXXXXXXRPGDPLVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXNEVEPFWFSYALILFQRDRSFEAAGLLRRVAARYPNQPEVRAALAAVLFDRNELAEAESNWSVIERPRLVQSKNFL-KEHGWPPRAISAMEKFKTLS 414          
BLAST of Gvermi5168.t1 vs. uniprot
Match: D7FQV0_ECTSI (TPR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV0_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 7.740e-32
Identity = 72/213 (33.80%), Postives = 113/213 (53.05%), Query Frame = 0
Query:    1 MYDTLVRDAPSFAPAYSNRANILVARRNFADAERDYDRALTLAP--LDSDAWLVFVNRGATRLAMGRNDDALADLNQAYRLR-GDDYTVLXXXXXXXXXXXXXXXXXXXYQNAL--KSNDVQPFWIRYALVLFQRNKSFEAISILKRVAARFPDVNDVHAALALVYYDRGDLAAAETEWSAVD--RPRLFESQSFLSQERKWPPRAIATLNNF 206
            +Y+ +V+ AP +   +SNRAN+L+A  +   A  DYDRAL LA      D W++++NR                LNQA +L    D   L                   Y+ A+  +  +VQP+WIRY+LVLFQ  + F++++ LKRV A+F  V +V AA+  + + RGD+ AAE  W  ++    +++   S+L  + KWPPR + +L +F
Sbjct:  194 LYNQVVKYAPGYVYGWSNRANVLIAEGDLKAAVSDYDRALQLAEGIYMPDKWIIYLNRXXXXXXXXXXXXXXXXLNQAAKLNTSKDLYTLANRAQAFERRGDWAKALADYEGAINVQPGNVQPWWIRYSLVLFQEGRDFDSLAFLKRVQAKFEGVGEVQAAMTAIEFGRGDMKAAEGAWRGINIVDQQMYLKDSYLKDQLKWPPRVVESLKSF 406          
BLAST of Gvermi5168.t1 vs. uniprot
Match: A0A0M0JQK7_9EUKA (Tetratricopeptide repeat protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQK7_9EUKA)

HSP 1 Score: 124 bits (311), Expect = 2.850e-30
Identity = 74/210 (35.24%), Postives = 110/210 (52.38%), Query Frame = 0
Query:    9 APSFAPAYSNRANILVARRNFADAERDYDRALTLAPLDSDAWLVFVNRGATRLAMGRNDDALADLNQAYRLRGDDYTVLXXXXXXXXXXXXXXXXXXXYQNALKSN--DVQPFWIRYALVLFQ-RNKSFEAISILKRVAARFPDVNDVHAALALVYYDRG---DLAAAETEWSAVDRPRLFESQSFLSQERKWPPRAIATLNNFRHLNPQ 212
            AP++  AY+NRAN+ VAR N+  A  DY+ AL LAPL  DAW+ ++N GAT +A  R  +AL ++ +A R+  DD   L                   +  AL+ N  D+QPFWIRYAL LF+ R +  EA+ I++RVAA++    +   A   + +D G   +   A   W+           +   + ++WPP A+   NNFR   P+
Sbjct:  126 APNYYGAYANRANVRVARGNYVGAVADYEAALRLAPLAKDAWITYLNLGATLIAADRAPEALDNMERAVRMSKDDRLALLGRGNAYHALGKWGAAAADHGAALEKNPSDIQPFWIRYALELFEARERRPEALGIIRRVAAKYDLEPEAQLAACSMLWDGGNELEQQEALRRWNYAPLTTRRSMATLDVRSKQWPPTALLAANNFRAAAPE 335          
BLAST of Gvermi5168.t1 vs. uniprot
Match: A0A7S2SDF4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDF4_9STRA)

HSP 1 Score: 119 bits (297), Expect = 3.490e-29
Identity = 77/222 (34.68%), Postives = 117/222 (52.70%), Query Frame = 0
Query:    1 MYDTLVRDAPSFAPAYSNRANILVARRNFADAERDYDRALTL------APLDSDAWLVFVNRGATRLAMGRND-DALADLNQAYRLR-GDDYTVLXXXXXXXXXXXXXXXXXXXYQNAL--KSNDVQPFWIRYALVLFQRNKSFEAISILKRVAARFPDVNDVHAALALVYYDRGDLAAAETEW---SAVDRPRLFESQSFLSQERKWPPRAIATLNNFRHL 209
            +Y  ++   PS+  A+SNR N+ V R +   A +DYD+A+ L      A L+ +AWLV++NRG TRLA+G +   AL DLN A  +R   D  +L                   YQ AL  K NDV+P+W+R++LVLFQ  +  +A+++ +RV ++F    +V  ALA +  D   L  A   W    ++ R R +   +FL    +WPPRA++       L
Sbjct:   49 LYSKIIELEPSYPYAFSNRGNLDVLRGDLRLALQDYDQAVELLSAESSARLNGEAWLVYLNRGTTRLALGDDPKQALVDLNLAAAIRRSPDTLLLTSRAQAYERLGDWASAAADYQAALSLKPNDVEPWWLRFSLVLFQLGRDVDAVALARRVRSKFSGEAEVGIALACMLVDARQLTEATKLWFDQPSIQRQR-YSDVAFLETAVRWPPRAVSVAKGLGRL 269          
BLAST of Gvermi5168.t1 vs. uniprot
Match: A0A7S4ETF5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETF5_CHRCT)

