Gvermi5160.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5160.t2
Unique Name	Gvermi5160.t2
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	211

Homology

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BLAST of Gvermi5160.t2 vs. uniprot
Match: A0A2V3J6S5_9FLOR (T-complex protein 1 subunit zeta 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6S5_9FLOR)

HSP 1 Score: 384 bits (987), Expect = 7.490e-130
Identity = 183/210 (87.14%), Postives = 205/210 (97.62%), Query Frame = 0

Query:    1 MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPFSCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHAHLKKFANKSITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEENAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDEILRAGRDTTR 210
            MERIT+ACGGIP+NSVEGLT++DLG+AGAVYEEVHED+KYTFVE+VKNPFSCTVL+RGPNKHTITQMKDAVRDGLRAVKNT+EDQCVLPGAGAFE+AA +HLKK+AN+ +TGKTKLGV AFAEALLVIPKTLAETSGHDALDCIIK+EEE ++GHFAGL+LATG+PLDP ASGIYDNY+VKRQ++GLASIISTQLLLVDEILRAGRDTTR
Sbjct:  320 MERITLACGGIPMNSVEGLTVEDLGYAGAVYEEVHEDEKYTFVEQVKNPFSCTVLLRGPNKHTITQMKDAVRDGLRAVKNTLEDQCVLPGAGAFEVAAQSHLKKYANEKVTGKTKLGVIAFAEALLVIPKTLAETSGHDALDCIIKMEEEASRGHFAGLNLATGDPLDPTASGIYDNYVVKRQLIGLASIISTQLLLVDEILRAGRDTTR 529

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BLAST of Gvermi5160.t2 vs. uniprot
Match: R7QDI5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDI5_CHOCR)

HSP 1 Score: 349 bits (895), Expect = 6.040e-116
Identity = 172/210 (81.90%), Postives = 188/210 (89.52%), Query Frame = 0

Query:    1 MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPFSCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHAHLKKFANKSITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEENAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDEILRAGRDTTR 210
            MER+T+ACGG+PVNS EGLT D LGFAG VYEEVHED+KYTFVE VK+PFSCTVL+RGPNKHTITQMKDAVRDGLRAVKNT+ED CVLPGAG FEIAA+ HL+++A  S+TGKTKLGV AFAEAL V+PKTLAETSGHDALD IIKLEE  AKG   GLDLATGEPLDP ASGIYDNYIVKRQM+ LA +ISTQLLLVDEILRAGRD +R
Sbjct:  320 MERVTLACGGLPVNSEEGLTPDVLGFAGIVYEEVHEDEKYTFVENVKDPFSCTVLLRGPNKHTITQMKDAVRDGLRAVKNTIEDGCVLPGAGGFEIAAYRHLRQYAESSVTGKTKLGVVAFAEALQVVPKTLAETSGHDALDSIIKLEEGCAKGDVVGLDLATGEPLDPKASGIYDNYIVKRQMVALAGVISTQLLLVDEILRAGRDASR 529

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BLAST of Gvermi5160.t2 vs. uniprot
Match: A0A5J4Z5Z8_PORPP (T-complex protein 1 subunit zeta 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5Z8_PORPP)

HSP 1 Score: 285 bits (729), Expect = 7.080e-91
Identity = 135/210 (64.29%), Postives = 174/210 (82.86%), Query Frame = 0

Query:    1 MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPFSCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHAHLKKFANK-SITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEENAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDEILRAGRDTT 209
            MER+ +ACGG  VNSVE LT  DLG+AG V+E+   +DK+TF+E+V+NP+SCT+L++GPNKHTI Q+KDAVRDGLRAVK T+ED CVLPG G FE+AA  HL+  A+  +I GKTKLG+ AFA+ALL+IPKTLAE +GHDA DC+++L++E A G   GLD+ TGEP+DP A+G++D Y+VK+QML L+SII+ QLLLVDEILRAGRD +
Sbjct:  322 MERLALACGGNAVNSVEELTESDLGYAGNVFEQTLGEDKFTFIEDVENPYSCTLLLKGPNKHTIMQLKDAVRDGLRAVKLTIEDNCVLPGGGCFEVAASRHLRALADGGNIPGKTKLGIYAFADALLIIPKTLAENAGHDAQDCVMRLQDEQAAGKMVGLDVNTGEPMDPVATGVFDGYLVKKQMLSLSSIIAEQLLLVDEILRAGRDVS 531

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BLAST of Gvermi5160.t2 vs. uniprot
Match: A0A1X6NLK8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLK8_PORUM)

HSP 1 Score: 275 bits (702), Expect = 6.600e-87
Identity = 133/210 (63.33%), Postives = 168/210 (80.00%), Query Frame = 0

Query:    1 MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPFSCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHAHLKKFANKSITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEENAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDEILRAGRDTTR 210
            MER+++ACGG+ V+SV+ LT D LGFAG+VYE+V  ++KYTFVE V+NPFSCT+L+ GPN+HT+ QMKDAVRDGLRAVKN ++D CV+ G GA E+AA  HL     K + GK KLG+ A+AEALLV+PK LA+ SG DA D I+KL+E    G   GLDL TGEP+D  A+GIYDNYIVK+Q++GLAS+I++QLLLVDEILRAGRD  +
Sbjct:  319 MERLSLACGGVAVSSVDDLTEDVLGFAGSVYEQVLAEEKYTFVEGVRNPFSCTLLLTGPNRHTLVQMKDAVRDGLRAVKNAIDDGCVVAGGGALEVAAWRHLTTEVAKQVKGKAKLGLQAYAEALLVVPKVLAQNSGFDAQDVIVKLQEAADTGSALGLDLGTGEPVDVVAAGIYDNYIVKKQLVGLASVIASQLLLVDEILRAGRDVNK 528

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BLAST of Gvermi5160.t2 vs. uniprot
Match: M2XHC0_GALSU (T-complex protein 1 subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XHC0_GALSU)

HSP 1 Score: 271 bits (694), Expect = 1.190e-85
Identity = 126/207 (60.87%), Postives = 172/207 (83.09%), Query Frame = 0

Query:    1 MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPFSCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHAHLKKFANKSITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEENAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDEILRAGRD 207
            MER+T+ACGG+ VNS++ L  + LG+AG VYE++  ++KYTF+E+V+NPFSCT+LI+ PNKH+I Q+KDAVRDGLRAVKNT+ED C LPGAGAFE+AA  +L ++ +KS++G+ +LGV  FA+ALL +PKTLAE SG +A + I+KL+ E+ KGH  G+D+ TG P+DP   GIYD++ VK+Q+L L+S+I++QLLLVDEILRAGRD
Sbjct:  320 MERLTLACGGVAVNSLDELMPEVLGYAGHVYEQILGEEKYTFIEDVENPFSCTILIKAPNKHSINQIKDAVRDGLRAVKNTIEDNCFLPGAGAFEVAASEYLHEY-SKSVSGRARLGVICFADALLTVPKTLAENSGFEAQEVILKLQSEHQKGHMVGVDVETGNPIDPVMMGIYDSFAVKKQLLNLSSMIASQLLLVDEILRAGRD 525

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BLAST of Gvermi5160.t2 vs. uniprot
Match: A0A446WT14_TRITD (Uncharacterized protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446WT14_TRITD)

HSP 1 Score: 261 bits (667), Expect = 4.980e-85
Identity = 128/207 (61.84%), Postives = 162/207 (78.26%), Query Frame = 0

Query:    1 MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPFSCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHAHLKKFANKSITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEENAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDEILRAGRD 207
            MER+ +ACGG  +NSVEG+T D LG+AG VYE V  ++KYTFVE VKNP SCT+LI+GPN HTI Q+KDAVRDGLR+VKNT+ED+ V+ GAGAFE+AA  HL     K++ G+ +LGV AFA+ALLVIPKTLAE SG D  D I+ LE E+ +G   GL+  +GEP+DP   GIYDNY+VKRQ++    II++QLLLVDE++RAGR+
Sbjct:   52 MERLVLACGGEAINSVEGMTEDCLGWAGLVYEHVLGEEKYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTVEDEAVVLGAGAFEMAARKHLIDNVKKTVKGRAQLGVGAFADALLVIPKTLAENSGLDTQDVIVSLENEHDRGLVVGLNHNSGEPVDPEMEGIYDNYLVKRQIVNSGPIIASQLLLVDEVIRAGRN 258

