Gvermi5126.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5126.t1
Unique NameGvermi5126.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length136
Homology
BLAST of Gvermi5126.t1 vs. uniprot
Match: A0A2V3J6R4_9FLOR (Phytol kinase 1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6R4_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 4.350e-25
Identity = 64/129 (49.61%), Postives = 86/129 (66.67%), Query Frame = 0
Query:    1 LVYCAALLALTAALFQTPAAAVAVCNLCVGDALAEVVGRALPSPRWPATHKTVAGTAAFVAGASAASVALLGWFSRFALADAPGPPT-VAAVALISALSAAAELLADRMRVDDNAAVALTAAVLSLLLL 128
            ++Y  +LL +T  LFQTPAA V V N+CVGD LAEVVGR +   +WP+++K++AG+ AFV GA  AS+ LL WF  F L   P   + V  VA ++ +SAA EL+A  +  DDN +VAL A +L  LLL
Sbjct:  159 MLYSVSLLGMTLLLFQTPAAVVGVANMCVGDGLAEVVGRTVGGIKWPSSNKSLAGSTAFVGGAVLASLLLLEWFQSFGLTSLPQTNSCVLRVAAVAVVSAAVELIAGDLGADDNVSVALAAGLLGSLLL 287          
BLAST of Gvermi5126.t1 vs. uniprot
Match: A0A7R9UWT7_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UWT7_DIALT)

HSP 1 Score: 68.2 bits (165), Expect = 5.620e-12
Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 0
Query:   22 VAVCNLCVGDALAEVVGRALP-SPRWPAT-HKTVAGTAAFVAGASAASVALLGWFSRFALADAPGPPTVAAVALISALSAAAELLADRMRVDDNAAVALTAAVLSLLLLPAP 131
            VA+  + VGD +A++VGR L  S RWP    K+VAG+ AFVAGA+ AS+ LL W   + +     P T   + LIS   AA ELL   + +DDN +V L  A L+L LL  P
Sbjct:   26 VAIAQMAVGDGVADIVGRRLGGSNRWPFNPSKSVAGSVAFVAGATGASIGLLAWLGAWGVLAPLAPDTPLRLLLISVACAAVELLPTDV-LDDNVSVPLVGAGLALALLGTP 136          
BLAST of Gvermi5126.t1 vs. uniprot
Match: A0A8J6C688_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C688_DIALT)

HSP 1 Score: 68.2 bits (165), Expect = 6.490e-11
Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 0
Query:   22 VAVCNLCVGDALAEVVGRALP-SPRWPAT-HKTVAGTAAFVAGASAASVALLGWFSRFALADAPGPPTVAAVALISALSAAAELLADRMRVDDNAAVALTAAVLSLLLLPAP 131
            VA+  + VGD +A++VGR L  S RWP    K+VAG+ AFVAGA+ AS+ LL W   + +     P T   + LIS   AA ELL   + +DDN +V L  A L+L LL  P
Sbjct:  197 VAIAQMAVGDGVADIVGRRLGGSNRWPFNPSKSVAGSVAFVAGATGASIGLLAWLGAWGVLAPLAPDTPLRLLLISVACAAVELLPTDV-LDDNVSVPLVGAGLALALLGTP 307          
BLAST of Gvermi5126.t1 vs. uniprot
Match: A0A7S0Q8J0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q8J0_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 1.090e-10
Identity = 48/115 (41.74%), Postives = 64/115 (55.65%), Query Frame = 0
Query:   15 FQTPAAAVAVCNLCVGDALAEVVGRALPSPRWP-ATHKTVAGTAAFVAGASAASVALLGWFSRFALADAPGPPTVAAVALISALSAAAELLADRMRVDDNAAVALTAAVLSLLLL 128
            F++  A+ AVC + VGD LA++ GR   + +WP A  K+  G+ AF   A  AS+  +  F            +V A+ALIS LSAAAEL+     VDDN  V LTA  L+ LLL
Sbjct:    3 FRSVVASTAVCQMAVGDGLADIFGRQYGTSKWPFAPTKSYVGSFAFALSAFLASLGFVALFHACGYTALTAAASVPALALISLLSAAAELMPG---VDDNIVVPLTATGLAALLL 114          
BLAST of Gvermi5126.t1 vs. uniprot
Match: R1F261_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F261_EMIHU)

HSP 1 Score: 59.3 bits (142), Expect = 9.960e-8
Identity = 47/123 (38.21%), Postives = 62/123 (50.41%), Query Frame = 0
Query:    3 YCAALLALTAALFQTPAAAVAVCNLCVGDALAEVVGRALPSPRWP-ATHKTVAGTAAFVAG--------------------ASAASVALLGWFSRFALADAPGPPTVAAVALISALSAAAELL 104
            Y   LL  T   +++PAAAVA+C + VGD +A++VGR   S +WP +  K+VAG+AAFVA                     A +AS+ L+  F  F            AV LIS LSA  ELL
Sbjct:  187 YTLVLLVATVLGWRSPAAAVAICQMAVGDGVADIVGRRYGSVKWPFSPSKSVAGSAAFVASTAETEIEPPPARRTKPRAASAFSASLGLISLFHAFGFTALTAAAAAPAVLLISLLSAPVELL 309          
BLAST of Gvermi5126.t1 vs. uniprot
Match: A0A200PX22_9MAGN (Phosphatidate cytidylyltransferase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PX22_9MAGN)

HSP 1 Score: 57.4 bits (137), Expect = 5.010e-7
Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 0
Query:   17 TPAAAVAVCNLCVGDALAEVVGRALPSPRWPAT-HKTVAGTAAFVAGASAASVALLGWFSRFALADAPGPPTVAAVALISALSAAAELLADRMRVDDNAAVALTAAVLSLL 126
            +P A  A+CNLC GD +A++VGR   S + P   +K+ AG+ A  A    ASV  + +FS+F   +   P  V    ++S ++A  E L     +DDN  V LT+ ++  L
Sbjct:  217 SPIAIAAICNLCAGDGVADIVGRRFGSKKLPHNRNKSYAGSIAMAAAGFLASVGYMHYFSQFGFIE-ESPGLVLGFLIVSLVAALVESLPISTELDDNLTVPLTSILVGSL 326          
BLAST of Gvermi5126.t1 vs. uniprot
Match: A0A7S4B5N8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5N8_CHRCT)

HSP 1 Score: 55.8 bits (133), Expect = 1.820e-6
Identity = 46/129 (35.66%), Postives = 65/129 (50.39%), Query Frame = 0
Query:    1 LVYCAALLALTAALFQTPAAAVAVCNLCVGDALAEVVGRALPSPRWP-ATHKTVAGTAAFVAGASAASVALLGWFSRFALADAPGPPTVAAVALISALSAAAELLADRMRVDDNAAVALTAAVLSLLLL 128
            L+Y   LL  T   +++  A+ A+C + VGD LA++ GR     +WP A  K+  G+AAF   A  AS   + +F       A       ++  IS L AA EL+      DDN  V  TA +LS+LLL
Sbjct:  227 LIYTLVLLCATVFGWRSIVASTALCQMAVGDGLADIFGRRFGGTKWPFAPSKSYVGSAAFALSAFLASAGFVSFFHACGYTSATALACWPSLLAISILCAAVELVPVA---DDNLTVPFTAMLLSILLL 352          
BLAST of Gvermi5126.t1 vs. uniprot
Match: M1V6T3_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V6T3_CYAM1)

HSP 1 Score: 55.5 bits (132), Expect = 2.660e-6
Identity = 36/118 (30.51%), Postives = 59/118 (50.00%), Query Frame = 0
Query:   17 TPAAAVAVCNLCVGDALAEVVGRALPSPRWP-----ATHKTVAGTAAFVAGASAASVALLGWFSRFALADAPGPPTVAAVALISALSAAAELLADRMRVDDNAAVALTAAVLSLLLLP 129
            +P   +A+  +CVGD +A+++GR   +P+WP      + KT+ GT  F+  A   S   +  F  +   D       A +A+++   A  EL+A     DDN  V L+A ++  LL P
Sbjct:  334 SPVGILALIQMCVGDGMADLIGRRWRTPKWPLPRGGGSQKTIGGTTVFIVSAFLVSCLYIAIFHAWGYVDIGIAAAAARIAMLTVCCAVVELVAPG---DDNITVPLSACLIGSLLFP 448          
BLAST of Gvermi5126.t1 vs. uniprot
Match: A0A067LBJ4_JATCU (Uncharacterized protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LBJ4_JATCU)

