Gvermi5139.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
|
Overview
Homology
BLAST of Gvermi5139.t1 vs. uniprot
Match: A0A2V3J6V6_9FLOR (Splicing factor U2af small subunit B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V6_9FLOR) HSP 1 Score: 331 bits (849), Expect = 5.160e-109 Identity = 167/236 (70.76%), Postives = 192/236 (81.36%), Query Frame = 0
Query: 1 MAEHLAAIYGTEKDKVNCPFYFKIGACRHGDRCSRVHHKPLFSRTILLHNLYVSPDQLIALAAQQRLPXXXXXXXXXXHHFEDFYYDVHDELSKFGPIDKLYVCENLADHLAGNTYVKFFDDRSAQLALDAVNGRFYAGRVVRAEFSPVTDFREGKCRPFESDGQCERGDFCHFLHLRPPP----RPDRPHPSEPRAPPADHKRPFRPRDRAPAPHYAARRRDERYRPS---WYDS 229
MAEHLA+IYGTEKDK+NCPFYFKIGACRHGDRCSRVHHKPLFS T+LLHNLYVSP+QLI++AA+Q LP +HFEDFY+D++DEL+K GPIDKLYVCENLADHLAGNTYVKF D+ +AQLAL+A+NGR+YAGR V+AEFSPVTDFREGKCRPFE DGQCERGDFCHFLHLR P R D H S R + R +RPRDRAP +Y RRR++RYR S +YD+
Sbjct: 1 MAEHLASIYGTEKDKINCPFYFKIGACRHGDRCSRVHHKPLFSPTLLLHNLYVSPNQLISIAAKQGLPPPVIPQQDIFNHFEDFYWDIYDELAKHGPIDKLYVCENLADHLAGNTYVKFLDEHAAQLALNAINGRYYAGRPVKAEFSPVTDFREGKCRPFERDGQCERGDFCHFLHLRRQPNSAAREDTLHYSARR----EDVRGYRPRDRAPI-YYDGRRREDRYRSSSSAYYDA 231
BLAST of Gvermi5139.t1 vs. uniprot
Match: R7QB72_CHOCR (Splicing factor U2af small subunit B n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB72_CHOCR) HSP 1 Score: 290 bits (741), Expect = 3.830e-94 Identity = 161/271 (59.41%), Postives = 183/271 (67.53%), Query Frame = 0
Query: 1 MAEHLAAIYGTEKDKVNCPFYFKIGACRHGDRCSRVHHKPLFSRTILLHNLYVSPDQLIALAAQQRLPXXXXXXXXXXHHFEDFYYDVHDELSKFGPIDKLYVCENLADHLAGNTYVKFFDDRSAQLALDAVNGRFYAGRVVRAEFSPVTDFREGKCRPFESDGQCERGDFCHFLHLRP----------PPRPDR---PHPSEPRAPPADHKRPFRPRDRAPAPHYA----ARRRDERYRPSWYDSREPRHSYERSQ--PYDRYAQRDRER 252
MAEHL +IYGTEKDKVNCPFY+KIGACRHGDRCSRVH+KPLFS+T+LLHNLY SPDQ+IA AA Q LP HHF+DFY DV E+ K GP+D+L VCENLADHLAGNTYVKF D+ SAQ AL+A++GR+YAGR V EFSPVTDFREGKCRPFE GQCERGD+CHF+HLR PRPDR PH S D R + PRD P Y RD R P+ Y R S ER + YD+ + RER
Sbjct: 1 MAEHLVSIYGTEKDKVNCPFYYKIGACRHGDRCSRVHNKPLFSQTLLLHNLYQSPDQIIASAAAQSLPPPDIPPDDLRHHFDDFYADVLHEMLKHGPVDELRVCENLADHLAGNTYVKFADEESAQNALNALHGRWYAGRPVLVEFSPVTDFREGKCRPFERYGQCERGDYCHFMHLRRHPGGTRPDDHDPRPDRLRYPHSSR------DKYRDYPPRDSRDYPRYQYDDRRSERDRREGPARYRERSRPKSRERGRYSDYDKSYKSTRER 265
BLAST of Gvermi5139.t1 vs. uniprot