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BLAST of Gvermi5160.t2 vs. uniprot
Match: A0A8J4Q2J2_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q2J2_9MYCE)

HSP 1 Score: 268 bits (686), Expect = 2.300e-84
Identity = 129/206 (62.62%), Postives = 168/206 (81.55%), Query Frame = 0

Query:    1 MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPFSCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHAHLKKFANKSITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEENAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDEILRAGR 206
            MER+T+ACGG  +NSV+ L+ D LG A  VYE    ++KYTFVE VKNPFSCT+LI+GPNKHTI Q+KDA+RDGLRAVKNT+ED CV+PG GAF+IAA+A L KF + ++ G+TKLGV AFA+ALL++PKTLAE SG D++D II+L+EE +KGH  GLD+ TGEP+DP + GI+D Y V +Q+   + II++QLLLVDEI++AG+
Sbjct:  322 MERLTLACGGTAMNSVDDLSPDCLGHADVVYEHTLGEEKYTFVEGVKNPFSCTILIKGPNKHTIEQIKDALRDGLRAVKNTIEDGCVIPGGGAFQIAAYADLMKFKD-TVVGRTKLGVQAFADALLIVPKTLAENSGFDSMDAIIRLQEEYSKGHIVGLDVVTGEPMDPFSEGIFDQYSVLKQIYRSSPIIASQLLLVDEIIKAGK 526

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BLAST of Gvermi5160.t2 vs. uniprot
Match: Q8T5T4_PHYPO (Chaperonin containing TCP-1 zeta subunit n=1 Tax=Physarum polycephalum TaxID=5791 RepID=Q8T5T4_PHYPO)

HSP 1 Score: 268 bits (684), Expect = 4.820e-84
Identity = 130/207 (62.80%), Postives = 167/207 (80.68%), Query Frame = 0

Query:    1 MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPFSCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHAHLKKFANKSITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEENAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDEILRAGRD 207
            MER+T+ACGG P+NSV+ LT D LG A  VYE+V  +DKYTFVE V+NPFSCT+LI+GPNKHTI Q+KDAVRDGLRAVKNT+EDQ V+PGAGAFE+A H  + KF ++ + G+ KLGV A+A+ALL++PK LAE SG D ++ IIKL+EE AKGH  GLDL +GEP+DP   GI+D Y   RQ+L  +S+++TQ+LLVDEI++AG+ 
Sbjct:  324 MERLTLACGGSPMNSVDDLTPDVLGKADIVYEQVLGEDKYTFVEGVRNPFSCTILIKGPNKHTIEQIKDAVRDGLRAVKNTIEDQLVVPGAGAFELACHRDILKFKDE-VHGRAKLGVQAYADALLIVPKVLAENSGFDPIETIIKLQEEFAKGHVVGLDLISGEPMDPVQEGIWDQYRAIRQILHSSSVVATQILLVDEIMKAGKS 529

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BLAST of Gvermi5160.t2 vs. uniprot
Match: TCPZ_DICDI (T-complex protein 1 subunit zeta n=3 Tax=Dictyostelium TaxID=5782 RepID=TCPZ_DICDI)

HSP 1 Score: 267 bits (683), Expect = 6.140e-84
Identity = 129/206 (62.62%), Postives = 168/206 (81.55%), Query Frame = 0

Query:    1 MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPFSCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHAHLKKFANKSITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEENAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDEILRAGR 206
            MER+T+ACGG  +NS+E LT D LG A  VYE+   ++KYTFVE VKNPFSCTVLI+GP KH I Q+KDA+RDGLRAVKNT+ED+CV+PG GAF+IAA+A L KF  ++ITG+TKLG+ AFA+ALLV+PKTLA+ SG D +D IIKL+EE AKGH  GLD+ +GEP+DP + GI+D Y V +Q+   + +I++QLLL+DEI++AG+
Sbjct:  323 MERLTLACGGTAMNSLEDLTPDCLGHADLVYEQTLGEEKYTFVEGVKNPFSCTVLIKGPTKHQIEQIKDALRDGLRAVKNTIEDKCVVPGGGAFQIAAYADLMKF-KETITGRTKLGIQAFADALLVVPKTLAQNSGFDPMDTIIKLQEEYAKGHIVGLDVESGEPMDPVSEGIFDQYSVLKQVYRSSPVIASQLLLIDEIIKAGK 527

