Gvermi5124.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5124.t1
Unique NameGvermi5124.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length123
Homology
BLAST of Gvermi5124.t1 vs. uniprot
Match: A0A2V3J8S9_9FLOR (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J8S9_9FLOR)

HSP 1 Score: 195 bits (495), Expect = 2.220e-62
Identity = 95/122 (77.87%), Postives = 104/122 (85.25%), Query Frame = 0
Query:    1 MGAAASMPACRGAAWAADISHAQRVTRLYRAALRTSRDWTIDYDMWVAQCEQIRARFRANQHKSALEGKVLVDSAMAELFSMRHPDPYIPIYRAGSSSYQRNVPPPPELTHKSMPPPHEAIQ 122
            MGAAASM A R AAW   I+H Q+VTRLYRAALRTSRDW IDYDMWV  CE+I+ARFRAN+ K  +EGK LV+  MAELF MRHPDPYIPIY+ GSSSYQRNVPPPPELTH+SMPPPHEAIQ
Sbjct:    1 MGAAASMAAPRAAAWEPGINHVQKVTRLYRAALRTSRDWHIDYDMWVKDCERIQARFRANKDKPLMEGKTLVEKGMAELFEMRHPDPYIPIYKPGSSSYQRNVPPPPELTHQSMPPPHEAIQ 122          
BLAST of Gvermi5124.t1 vs. uniprot
Match: A0A7S0ZDN1_9RHOD (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDN1_9RHOD)

HSP 1 Score: 137 bits (345), Expect = 1.550e-39
Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 0
Query:    1 MGAAASMPACRGAAWAADISHAQRVTRLYRAALRTSRDWTIDYDMWVAQCEQIRARFRANQHKSALEGKVLVDSAMAELFSMRHPDPYIPIYRAGSSSYQRNVPPPPELTHKSMPPPHEAI 121
            MG  ASMPACR A +   ISH  +V RLYR  LRTSRDW  DY +W+  C+  + +F+ N H S  EG++LV   + EL + RHP+P IPIYR G   YQRN PPPPE+T   MPPPH+ I
Sbjct:    1 MGTTASMPACRAAPFEKGISHRHQVMRLYRHTLRTSRDWHWDYFVWIEDCQHWQKKFKENVHLSVAEGRILVQKGLDELLAKRHPEPIIPIYRPGGVKYQRNTPPPPEVTEHLMPPPHQRI 121          
BLAST of Gvermi5124.t1 vs. uniprot
Match: M1V5M4_CYAM1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=2 Tax=cellular organisms TaxID=131567 RepID=M1V5M4_CYAM1)

HSP 1 Score: 127 bits (319), Expect = 1.390e-35
Identity = 61/122 (50.00%), Postives = 85/122 (69.67%), Query Frame = 0
Query:    1 MGAAASMPACRGAAWAADISHAQRVTRLYRAALRTSRDWTIDYDMWVAQCEQIRARFRANQHKSALEGKVLVDSAMAELFSMRHPDPYIPIYRAGSSSYQRNVPPPPELTHKSMPPPHEAIQ 122
            MGAA SMPA R A +A  ++H QRVTRLYR ALRT+RDW +D D+W+ +  +I+A F+ N++    E ++L++  ++ L  MRHP+PY   Y  G  +YQRNVPPPPEL  +S+PP  E I+
Sbjct:    1 MGAAVSMPAQRAAPFAPGLTHQQRVTRLYRHALRTARDWFVDVDLWLERSREIQAEFQRNKNAGPREAQILLNRGLSRLLEMRHPEPYTAPYLPGGCTYQRNVPPPPELCERSLPPHSEMIR 122          
BLAST of Gvermi5124.t1 vs. uniprot
Match: M2Y8L6_GALSU (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y8L6_GALSU)