HSP 1 Score: 55.1 bits (131), Expect = 3.020e-6
Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 0
Query:    3 YCAALLALTAALF--QTPAAAVAVCNLCVGDALAEVVGRALPSPRWPA-THKTVAGTAAFVAGASAASVALLGWFSRFALADAPGPPTVAAVALISALSAAAELLADRMRVDDNAAVALTAAVLSLL 126
            Y A  + LT A++   +P    A+CNLC GD +A++VGR   + + P  T+K++AG+ A       AS+  + +F+ F         T+  + ++S  SA  E L    ++DDN  V+LT+ +L  L
Sbjct:  170 YYALTITLTCAIYWRTSPITIAAICNLCAGDGMADIVGRRFGNHKLPYNTNKSIAGSVAMALAGFLASITYMHYFASFGYVRESWEMTMGFL-VVSIASAIVESLPISTQLDDNLTVSLTSVLLGTL 295          
BLAST of Gvermi5126.t1 vs. uniprot
Match: A0A7J7IGF3_9RHOD (Phosphatidate cytidylyltransferase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGF3_9RHOD)

HSP 1 Score: 54.3 bits (129), Expect = 6.660e-6
Identity = 38/117 (32.48%), Postives = 59/117 (50.43%), Query Frame = 0
Query:   17 TPAAAVAVCNLCVGDALAEVVGRALPSPRWPA----THKTVAGTAAFVAGASAASVALLGWFSRFALADAPGPPTVAAVALISALSAAAELLADRMRVDDNAAVALTAAVLSLLLLP 129
            +P   +A+  +CVGD +A++VGR   +P+WP     + KT+ GT A+V  A   S + +  F      +         VA+++   AA ELLA     DDN  V L A ++  +L P
Sbjct:  317 SPLGILALIQMCVGDGMADLVGRRWRTPKWPLPGGLSRKTIGGTLAYVLSAFLISCSYIAIFHACGCVETGVAAAAGRVAILTVCCAAVELLAPG---DDNVTVPLAACLIGSVLFP 430          
The following BLAST results are available for this feature:
BLAST of Gvermi5126.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3J6R4_9FLOR4.350e-2549.61Phytol kinase 1, chloroplastic n=1 Tax=Gracilariop... [more]
A0A7R9UWT7_DIALT5.620e-1244.64Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]
A0A8J6C688_DIALT6.490e-1144.64Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S0Q8J0_9EUKA1.090e-1041.74Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
R1F261_EMIHU9.960e-838.21Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A200PX22_9MAGN5.010e-735.14Phosphatidate cytidylyltransferase n=1 Tax=Macleay... [more]
A0A7S4B5N8_CHRCT1.820e-635.66Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
M1V6T3_CYAM12.660e-630.51Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A067LBJ4_JATCU3.020e-632.28Uncharacterized protein n=2 Tax=Jatropha curcas Ta... [more]
A0A7J7IGF3_9RHOD6.660e-632.48Phosphatidate cytidylyltransferase n=1 Tax=Cyanidi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32523:SF13BNAA03G56250D PROTEINcoord: 16..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..74
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..113
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..132
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 114..133
NoneNo IPR availableTMHMMTMhelixcoord: 2..24
IPR039606Phytol/farnesol kinasePANTHERPTHR32523PHYTOL KINASE 1, CHLOROPLASTICcoord: 16..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:340480..340887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5126.t1Gvermi5126.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 340480..340887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5126.t1 ID=Gvermi5126.t1|Name=Gvermi5126.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=136bp
LVYCAALLALTAALFQTPAAAVAVCNLCVGDALAEVVGRALPSPRWPATH
KTVAGTAAFVAGASAASVALLGWFSRFALADAPGPPTVAAVALISALSAA
AELLADRMRVDDNAAVALTAAVLSLLLLPAPAPPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039606Phytol/farnesol_kinase