Match: M2XVE9_GALSU (Splicing factor U2AF 35 kDa subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XVE9_GALSU) HSP 1 Score: 246 bits (628), Expect = 7.190e-77 Identity = 109/178 (61.24%), Postives = 144/178 (80.90%), Query Frame = 0
Query: 1 MAEHLAAIYGTEKDKVNCPFYFKIGACRHGDRCSRVHHKPLFSRTILLHNLYVSPDQLIALAAQQRLPXXXXXXXXXXHHFEDFYYDVHDELSKFGPIDKLYVCENLADHLAGNTYVKFFDDRSAQLALDAVNGRFYAGRVVRAEFSPVTDFREGKCRPFESDGQCERGDFCHFLHLR 178
MAEHLA+I+GTEKD+VNCPFYFKIGACRHG+RCSR+H+KP+FS+TILL N+Y+S DQ+ A A +HF+DFY DV+DELSK+G I++++VCEN+++HL GN Y+KF D+ +AQ AL AVNGR+YAGR+V AEFSPVTDFRE +CRP+E C+RGD+C+F+H++
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNKPVFSQTILLKNMYLSVDQIAAAAIAVGAKPPEMSEEDIKYHFDDFYEDVYDELSKYGEIEEMHVCENMSEHLTGNVYIKFKDEDAAQRALQAVNGRYYAGRMVHAEFSPVTDFREARCRPYERQ-LCDRGDYCNFMHIK 177
BLAST of Gvermi5139.t1 vs. uniprot
Match: A0A7S2ZY96_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZY96_9RHOD) HSP 1 Score: 243 bits (619), Expect = 5.000e-76 Identity = 107/178 (60.11%), Postives = 143/178 (80.34%), Query Frame = 0
Query: 1 MAEHLAAIYGTEKDKVNCPFYFKIGACRHGDRCSRVHHKPLFSRTILLHNLYVSPDQLIALAAQQRLPXXXXXXXXXXHHFEDFYYDVHDELSKFGPIDKLYVCENLADHLAGNTYVKFFDDRSAQLALDAVNGRFYAGRVVRAEFSPVTDFREGKCRPFESDGQCERGDFCHFLHLR 178
MAEHLA+I+GTEKD+VNCPFYFKIGACRHG+RCSR+H+KPLFS+T+LL N+Y+SP+Q+ A AA +HFEDFY DV +EL+K G ++++++CENL+DHLAGN YVKF D+ AQ AL+AV GR YAGR+++ E+SPVT+FRE +CRP+E C+RGD+C+F+H+R
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRMHNKPLFSQTLLLENMYLSPEQIGAAAAAAGKEFPKLSEEAEKYHFEDFYEDVFEELAKHGEVEEMHICENLSDHLAGNAYVKFRDEEGAQAALNAVKGRHYAGRLLKVEYSPVTEFREARCRPYEKK-LCDRGDYCNFMHIR 177
BLAST of Gvermi5139.t1 vs. uniprot
Match: A0A7S1XED7_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XED7_9RHOD) HSP 1 Score: 224 bits (571), Expect = 2.150e-68 Identity = 101/178 (56.74%), Postives = 131/178 (73.60%), Query Frame = 0
Query: 1 MAEHLAAIYGTEKDKVNCPFYFKIGACRHGDRCSRVHHKPLFSRTILLHNLYVSPDQLIALAAQQRLPXXXXXXXXXXHHFEDFYYDVHDELSKFGPIDKLYVCENLADHLAGNTYVKFFDDRSAQLALDAVNGRFYAGRVVRAEFSPVTDFREGKCRPFESDGQCERGDFCHFLHLR 178
MAEHLAAI+GTEKD+VNCPFYFKIGACRHG+RCSR+H+KP+FS+T+L N Y+SP+ + A HFE F+ DV EL++ G I++ +VC+NL+DHL GN YVKF D+ AQ AL V+GR+Y GR V+ E+SPVTDFRE +CRP E G C+RGD+C+F+H+R