HSP 1 Score: 118 bits (295), Expect = 2.470e-28
Identity = 70/207 (33.82%), Postives = 106/207 (51.21%), Query Frame = 0
Query:    9 APSFAPAYSNRANILVARRNFADAERDYDRALTLAPLDSDAWLVFVNRGATRLAMGRNDDALADLNQAYRLRGDDYTVLXXXXXXXXXXXXXXXXXXXYQNALKSN--DVQPFWIRYALVLFQRNKSFEAISILKRVAARFPDVNDVHAALALVYYDRG---DLAAAETEWSAVDRPRLFESQSFLSQE----RKWPPRAIATLNNF 206
            AP++A  Y+NRAN+ VAR +   A RDYD AL L P  +  W+  +NRGATR A+G  + AL+DL +A RL   D   L                   Y   +     DVQPFW+RYA+ LF+ ++  EA+ I++RVA +F    +   A + + +  G   + + A   W  +       S +F+ ++    R+WPP+A+A    F
Sbjct:  126 APNYADGYANRANVRVARGDLEGAVRDYDTALQLVPRGNSVWVNLLNRGATRSALGDTELALSDLQEAVRLSQGDKLALLGRGSVLHKLGRYAEAASDYGAVVNKRPLDVQPFWLRYAIDLFEADRRLEALGIVRRVANKFDLEPECTLAASSMLWSGGTDTERSEAMLRWKQLPAQMRTRSLAFVDEKTFSAREWPPKAVAAAEEF 332          
BLAST of Gvermi5168.t1 vs. uniprot
Match: M1V9U6_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V9U6_CYAM1)

HSP 1 Score: 119 bits (298), Expect = 1.070e-27
Identity = 93/225 (41.33%), Postives = 132/225 (58.67%), Query Frame = 0
Query:    1 MYDTLVRDAPSFAPAYSNRANILVARRNFADAERDYDRALTL--------------------AP-LDSDAWLVFVNRGATRLAMGRNDDALADLNQAYRLRGDDYTVLXXXXXXXXXXXXXXXXXXXYQNALKS--NDVQPFWIRYALVLFQRNKSFEAISILKRVAAR--FPDVNDVHAALALVYYDRGDLAAAETEWSAVDRPRLFESQSFLSQERKWPPRAI 200
            +Y ++V   P    AY+NRAN+      +  A  DY +A+ L                    AP L+ + W++++NR      + R+ +AL D+N+A  +R  +  +LXXXXXXXXXXXXXXXXXXX          DVQPFW+ YAL LFQR +  +A+ I++RVA++  F   ++V AA A++ YDRG L+ AE  W A+ RPR F+ ++FL  ER WPPRAI
Sbjct:  298 IYASVVDREPGLVWAYANRANLYSRLGQYDQALADYTQAIRLLCKTVSGNESTGDERLTDADAPCLERELWVLYLNRATVYRTLRRHQEALRDMNRALSIRPYEPLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDVQPFWVDYALTLFQRGRDTDALGIMRRVASKPSFAQSDEVKAAYAVLLYDRGMLSDAEGLWGALQRPRRFQDENFLRNERHWPPRAI 522          
The following BLAST results are available for this feature:
BLAST of Gvermi5168.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J951_9FLOR8.250e-9466.98UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
R7QMM9_CHOCR4.040e-7558.85TPR repeat-containing protein n=1 Tax=Chondrus cri... [more]
M2X3Y3_GALSU1.270e-4437.02Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A5J4Z8P3_PORPP6.150e-4341.04UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
A0A7S1TIT0_9RHOD2.770e-4047.17Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
D7FQV0_ECTSI7.740e-3233.80TPR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A0M0JQK7_9EUKA2.850e-3035.24Tetratricopeptide repeat protein n=1 Tax=Chrysochr... [more]
A0A7S2SDF4_9STRA3.490e-2934.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4ETF5_CHRCT2.470e-2833.82Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
M1V9U6_CYAM11.070e-2741.33Uncharacterized protein n=2 Tax=cellular organisms... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 50..83
e-value: 0.48
score: 19.5
coord: 13..46
e-value: 1.2E-4
score: 31.4
coord: 84..117
e-value: 0.0011
score: 28.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 13..46
score: 9.0274
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 13..44
e-value: 3.4E-5
score: 23.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 50..115
e-value: 1.4E-14
score: 55.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..49
e-value: 1.5E-8
score: 36.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 116..212
e-value: 4.0E-6
score: 28.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 10..175
NoneNo IPR availablePFAMPF13432TPR_16coord: 124..174
e-value: 5.6E-5
score: 23.6
coord: 60..111
e-value: 2.3E-4
score: 21.6
NoneNo IPR availablePANTHERPTHR44858:SF8SUBFAMILY NOT NAMEDcoord: 13..208
NoneNo IPR availablePANTHERPTHR44858TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 13..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:496140..496778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5168.t1Gvermi5168.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 496140..496778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5168.t1 ID=Gvermi5168.t1|Name=Gvermi5168.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=213bp
MYDTLVRDAPSFAPAYSNRANILVARRNFADAERDYDRALTLAPLDSDAW
LVFVNRGATRLAMGRNDDALADLNQAYRLRGDDYTVLSNRATVYEALGKW
DNAIRDYQNALKSNDVQPFWIRYALVLFQRNKSFEAISILKRVAARFPDV
NDVHAALALVYYDRGDLAAAETEWSAVDRPRLFESQSFLSQERKWPPRAI
ATLNNFRHLNPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR013105TPR_2
IPR011990TPR-like_helical_dom_sf