Gvermi5099.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5099.t1
Unique NameGvermi5099.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length315
Homology
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BLAST of Gvermi5099.t1 vs. uniprot
Match: A0A7S0BI34_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BI34_9RHOD)

HSP 1 Score: 58.5 bits (140), Expect = 2.350e-6
Identity = 27/75 (36.00%), Postives = 48/75 (64.00%), Query Frame = 0 
Query:   72 TNMGDMGGEIRGRLLLSYHDLERALERRGLNRVRIAIGGGLAVVAIVAICWPRIKRWGAAEGAEVAAASLQEQQV 146
            +N  +     R ++L++YHD+E AL+R+G +  R+ +   + +V I A+ W RIK W   EGAEVA+ +L ++++
Sbjct:   67 SNPAEHAARYRDQILVTYHDMEEALKRKGYSITRLTVFLVMGLVGIPALYWNRIKHWSQQEGAEVASKTLGDERL 141
The following BLAST results are available for this feature:
BLAST of Gvermi5099.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S0BI34_9RHOD2.350e-636.00Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..284
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..314
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..103
NoneNo IPR availableTMHMMTMhelixcoord: 104..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:229413..230357 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5099.t1Gvermi5099.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 229413..230357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5099.t1 ID=Gvermi5099.t1|Name=Gvermi5099.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=315bp
MQTAQWRAWRRALSAGATHVSPRASTGSLPLPHGAGLPHRQSLAWRPVSR
AEMGSARSARSGRTARAAAERTNMGDMGGEIRGRLLLSYHDLERALERRG
LNRVRIAIGGGLAVVAIVAICWPRIKRWGAAEGAEVAAASLQEQQVQAQA
GNTLRAVLQDPGTGEEVRTVLRTAVLDLLEDEEITRKATSWAANVLADAI
MTDEMRKVGESYVGAVLSADDTREMARLYVGDAVSAVASNETIQDVVASS
IWAGVRASVVGRRKKVGSDGSGQGEEKAGVRGEQRVEASEGATTPATLAA
GVDEREQLTRRGDD*
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