Gvermi5123.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5123.t1
Unique NameGvermi5123.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length297
Homology
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BLAST of Gvermi5123.t1 vs. uniprot
Match: A0A2V3J6M9_9FLOR (RWP-RK domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6M9_9FLOR)

HSP 1 Score: 342 bits (878), Expect = 6.240e-112
Identity = 180/287 (62.72%), Postives = 210/287 (73.17%), Query Frame = 0 
Query:    1 MPSDPHLAWDKLDVVSFIQLPSTGQILRPIGRELLHDHVLCAPPDGLFLGSFFIHDAQLHHHDXXXXXXXXXXXXXXLLAPAHDPAAXXXXPAPAPERVTLVDPDHIVHETNGARAGRPSHRLTGQLLMTRSQVHKVLEIRARWHGLSPRQRRDNIAARDFYPFFTLNRDETAEYLGVCTTWLKDAIRAHGVNLWPGRPLRRSGAKLQTLKLARQSLRAALQFAHPSAEETQRLADEAAACDAEIDAILNKRISIVGDNMSEEHFQRFLLADGAQYLDPEWNALPPF 287
            MPS   L WDKLDVVSFIQLPSTGQILRPIGRE++H+  L    +G+FLGSF + D QL+HH                L   +D         PA   V +V+ + IV ETNGARAGRPSHRLTGQLLMTRSQV K+LEIR RW+GLSPRQRRDN++A DFY FFTLNRDETAE LGVC TWLKDAIRAHGVN+WPGRPLRRSGA LQTLK   +S +AAL+F+HPS  ET RL +E  + + +I+ +L  R+SIV  N+S E+F  FL A+G QYLDPEWNALPPF
Sbjct:  243 MPSAAGLPWDKLDVVSFIQLPSTGQILRPIGREVMHEEAL-GSAEGMFLGSFMMFDTQLYHH-----LPTEETLKQQELGQYNDYIPRTIDSTPAD--VVIVEKEDIVLETNGARAGRPSHRLTGQLLMTRSQVEKILEIRGRWNGLSPRQRRDNVSATDFYTFFTLNRDETAECLGVCATWLKDAIRAHGVNVWPGRPLRRSGAALQTLKENMESAQAALRFSHPSVGETDRLEEEVKSFERKIEEVLELRLSIVKSNVSAEYFAGFLAANGQQYLDPEWNALPPF 521
The following BLAST results are available for this feature:
BLAST of Gvermi5123.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6M9_9FLOR6.240e-11262.72RWP-RK domain-containing protein n=1 Tax=Gracilari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..89
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 143..223
score: 10.079865

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:335359..336249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5123.t1Gvermi5123.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 335359..336249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5123.t1 ID=Gvermi5123.t1|Name=Gvermi5123.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=297bp
MPSDPHLAWDKLDVVSFIQLPSTGQILRPIGRELLHDHVLCAPPDGLFLG
SFFIHDAQLHHHDPSEAALRHQQQHHHLLAPAHDPAAAAAAPAPAPERVT
LVDPDHIVHETNGARAGRPSHRLTGQLLMTRSQVHKVLEIRARWHGLSPR
QRRDNIAARDFYPFFTLNRDETAEYLGVCTTWLKDAIRAHGVNLWPGRPL
RRSGAKLQTLKLARQSLRAALQFAHPSAEETQRLADEAAACDAEIDAILN
KRISIVGDNMSEEHFQRFLLADGAQYLDPEWNALPPFPISPYGTHT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom