Gvermi5120.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5120.t1
Unique NameGvermi5120.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length133
Homology
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BLAST of Gvermi5120.t1 vs. uniprot
Match: A0A2V3J710_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J710_9FLOR)

HSP 1 Score: 175 bits (443), Expect = 3.940e-54
Identity = 84/128 (65.62%), Postives = 101/128 (78.91%), Query Frame = 0 
Query:    1 MTTPRNRLPVYAKLNQMAPGVHGQKLVVQVVSKKTISDSVDKTGKRRCHQHVLIADETGAMLLNAHDDFCQQLEVGRVVELHNIRVKIIKDRMRLTMDKWASVQESFRAIPQPVQTDPNFSQVVYRQL 128
            MTTPR++LPVY KLNQMAP  HG  +VVQVV+KKT  D  D  G+R   Q VL+AD+TGAM LNAH+  C +L  G+VVELH++RVK+  + MRLTMDKWASV E+F+AIPQ VQTDPNFS VVY+QL
Sbjct:    1 MTTPRHKLPVYLKLNQMAPNTHGHNIVVQVVNKKTTVDKTDANGRRVRQQQVLVADDTGAMYLNAHNVICDKLTEGKVVELHDVRVKLFNNCMRLTMDKWASVNETFKAIPQKVQTDPNFSHVVYQQL 128
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BLAST of Gvermi5120.t1 vs. uniprot
Match: A0A7S2V3F7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3F7_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.590e-9
Identity = 37/122 (30.33%), Postives = 56/122 (45.90%), Query Frame = 0 
Query:   11 YAKLNQMAPG-VHGQKLVVQVVSKKTISDSVDKTGKRRCHQHVLIADETGAMLLNAHDDFCQQLEVGRVVELHNIRVKIIKDRMRLTMDKWASVQ------ESFRAIPQPVQTDPNFSQVVY 125
            Y K+  + PG  HG  LV  VV  + + +     G       VL+ADETG +++ A ++    +  G VV + N  +++ K  MRL + KW  +       ES    P    T+ N S V Y
Sbjct:   16 YVKIGTLQPGPTHGHNLVGWVVKTEVVLEKPRIDGSSTRIAEVLLADETGCLVVRARNEQIDMMSPGNVVVVRNASIEMFKGYMRLVVTKWGKITAHPDGIESTPPAPSSTNTENNLSSVEY 137
The following BLAST results are available for this feature:
BLAST of Gvermi5120.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J710_9FLOR3.940e-5465.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2V3F7_9STRA3.590e-930.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 16..122
e-value: 5.9E-18
score: 66.8
NoneNo IPR availablePANTHERPTHR31472OS05G0244600 PROTEINcoord: 7..127
NoneNo IPR availablePANTHERPTHR31472:SF5OS05G0244600 PROTEINcoord: 7..127
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 10..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:327392..327943 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5120.t1Gvermi5120.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 327392..327943 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5120.t1 ID=Gvermi5120.t1|Name=Gvermi5120.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=133bp
MTTPRNRLPVYAKLNQMAPGVHGQKLVVQVVSKKTISDSVDKTGKRRCHQ
HVLIADETGAMLLNAHDDFCQQLEVGRVVELHNIRVKIIKDRMRLTMDKW
ASVQESFRAIPQPVQTDPNFSQVVYRQLSARS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold