Gvermi5082.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5082.t1
Unique Name	Gvermi5082.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	384

Homology

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BLAST of Gvermi5082.t1 vs. uniprot
Match: A0A2V3J6K4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K4_9FLOR)

HSP 1 Score: 298 bits (763), Expect = 3.360e-95
Identity = 199/377 (52.79%), Postives = 252/377 (66.84%), Query Frame = 0

Query:   13 IALLLLNLIDPSVAQAPQPRSIPRTPRNEQFFALTQSIFIAGKLTVSSCANQRLAVQACIRTCNSPGPKERDGCCCVIENTNDEPQFYVGVRGGCRYSQRVLNFT--ESFIYESTPIDSDALYFDETTCAFTEENANNDRCTCTLQWEASFEKLNVMSPSPTPTSXXXXXLSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVTPPIGDQTQSPIVSVEPTPL--PMDEAQVSPSNDDELDPSVSVDEDDD------SVCVDQKYLLDRGYSAHHFVHPAGIVSPVLCPQHSQLPCASANHKVRYNGVDMSYSQLCQHDAMACSRDEMIVNSVYSHLWNEVPHGQVVLTMFDTRYAETPQKGLHSIMHAFRTVR 379
            IAL+LL L     A A Q RSIP TP N+QFFAL+QS+   G  + SSC  QR  +  CI+ CN+PGPKER+GCCC++ + +    F+VG+RGGCRY+Q +L F+  ++FIY+ST I+SD   FD+T+CAFTEENAN + CTCTLQWEA+ ++L  +SP PTP++ XXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         P D+  V    D  ++PS+S  +         +VCVD +YL++ GY   H +H  G++SPVLCP+++QLPC SANH +R NGV MSY QLC   A+ C  D + VNSVY+HLWNEV HG  VLTM+D RY E  Q+ LHS+MH  RTVR
Sbjct:    9 IALVLLFLRQ---ASAQQFRSIPTTPENQQFFALSQSLLDQGDFSQSSCGPQRPDLIECIQRCNAPGPKEREGCCCIVADNS----FFVGIRGGCRYNQTILRFSSNDNFIYQSTTINSDKPNFDKTSCAFTEENANRESCTCTLQWEATADRLAAVSPLPTPSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPTDDQTVV-DMDGSVEPSISPGDXXXXXXXXXTVCVDHQYLINAGYPTEHLIHGDGVMSPVLCPRNTQLPCGSANHMIRANGVSMSYLQLCDSPAVECESDHIKVNSVYTHLWNEVAHGDHVLTMYDIRYPERAQRALHSVMHKMRTVR 377

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BLAST of Gvermi5082.t1 vs. uniprot
Match: R7Q3Z9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3Z9_CHOCR)

HSP 1 Score: 145 bits (365), Expect = 2.020e-34
Identity = 71/159 (44.65%), Postives = 101/159 (63.52%), Query Frame = 0

Query:   17 LLNLIDPSVAQAPQPRSIPRTPRNEQFFALTQSIFIAGKLTVSSCANQRLAVQACIRTCNSPGPKERDGCCCVIENTNDEPQFYVGVRGGCRYSQRVLNFTESFIYESTPIDSDALYFDETTCAFTEENANN-DRCTCTLQWEASFEKLNVMSPSPTPT 174
            LL L+    A     R+IP T  N+++FA TQ++F  G  T SSC  +  +++ CIR+CN PG +ER GCCCV      E  F+VG+RGGCRY Q++LNFT   IYES P+D    YFD  +CA   E  ++   CTC++QWEA+ ++L+++ P  +PT
Sbjct:  324 LLLLLPALAASVTTDRAIPGTSANQEYFARTQALFAFGNRTESSCGPEVASIETCIRSCNRPGLQERSGCCCVA---TPERSFFVGLRGGCRYRQQLLNFTSRLIYESKPVDQRRRYFDPISCAPVAEAGDDAGSCTCSIQWEAATDELDLVQPLASPT 479

The following BLAST results are available for this feature:

BLAST of Gvermi5082.t1 vs. uniprot

BLAST of Gvermi5082.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J6K4_9FLOR	3.360e-95	52.79	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q3Z9_CHOCR	2.020e-34	44.65	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..186
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..383
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..18

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24228	contig	ScGOVlb_24228:84643..85794 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5082.t1	Gvermi5082.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24228 84643..85794 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5082.t1 ID=Gvermi5082.t1|Name=Gvermi5082.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=384bp
MLTSSSRVLLALIALLLLNLIDPSVAQAPQPRSIPRTPRNEQFFALTQSI
FIAGKLTVSSCANQRLAVQACIRTCNSPGPKERDGCCCVIENTNDEPQFY
VGVRGGCRYSQRVLNFTESFIYESTPIDSDALYFDETTCAFTEENANNDR
CTCTLQWEASFEKLNVMSPSPTPTSSPSPKLSPSMSIPPIRTAEPTIEVT
PTMQPTPDPATAPTIVTPPIGDQTQSPIVSVEPTPLPMDEAQVSPSNDDE
LDPSVSVDEDDDSVCVDQKYLLDRGYSAHHFVHPAGIVSPVLCPQHSQLP
CASANHKVRYNGVDMSYSQLCQHDAMACSRDEMIVNSVYSHLWNEVPHGQ
VVLTMFDTRYAETPQKGLHSIMHAFRTVRNSLV*