Sbjct: 1 MAEHLAAIHGTEKDRVNCPFYFKIGACRHGERCSRMHNKPIFSQTLLFENFYLSPEAIAQAAVSAGQHPPKFSEEGAREHFEFFFEDVFSELAEHGEIEEFHVCQNLSDHLNGNVYVKFADEEGAQEALKKVSGRYYCGRPVKVEYSPVTDFREARCRPHER-GTCDRGDYCNFMHIR 177
BLAST of Gvermi5139.t1 vs. uniprot
Match: A0A7R9Y1B8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y1B8_MICPS) HSP 1 Score: 221 bits (564), Expect = 3.400e-68 Identity = 103/180 (57.22%), Postives = 133/180 (73.89%), Query Frame = 0
Query: 1 MAEHLAAIYGTEKDKVNCPFYFKIGACRHGDRCSRVHHKPLFSRTILLHNLYVSPDQLIAL-AAQQRLPXXXXXXXXXXHHFEDFYYDVHDELSKFGPIDKLYVCENLADHLAGNTYVKFFDDRSAQLALDAVNGRFYAGRVVRAEFSPVTDFREGKCRPFESDGQCERGDFCHFLHLRP 179
MAEHLA+I+GTEKD+VNCPFYFKIGACRHGDRCSR+H+KP S+TIL+ N+Y SP+ +A AA HFEDFY D+ +EL+ +G I+ L +C+NLADHL GN YVK+ ++ SA AL+A++GRFYAGR + EFSPVTDFRE CR +E + C RG +C+F+HL+P
Sbjct: 13 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTLSQTILMSNMYQSPEAAMAAQAATSGAVPEAPDARKMQEHFEDFYEDIFEELATYGEIEGLNICDNLADHLVGNVYVKYREEESALAALNALSGRFYAGRPILCEFSPVTDFRESTCRQYE-ENTCTRGGYCNFMHLKP 191
BLAST of Gvermi5139.t1 vs. uniprot
Match: C1N5W3_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N5W3_MICPC) HSP 1 Score: 221 bits (564), Expect = 9.990e-67 Identity = 103/180 (57.22%), Postives = 133/180 (73.89%), Query Frame = 0
Query: 1 MAEHLAAIYGTEKDKVNCPFYFKIGACRHGDRCSRVHHKPLFSRTILLHNLYVSPDQLIAL-AAQQRLPXXXXXXXXXXHHFEDFYYDVHDELSKFGPIDKLYVCENLADHLAGNTYVKFFDDRSAQLALDAVNGRFYAGRVVRAEFSPVTDFREGKCRPFESDGQCERGDFCHFLHLRP 179
MAEHLA+I+GTEKD+VNCPFYFKIGACRHGDRCSR+H+KP S+TIL+ N+Y SP+ +A AA HFEDFY D+ +EL+ +G I+ L +C+NLADHL GN YVK+ ++ SA AL+A++GRFYAGR + EFSPVTDFRE CR +E + C RG +C+F+HL+P
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTLSQTILMSNMYQSPEAAMAAQAATSGAVPEAPDARKMQEHFEDFYEDIFEELATYGEIEGLNICDNLADHLVGNVYVKYREEESALAALNALSGRFYAGRPILCEFSPVTDFRESTCRQYE-ENTCTRGGYCNFMHLKP 179
BLAST of Gvermi5139.t1 vs. uniprot
Match: A0A7S0SNP1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SNP1_9CHLO) HSP 1 Score: 218 bits (556), Expect = 1.110e-66 Identity = 101/180 (56.11%), Postives = 132/180 (73.33%), Query Frame = 0
Query: 1 MAEHLAAIYGTEKDKVNCPFYFKIGACRHGDRCSRVHHKPLFSRTILLHNLYVSPDQLIALAAQQR-LPXXXXXXXXXXHHFEDFYYDVHDELSKFGPIDKLYVCENLADHLAGNTYVKFFDDRSAQLALDAVNGRFYAGRVVRAEFSPVTDFREGKCRPFESDGQCERGDFCHFLHLRP 179
MAEHLA I+GTEKD+VNCPFYFKIGACRHGDRCSR+H+KP S+TIL+ N+Y +P+ + A AA + HFEDFY D+ +EL+ FG ++ L VC+NLADHL GN YVK+ ++ A AL+A++GRFY+GR + EFSPVTDFRE CR +E + C RG +C+F+HL+P
Sbjct: 1 MAEHLAQIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTLSQTILMTNMYQNPEAIAAAAAAAGGVAPAPMDPRQMQEHFEDFYEDIFEELANFGELEGLNVCDNLADHLVGNVYVKYKEEECALAALNALSGRFYSGRPILCEFSPVTDFRESTCRQYE-ENTCTRGGYCNFMHLKP 179
BLAST of Gvermi5139.t1 vs. uniprot
Match: A0A2R6WH09_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WH09_MARPO) HSP 1 Score: 221 bits (563), Expect = 1.290e-66 Identity = 102/178 (57.30%), Postives = 129/178 (72.47%), Query Frame = 0
Query: 1 MAEHLAAIYGTEKDKVNCPFYFKIGACRHGDRCSRVHHKPLFSRTILLHNLYVSPDQLIALAAQQRLPXXXXXXXXXXHHFEDFYYDVHDELSKFGPIDKLYVCENLADHLAGNTYVKFFDDRSAQLALDAVNGRFYAGRVVRAEFSPVTDFREGKCRPFESDGQCERGDFCHFLHLR 178
MAEHLA+I+GTEKD+VNCPFYFKIGACRHGDRCSR+H++P S+T+LL N+Y SPD Q HFEDFY D+ +ELSK+G I+ L VC+NLADH+ GN YVKF ++ A AL+A+NGRFYAGR + +FSPVTDFRE CR +E + C RG +C+F+HL+
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTASQTLLLANMYQSPDAGFHGGVDQHGNIQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADHMIGNVYVKFREEEHAAAALNALNGRFYAGRPIIVDFSPVTDFREATCRQYE-ENTCNRGGYCNFMHLK 177
BLAST of Gvermi5139.t1 vs. uniprot
Match: A0A1X6NKM9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKM9_PORUM) HSP 1 Score: 222 bits (565), Expect = 1.380e-66 Identity = 103/180 (57.22%), Postives = 138/180 (76.67%), Query Frame = 0
Query: 1 MAEHLA---AIYGTEKDKVNCPFYFKIGACRHGDRCSRVHHKPLFSRTILLHNLYVSPDQLIALAAQQRLPXXXXXXXXXXHHFEDFYYDVHDELSKFGPIDKLYVCENLADHLAGNTYVKFFDDRSAQLALDAVNGRFYAGRVVRAEFSPVTDFREGKCRPFESDGQCERGDFCHFLHL 177
MA+HLA A++GTE+D+VNCPFY+K+GACRHG+RCSR+H+KPL S T+LL N+Y SP Q+ A AA LP +F++FY DV E++K+G +D+L+VCENL+DHLAGNTYVKF ++ SA AL A+ R+YAGR V+A+ SPVT FRE +CRP+E D C+RGD+C+F+HL
Sbjct: 1 MAKHLANLVAVHGTERDRVNCPFYYKMGACRHGERCSRLHNKPLSSTTLLLTNMYYSPAQIRATAAAAGLPPPTIPKAEETTYFDNFYVDVWREMAKYGRVDELHVCENLSDHLAGNTYVKFAEEDSAAAALAALESRWYAGRPVKADLSPVTHFREARCRPYEKDA-CDRGDYCNFMHL 179 The following BLAST results are available for this feature:
BLAST of Gvermi5139.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5139.t1 ID=Gvermi5139.t1|Name=Gvermi5139.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=336bpback to top |