HSP 1 Score: 125 bits (313), Expect = 1.140e-34
Identity = 62/122 (50.82%), Postives = 87/122 (71.31%), Query Frame = 0
Query:    1 MGAAASMPACRGAAWAADISHAQRVTRLYRAALRTSRDWTIDYDMWVAQCEQIRARFRANQHKSALEGKVLVDSAMAELFSMRHPDPYIPIYRAGSSSYQRNVPPPPELTHKSMPPPHEAIQ 122
            MG   SMPA R A +A +++H QRVTRLYR ALRT+RDW  D+D++V   E+I+ARF+ N++ +  EG+ LV++ + EL S RHP+PYIP +  G ++YQRNVP PPE  +  +PPP   I+
Sbjct:    1 MGNQVSMPAARAAPFAPNLTHKQRVTRLYRHALRTARDWEPDFDLFVKDAEKIQARFKKNKNLTIQEGQRLVEAGLRELISNRHPEPYIPPFAPGGTAYQRNVPCPPEDVNDLLPPPERRIR 122          
BLAST of Gvermi5124.t1 vs. uniprot
Match: A0A7J7IKS8_9RHOD (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IKS8_9RHOD)

HSP 1 Score: 121 bits (304), Expect = 1.410e-32
Identity = 57/122 (46.72%), Postives = 82/122 (67.21%), Query Frame = 0
Query:    1 MGAAASMPACRGAAWAADISHAQRVTRLYRAALRTSRDWTIDYDMWVAQCEQIRARFRANQHKSALEGKVLVDSAMAELFSMRHPDPYIPIYRAGSSSYQRNVPPPPELTHKSMPPPHEAIQ 122
            MG+A SMP  R A +A  ++H QRVTRLYR ALRT+RDW +D D+W+ +  +I+A FR  ++    E ++L++  +  L  +RHP+PY   Y  G  +YQRNVPPPPEL  +S+PP  E ++
Sbjct:   59 MGSAVSMPVQRAAPFATGLTHQQRVTRLYRHALRTARDWYVDLDLWLERSREIQAEFRRYKNVGPREAQILLNRGLQRLVELRHPEPYTAAYMPGGCAYQRNVPPPPELCERSLPPHSEMVR 180          
BLAST of Gvermi5124.t1 vs. uniprot
Match: A0A369S1R7_9METZ (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=2 Tax=Trichoplax TaxID=10227 RepID=A0A369S1R7_9METZ)

HSP 1 Score: 78.2 bits (191), Expect = 2.750e-16
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 0
Query:   19 ISHAQRVTRLYRAALRTSRDWTIDYDMWVAQCEQIRARFRANQHKSALE-GKVLVDSAMAELFSMRHPDPYIPIYRAGSSSYQRNVPPPPEL 109
            ++HAQRVTRLYR  LR S  W I+ D W  +   IRARF AN++ + +     L + AM E    +HPDPY+     G   Y+RN+PPPP +
Sbjct:    6 LTHAQRVTRLYRQCLRHSLSWIIERDKWRREAVCIRARFDANKNITNMTVANQLYEEAMKEFNLYKHPDPYVHPDSPGGVRYERNIPPPPHV 97          
BLAST of Gvermi5124.t1 vs. uniprot
Match: A0A8J2WDU4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WDU4_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.290e-13
Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 0
Query:   16 AADISHAQRVTRLYRAALRTSRDWTIDYDMWVAQCEQIRARF--RANQHKSALEGKVLVDSAMAELFSMRHPDPYIPIYRAGSSSYQRNVP 104
            A  ++HAQRV RLYR AL+T   W +D  +++A+ +++RA F   A    +++E + L++    +LF   HPD YI  Y  G S Y RN P
Sbjct:   27 APKLTHAQRVCRLYRNALKTQNSWAVDRQVFIAEADKMRAEFDKHAQLAATSVEARNLLERGEEKLFQESHPDRYIVAYLPGGSLYMRNAP 117          
BLAST of Gvermi5124.t1 vs. uniprot
Match: A0A7M5WJ91_9CNID (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WJ91_9CNID)