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BLAST of Gvermi5160.t2 vs. uniprot
Match: D5A7V5_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5A7V5_PICSI)

HSP 1 Score: 261 bits (666), Expect = 8.700e-84
Identity = 126/207 (60.87%), Postives = 162/207 (78.26%), Query Frame = 0

Query:    1 MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPFSCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHAHLKKFANKSITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEENAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDEILRAGRD 207
            MER+ +ACGG  VNSV+ LT D LG+AG VYE V  ++KYTFVE V+NP SCT+LI+GPN HTI Q+KDAVRDGLRAVKNT+ED+ V+ GAGAFE+AA  HLK    K++ G+ +LGV AFA+ALLV+PKTLAE SG D  D ++ L+ E+ KG+  GL+  TGEP+DP   GI+DNY VKRQ++    +I++QLLLVDE++RAGR+
Sbjct:  132 MERLVLACGGEAVNSVDDLTPDVLGWAGLVYEHVLGEEKYTFVENVRNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTLEDRAVVLGAGAFEVAASQHLKNTVKKTVQGRAQLGVEAFADALLVVPKTLAENSGLDTQDVLVGLQMEHDKGNIVGLNQHTGEPMDPYLEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRN 338

The following BLAST results are available for this feature:

BLAST of Gvermi5160.t2 vs. uniprot

BLAST of Gvermi5160.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3J6S5_9FLOR	7.490e-130	87.14	T-complex protein 1 subunit zeta 1 n=1 Tax=Gracila...	[more]
R7QDI5_CHOCR	6.040e-116	81.90	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]
A0A5J4Z5Z8_PORPP	7.080e-91	64.29	T-complex protein 1 subunit zeta 2 n=1 Tax=Porphyr...	[more]
A0A1X6NLK8_PORUM	6.600e-87	63.33	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
M2XHC0_GALSU	1.190e-85	60.87	T-complex protein 1 subunit n=1 Tax=Galdieria sulp...	[more]
A0A446WT14_TRITD	4.980e-85	61.84	Uncharacterized protein n=2 Tax=Triticum turgidum ...	[more]
A0A8J4Q2J2_9MYCE	2.300e-84	62.62	Uncharacterized protein n=1 Tax=Polysphondylium vi...	[more]
Q8T5T4_PHYPO	4.820e-84	62.80	Chaperonin containing TCP-1 zeta subunit n=1 Tax=P...	[more]
TCPZ_DICDI	6.140e-84	62.62	T-complex protein 1 subunit zeta n=3 Tax=Dictyoste...	[more]
D5A7V5_PICSI	8.700e-84	60.87	Uncharacterized protein n=1 Tax=Picea sitchensis T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002423	Chaperonin Cpn60/GroEL/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 1..205 e-value: 1.8E-62 score: 211.6
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 86..202 e-value: 6.3E-63 score: 215.3
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 81..203
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 50..85 e-value: 6.3E-63 score: 215.3
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 1..49 e-value: 6.3E-63 score: 215.3
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 1..58
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PANTHER	PTHR11353	CHAPERONIN	coord: 1..208
None	No IPR available	PANTHER	PTHR11353:SF21	T-COMPLEX PROTEIN 1 SUBUNIT ZETA	coord: 1..208

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24228	contig	ScGOVlb_24228:482091..482723 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5160.t2	Gvermi5160.t2	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24228 482091..482723 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5160.t2 ID=Gvermi5160.t2|Name=Gvermi5160.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=211bp
MERITMACGGIPVNSVEGLTIDDLGFAGAVYEEVHEDDKYTFVEEVKNPF
SCTVLIRGPNKHTITQMKDAVRDGLRAVKNTMEDQCVLPGAGAFEIAAHA
HLKKFANKSITGKTKLGVTAFAEALLVIPKTLAETSGHDALDCIIKLEEE
NAKGHFAGLDLATGEPLDPNASGIYDNYIVKRQMLGLASIISTQLLLVDE
ILRAGRDTTR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002423	Cpn60/GroEL/TCP-1
IPR027413	GROEL-like_equatorial_sf
IPR027410	TCP-1-like_intermed_sf
IPR027409	GroEL-like_apical_dom_sf
IPR017998	Chaperone_TCP-1