Gvermi4416.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4416.t1
Unique NameGvermi4416.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length190
Homology
BLAST of Gvermi4416.t1 vs. uniprot
Match: A0A2V3J4R1_9FLOR (Putative 5'(3')-deoxyribonucleotidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4R1_9FLOR)

HSP 1 Score: 328 bits (840), Expect = 1.020e-112
Identity = 147/188 (78.19%), Postives = 169/188 (89.89%), Query Frame = 0
Query:    1 MRKVVLVDMDNTLVNWDKEFAKRWAALRPEDSPDIIKHRKHFELEQNFDDDLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQYETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVKPDWEHIVFEQPYNLEVDDRPRMKNWAEWKAVLSNYFDM 188
            M+ VVLVDMDNTLV+WDKEFAKRWA  RP+D+ DIIK R+HFELEQNF+ +LMP+AIEIMS PGF+AALEPQPG+IGA+REMSDAGLHV+ CTAP P QYETCVAEKY WVR+WLGEEFL R++ITRDKT+VKG VLIDDKP VKG+C +P+WEHIVFEQPYNL V  RPRMKNWAEW+AVLS YF++
Sbjct:    6 MQNVVLVDMDNTLVDWDKEFAKRWAEHRPDDAADIIKDRQHFELEQNFNKELMPIAIEIMSQPGFYAALEPQPGAIGAVREMSDAGLHVLFCTAPMPFQYETCVAEKYAWVRQWLGEEFLPRLMITRDKTVVKGRVLIDDKPAVKGRCDEPEWEHIVFEQPYNLGVKGRPRMKNWAEWRAVLSEYFEL 193          
BLAST of Gvermi4416.t1 vs. uniprot
Match: S0F2Z8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2Z8_CHOCR)

HSP 1 Score: 280 bits (717), Expect = 1.550e-89
Identity = 126/186 (67.74%), Postives = 155/186 (83.33%), Query Frame = 0
Query:    3 KVVLVDMDNTLVNWDKEFAKRWAALRPEDSPDIIKHRKHFELEQNFDDDLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQYETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVKPDWEHIVFEQPYNLEVDDRPRMKNWAEWKAVLSNYFDM 188
            KVVLVDMDNTLV++D EF KRW A RP DS D+IK R+HFELEQNF  DL P+AI+IMS PGFF + EPQP ++ AI+EM+ AGLHV+LCTAP P Q+ETCVAEKY WVR+ LGEEFL RI+ITRDKT+VKG VLIDDKP V G C KP+W HIVF+QPYN +V+++PR+K+W +W+ VL N+F++
Sbjct:   59 KVVLVDMDNTLVDFDLEFGKRWVAERPSDSLDLIKQREHFELEQNFSADLKPLAIKIMSQPGFFISFEPQPYAVEAIKEMTAAGLHVLLCTAPLPFQWETCVAEKYAWVRRHLGEEFLTRIIITRDKTVVKGRVLIDDKPRVAGACEKPEWTHIVFDQPYNRKVEEQPRLKSWRDWRPVLQNHFEL 244          
BLAST of Gvermi4416.t1 vs. uniprot
Match: A0A1X6P8Y7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8Y7_PORUM)

HSP 1 Score: 260 bits (664), Expect = 5.520e-86
Identity = 112/182 (61.54%), Postives = 144/182 (79.12%), Query Frame = 0
Query:    1 MRKVVLVDMDNTLVNWDKEFAKRWAALRPEDSPDIIKHRKHFELEQNFDDDLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQYETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVKPDWEHIVFEQPYNLEVDDRPRMKNWAEWKAVL 182
            M+ V+L+DMDNTL N+DKEFAKRW A RP D   +I  RKHFELE+NFD +L P+A++IMST GFF   EP PG++ A++EM DAG  V  CTAPHP QYETCVAEKY WVRK  G+++LARI+ITRDK++VKG+VLIDDKP+VKG C  P+W H++F+  YN EV D+PR+  ++EW+ V+
Sbjct:    1 MKNVILIDMDNTLANFDKEFAKRWVAARPNDETTMITERKHFELEENFDAELAPLAVKIMSTAGFFIDFEPAPGAVTAVQEMLDAGYTVFFCTAPHPFQYETCVAEKYAWVRKHFGDDYLARIIITRDKSVVKGSVLIDDKPLVKGACPDPEWTHVLFQASYNKEVTDKPRLTQFSEWRNVI 182          
BLAST of Gvermi4416.t1 vs. uniprot
Match: A0A5J4Z321_PORPP (Putative 5'(3')-deoxyribonucleotidase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z321_PORPP)

