Gvermi4410.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4410.t1
Unique NameGvermi4410.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length264
Homology
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BLAST of Gvermi4410.t1 vs. uniprot
Match: A0A2V3J1Q9_9FLOR (Kinetochore protein SPC25 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Q9_9FLOR)

HSP 1 Score: 209 bits (533), Expect = 4.930e-64
Identity = 116/243 (47.74%), Postives = 168/243 (69.14%), Query Frame = 0 
Query:   14 VDNLIAANMNENLEKINRYMSLMDQRTEESTRAAREGARILEQLAEKVIQQDQKRHNIYMTAMSDRKENLEKEQALCKFAEDALKAREGQVRLLDMQKGELEEAIEGLREKLSSLPYERKRYEEKLKEEDRRLRSGRHVTEERLKRVNQVLRRNEESMRKFEAFLGVKVRAVDDKCLEFTFSHIKNGDPHKKFKVIVLSHDRRFSATECDPEIENFAELKEQLLEDGQLIDFLHKVRKSFKLH 256
            +D +  A +N  LEKINR M+++D+ TE+S +AA    RILE+LA+K+IQ+D+KR  +Y+T MSD KEN+EKEQA+  +A + L++   + R L  Q GEL +A+  LREK+ ++P E++R E +L EEDRRL+  +   ++RL  V  V+ R  +S+R+FE  LGVK+RA+ DKC+EF+F  I   DP  +FKV V + D RF AT C P +E F ELK+ L ED +LIDFL+++R +F  H
Sbjct:    1 MDKVTTARVNTALEKINRMMTMIDEYTEDSVQAAYNSGRILEELADKLIQKDKKRRTMYLTTMSDCKENVEKEQAMYNYANETLESLRNKERQLQSQAGELRDAVHTLREKVQTVPLEKRRNEARLLEEDRRLKDQKLSVDKRLNHVKSVVHRTSDSVRRFEDLLGVKLRAIRDKCIEFSFICIDEEDPFAEFKVTVDNRDGRFRATVCVPLVEEFGELKQTLAEDDELIDFLYRIRIAFNGH 243
The following BLAST results are available for this feature:
BLAST of Gvermi4410.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1Q9_9FLOR4.930e-6447.74Kinetochore protein SPC25 n=1 Tax=Gracilariopsis c... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..124
NoneNo IPR availableGENE3D3.30.457.50Chromosome segregation protein Spc25coord: 160..258
e-value: 3.8E-17
score: 64.1
NoneNo IPR availablePANTHERPTHR14281:SF0KINETOCHORE PROTEIN SPC25coord: 16..256
IPR013255Chromosome segregation protein Spc25, C-terminalPFAMPF08234Spindle_Spc25coord: 185..254
e-value: 3.9E-13
score: 49.4
IPR045143Kinetochore protein Spc25PANTHERPTHR14281KINETOCHORE PROTEIN SPC25-RELATEDcoord: 16..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1560786..1561762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4410.t1Gvermi4410.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1560786..1561762 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4410.t1 ID=Gvermi4410.t1|Name=Gvermi4410.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=264bp
MSNSSGILETAVRVDNLIAANMNENLEKINRYMSLMDQRTEESTRAAREG
ARILEQLAEKVIQQDQKRHNIYMTAMSDRKENLEKEQALCKFAEDALKAR
EGQVRLLDMQKGELEEAIEGLREKLSSLPYERKRYEEKLKEEDRRLRSGR
HVTEERLKRVNQVLRRNEESMRKFEAFLGVKVRAVDDKCLEFTFSHIKNG
DPHKKFKVIVLSHDRRFSATECDPEIENFAELKEQLLEDGQLIDFLHKVR
KSFKLHELAHEFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013255Spc25_C
IPR045143Spc25