HSP 1 Score: 66.2 bits (160), Expect = 1.630e-11
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 0
Query:   18 DISHAQRVTRLYRAALRTSRDWTIDYDMWVAQCEQIRARFRANQHKS-ALEGKVLVDSAMAELFSMRHPDPYIPIYRAGSSSYQRNVPPPP 107
             ++H QRVTRLYR +L+    WT++ + W  Q   +R +F  N+  +   + + +V  A A+    RHP PYI     G S Y+RNVPPPP
Sbjct:   11 QLTHHQRVTRLYRKSLKHLLSWTMNREAWREQAVLLREKFDENKSLTDKFQIEKVVKDAEAQFELWRHPAPYIHPKAPGGSKYERNVPPPP 101          
BLAST of Gvermi5124.t1 vs. uniprot
Match: UPI0006450142 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450142)

HSP 1 Score: 64.7 bits (156), Expect = 4.120e-11
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   19 ISHAQRVTRLYRAALRTSRDWTIDYDMWVAQCEQIRARFRANQHKSALEGKVLVDSAMAELFSMR----HPDPYIPIYRAGSSSYQRNVPPP 106
            ++H+Q+V R+YR  L++ RD++ DYD ++A    +R+  ++ + ++      LV   M E  S      HPDPYIP    G S +QRN+PPP
Sbjct:    4 LTHSQKVFRMYRKCLKSIRDYSEDYDYFLANASDLRSVLKSRKDET---NPFLVKKYMKEFESFSNYWDHPDPYIPCDAPGGSKWQRNIPPP 92          
BLAST of Gvermi5124.t1 vs. uniprot
Match: A0A8J6C8V8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C8V8_DIALT)

HSP 1 Score: 64.3 bits (155), Expect = 9.510e-11
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   16 AADISHAQRVTRLYRAALRTSRDWTIDYDMWVAQCEQIRARFRANQH-KSALEGKVLVDSAMAELFSMRHPDPYIPIYRAGSSSYQR 101
            AA  +H  RV  LYR AL+T+ +W +D + ++A+   +R +F AN+H +SA   + +   A A+L   +HPDPY   ++ GSS Y R
Sbjct:    3 AAPSAHTLRVCGLYRRALKTTFNWVVDRETFIAEAIDLRKQFEANRHVRSAPLIEKICSDAEADLVKFKHPDPYKLPWQFGSSKYMR 89          
The following BLAST results are available for this feature:
BLAST of Gvermi5124.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A2V3J8S9_9FLOR2.220e-6277.87NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A7S0ZDN1_9RHOD1.550e-3953.72NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
M1V5M4_CYAM11.390e-3550.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
M2Y8L6_GALSU1.140e-3450.82NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A7J7IKS8_9RHOD1.410e-3246.72NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A369S1R7_9METZ2.750e-1644.57NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A8J2WDU4_9STRA2.290e-1339.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7M5WJ91_9CNID1.630e-1139.56NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
UPI00064501424.120e-1136.96hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A8J6C8V8_DIALT9.510e-1139.08Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 23..63
e-value: 1.4E-7
score: 31.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..122
NoneNo IPR availablePANTHERPTHR12868:SF0NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 9coord: 14..108
IPR033034NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9PANTHERPTHR12868NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNITcoord: 14..108
IPR045292NDUFB9, LYR domainCDDcd20263Complex1_LYR_NDUFB9_LYRM3coord: 21..95
e-value: 4.5102E-27
score: 93.3964

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:337653..338227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5124.t1Gvermi5124.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 337653..338227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5124.t1 ID=Gvermi5124.t1|Name=Gvermi5124.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=123bp
MGAAASMPACRGAAWAADISHAQRVTRLYRAALRTSRDWTIDYDMWVAQC
EQIRARFRANQHKSALEGKVLVDSAMAELFSMRHPDPYIPIYRAGSSSYQ
RNVPPPPELTHKSMPPPHEAIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom
IPR033034NDUFB9
IPR045292Complex1_LYR_NDUFB9_LYRM3