HSP 1 Score: 231 bits (590), Expect = 2.960e-74
Identity = 104/184 (56.52%), Postives = 138/184 (75.00%), Query Frame = 0
Query:    1 MRKVVLVDMDNTLVNWDKEFAKRWAALRPEDSPDIIKHRKHFELEQNF-DDDLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQYETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVKPDWEHIVFEQPYNLEVDD-RPRMKNWAEWKAVL 182
            +R+ VL+DMDNTLV++DKEF KRW  LRP D P+++  RK FELE+NF +DD   +A  IM T GF+   EP PG+I A+REM   GL+V+ CTAPHPLQYE+CV EK+ WVRK+ GEE+L+R++ITRDK+I+KG VLIDDKP V G C  PDW+H+VF + YN++  + + R+  W  W+ VL
Sbjct:   30 LRRTVLIDMDNTLVDFDKEFTKRWLMLRPSDDPNVVLERKLFELEENFANDDDRRLAERIMGTSGFYIEFEPMPGAIQAVREMVRNGLNVVFCTAPHPLQYESCVKEKFAWVRKYFGEEYLSRLIITRDKSIIKGAVLIDDKPKVTGACRSPDWKHVVFTRSYNVDAKETKHRLNQWELWRDVL 213          
BLAST of Gvermi4416.t1 vs. uniprot
Match: M1UX98_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UX98_CYAM1)

HSP 1 Score: 205 bits (521), Expect = 8.220e-64
Identity = 89/182 (48.90%), Postives = 128/182 (70.33%), Query Frame = 0
Query:    2 RKVVLVDMDNTLVNWDKEFAKRWAALRPEDSPDIIKHRKHFELEQNFDDDLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQYETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVKPDWEHIVFEQPYNLEVDDRPRMKNWAEWKAVLS 183
            + ++L+DMDNT+V++D  F KRW  L P     +I+ R+HFELE+N   +   +A +IM  PGF+A+  P  G+I A+R M D    V LC+APHPLQ+E CV +KY WVR+ LG ++L RI+I RDKT V+G+VLIDDKP + G    P+W H+VF+QPYN +V+ R R+ +W++W+ VL+
Sbjct:   30 KPLILIDMDNTIVSFDDAFVKRWKELDPHADEALIRKRQHFELEENLPPEARAIAEKIMGEPGFYASFRPLEGAIVALRAMIDRSWEVRLCSAPHPLQWEDCVRDKYSWVREHLGSDWLHRIMIVRDKTCVRGSVLIDDKPSISGFYPDPEWLHVVFDQPYNRDVEARARLSHWSQWEEVLT 211          
BLAST of Gvermi4416.t1 vs. uniprot
Match: M2XWU3_GALSU (Putative 5'(3')-deoxyribonucleotidase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XWU3_GALSU)

HSP 1 Score: 196 bits (498), Expect = 6.860e-61
Identity = 91/174 (52.30%), Postives = 117/174 (67.24%), Query Frame = 0
Query:    9 MDNTLVNWDKEFAKRWAALRPEDSPDIIKHRKHFELEQNFDDDLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQYETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVKPDWEHIVFEQPYNLEVDDRPRMKNWAEWKAVL 182
            MDN L ++D EF KRW    PE S   +  RK+FELE NF D+    AI +MS  GFF +  P   +I + +EM   GL V +C+AP P Q+E+CV EKY WVR++LGE+FL R++I RDKT+VKGTVLIDDKP V+G    P+W+H+VF QPYNL      RM  W+EW+ VL
Sbjct:    1 MDNVLADFDSEFGKRWKERHPEQSDFDLSQRKYFELEDNFPDEEKEEAIALMSEEGFFLSFPPVQDAIESCKEMVREGLDVRICSAPLPFQWESCVKEKYLWVRRYLGEDFLQRLMIVRDKTLVKGTVLIDDKPQVQGMVKHPEWKHVVFTQPYNLHRQGVIRMNRWSEWRQVL 174          
BLAST of Gvermi4416.t1 vs. uniprot
Match: A0A7J7IHR6_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHR6_9RHOD)

HSP 1 Score: 197 bits (500), Expect = 1.040e-59
Identity = 88/174 (50.57%), Postives = 124/174 (71.26%), Query Frame = 0
Query:    2 RKVVLVDMDNTLVNWDKEFAKRWAALRPEDSPDIIKHRKHFELEQNFDDDLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQYETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVKPDWEHIVFEQPYNLEVDDRPRMKNW 175
            + ++LVDMDNT+V++D  F +RW AL P+   ++I+ R+HFELE+N    L PVA +IM + GF+A+ +P  G+I A++ M      V LCTAPHPLQ+E CV +KY WVR+ LG ++L RI+I RDKT V+G+VLIDDKPVV G   +P+W HI+F+QPYN +     R++ W
Sbjct:    7 KPLILVDMDNTVVSFDDAFIERWKALDPQADENLIRERRHFELEENLPPKLRPVAEKIMGSAGFYASFKPLEGAIQALQAMIAQSWEVRLCTAPHPLQWEDCVRDKYAWVREHLGSDWLHRIIIVRDKTCVRGSVLIDDKPVVTGFYPEPEWAHIIFDQPYNRDAKAMGRLRQW 180          
BLAST of Gvermi4416.t1 vs. uniprot
Match: L1I9Z7_GUITC (Uncharacterized protein (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9Z7_GUITC)

HSP 1 Score: 187 bits (475), Expect = 3.210e-57
Identity = 79/185 (42.70%), Postives = 130/185 (70.27%), Query Frame = 0
Query:    3 KVVLVDMDNTLVNWDKEFAKRWAALRPEDSP-----DIIKHRKHFELEQNFDDDLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQYETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVKPDWEHIVFEQPYNLEVDDRPRMKNWAEWKAVL 182
            + +L+DMDNT+V+WD+EF +R+     + +      +++++RKHFE+E NF + + P  +++++ PGF+ +L P P +I A++EM   G  V L TAPHP     C  +K+ W++++LG+E+L R+++TRDKT++ G VLIDDKP + G C+ P W+HI+FE+ YN++V DR R++ W EWK +L
Sbjct:    1 RFILIDMDNTIVDWDEEFLRRFNESFADLASNLAIEELVRNRKHFEIEDNFPEYVRPAVLQVIAQPGFYRSLRPLPDAIEALQEMLAEGFDVRLVTAPHPCCPGVCCRDKFAWLKEYLGDEWLHRMILTRDKTLILGDVLIDDKPKITGCCI-PIWKHIIFERAYNVDVQDRTRIRAWKEWKKIL 184          
BLAST of Gvermi4416.t1 vs. uniprot
Match: A0A1Y1IL58_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IL58_KLENI)

HSP 1 Score: 190 bits (483), Expect = 6.980e-54
Identity = 89/180 (49.44%), Postives = 123/180 (68.33%), Query Frame = 0
Query:    5 VLVDMDNTLVNWDKEFAKRW-AALRPEDSPDIIKHRKHFELEQNFDDDLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQYETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVKPDWEHIVFEQPYNLEVDDRPRMKNWAEW-KAVL 182
            VLVD+DNT+V+WDKEF KRW AA  P    D+IK RK FE+EQNF+     + I++++ PGF+A LEP P ++ A++ M  +G+ V L T+PHP     C  EKY WV K LG+E+  R++IT DKT V+G +LIDDKP V G  +KP W+H++F   YN +V  +PR+  W +W +AVL
Sbjct:  449 VLVDLDNTVVDWDKEFTKRWIAAGNPASDADVIKKRKRFEIEQNFNAQQTELVIKVIAQPGFYAQLEPFPKALWALQTMLQSGIDVKLVTSPHPCCRAQCTIEKYEWVAKHLGDEWFKRLIITADKTAVRGDILIDDKPAVVGS-MKPQWKHVLFNASYNEKVTGKPRLTAWEDWERAVL 627          
BLAST of Gvermi4416.t1 vs. uniprot
Match: L1IH37_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IH37_GUITC)

HSP 1 Score: 178 bits (451), Expect = 1.120e-53
Identity = 79/182 (43.41%), Postives = 118/182 (64.84%), Query Frame = 0
Query:    9 MDNTLVNWDKEFAKRWAAL------RPEDSPDIIKHRKHFELEQNFDDDLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQYETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVKPDWEHIVFEQPYNLEVDDRPRMKNWAEWKAVLSN 184
            MDNT+V+WD  F KR+         R ++    I++RKHFE+E NFD+      +E++++PGFFA LEP PG+I A++EM + G+ V L TAPHP+    C  EKY ++ +  G +++ R++ITRDKT V G  LIDDKP V G    P W H++F+QPYN +V+ + R+  W  W+ +L++
Sbjct:    1 MDNTVVDWDGMFIKRYGRAIGANEARQQEIESKIRNRKHFEIEHNFDEHERAQVMEVIASPGFFAELEPLPGAIEALKEMVERGVDVRLVTAPHPVCPGPCANEKYDFLLRHFGSDWIDRMIITRDKTHVVGAALIDDKPAVTGSAASPSWNHVLFDQPYNRQVEGKSRLTEWVNWENILAD 182          
The following BLAST results are available for this feature:
BLAST of Gvermi4416.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4R1_9FLOR1.020e-11278.19Putative 5'(3')-deoxyribonucleotidase n=1 Tax=Grac... [more]
S0F2Z8_CHOCR1.550e-8967.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P8Y7_PORUM5.520e-8661.54Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z321_PORPP2.960e-7456.52Putative 5'(3')-deoxyribonucleotidase n=1 Tax=Porp... [more]
M1UX98_CYAM18.220e-6448.90Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
M2XWU3_GALSU6.860e-6152.30Putative 5'(3')-deoxyribonucleotidase n=1 Tax=Gald... [more]
A0A7J7IHR6_9RHOD1.040e-5950.57Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
L1I9Z7_GUITC3.210e-5742.70Uncharacterized protein (Fragment) n=2 Tax=Guillar... [more]
A0A1Y1IL58_KLENI6.980e-5449.44Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
L1IH37_GUITC1.120e-5343.41Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 6..181
e-value: 8.2E-58
score: 197.4
IPR0107085'(3')-deoxyribonucleotidasePFAMPF06941NT5Ccoord: 2..179
e-value: 1.1E-19
score: 71.0
NoneNo IPR availableGENE3D1.10.40.40Deoxyribonucleotidase; domain 2coord: 16..67
e-value: 8.2E-58
score: 197.4
NoneNo IPR availableSFLDSFLDG01126C1.2:_Nucleotidase_Likecoord: 2..182
e-value: 0.0
score: 179.9
NoneNo IPR availableSFLDSFLDG01145C1.2.1coord: 2..182
e-value: 0.0
score: 179.9
NoneNo IPR availablePANTHERPTHR165045'(3')-DEOXYRIBONUCLEOTIDASEcoord: 3..182
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 1..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1658821..1659390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4416.t1Gvermi4416.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1658821..1659390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4416.t1 ID=Gvermi4416.t1|Name=Gvermi4416.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=190bp
MRKVVLVDMDNTLVNWDKEFAKRWAALRPEDSPDIIKHRKHFELEQNFDD
DLMPVAIEIMSTPGFFAALEPQPGSIGAIREMSDAGLHVMLCTAPHPLQY
ETCVAEKYGWVRKWLGEEFLARIVITRDKTIVKGTVLIDDKPVVKGKCVK
PDWEHIVFEQPYNLEVDDRPRMKNWAEWKAVLSNYFDMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR0107085'(3')-deoxyribonucleotidase
IPR036412HAD-like_sf