Gvermi4405.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4405.t1
Unique NameGvermi4405.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length170
Homology
BLAST of Gvermi4405.t1 vs. uniprot
Match: A0A2V3J1Q6_9FLOR (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Q6_9FLOR)

HSP 1 Score: 290 bits (742), Expect = 4.380e-97
Identity = 136/165 (82.42%), Postives = 157/165 (95.15%), Query Frame = 0
Query:    1 MLAQLCSHGLFDLHLRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGIRRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFYHAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSIPSSKGVLTDAAALES 165
            MLAQLCSHGLFDL+LRAKGDLWIDDHHTNED+ ITLG+A++ AL++KKGIRRFGHFVAPLDESLVEVVLDFSGR +C Y L IPTQRVGTYDTQLVREFYHA+A NAQ+TLHV+QR+G+NSHHIIEASFK+FARA+RMA+E+DPR +++IPSSKGVLTDAAAL+S
Sbjct:   94 MLAQLCSHGLFDLYLRAKGDLWIDDHHTNEDIGITLGMAIAKALSNKKGIRRFGHFVAPLDESLVEVVLDFSGRAHCEYALQIPTQRVGTYDTQLVREFYHALAGNAQMTLHVVQRAGLNSHHIIEASFKAFARAIRMAVEFDPRRLDTIPSSKGVLTDAAALDS 258          
BLAST of Gvermi4405.t1 vs. uniprot
Match: S0F2Y2_CHOCR (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2Y2_CHOCR)

HSP 1 Score: 263 bits (673), Expect = 1.590e-86
Identity = 127/164 (77.44%), Postives = 143/164 (87.20%), Query Frame = 0
Query:    1 MLAQLCSHGLFDLHLRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGIRRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFYHAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSIPSSKGVLTDAAALE 164
            ML QL SHGL DLH+RA GD WIDDHHTNEDV ITLG+A++ AL DKKGIRRFGHFVAPLDESL+EVVLDFSGRP+  Y L IPT++VG YDTQLVREFY AVA NAQ+TLHV QR+G+NSHHIIEASFK+FARAMRMA+E DPR ++SIPSSKG LTD  AL+
Sbjct:  107 MLHQLSSHGLLDLHIRADGDYWIDDHHTNEDVGITLGMAIAKALGDKKGIRRFGHFVAPLDESLIEVVLDFSGRPHVEYGLQIPTEKVGKYDTQLVREFYMAVAGNAQMTLHVNQRAGLNSHHIIEASFKAFARAMRMAVELDPRRLDSIPSSKGALTDDVALQ 270          
BLAST of Gvermi4405.t1 vs. uniprot
Match: A0A5J4YYU8_PORPP (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYU8_PORPP)

HSP 1 Score: 257 bits (657), Expect = 5.040e-84
Identity = 126/168 (75.00%), Postives = 143/168 (85.12%), Query Frame = 0
Query:    1 MLAQLCSHGLFDLHLRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGIRRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFYHAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSIPSSKGVLTDAAALESSPT 168
            ML QL SHGL DL++RA+GD  IDDHHTNEDV ITLG+A++ AL DKKGIRRFGHF+APLDE+LVEVVLDFSGRP+  Y L IPT+R+G +DTQLVREFY AVA NAQIT+HV Q SGINSHHI+EASFK+FARAMRMALE DPR +  IPSSKGVLTDA  LE + T
Sbjct:  104 MLNQLSSHGLLDLNIRARGDYHIDDHHTNEDVGITLGMAIAKALGDKKGIRRFGHFIAPLDEALVEVVLDFSGRPHLEYGLKIPTERIGKFDTQLVREFYSAVAGNAQITIHVRQLSGINSHHIVEASFKAFARAMRMALELDPRRLGGIPSSKGVLTDAQGLEQAKT 271          
BLAST of Gvermi4405.t1 vs. uniprot
Match: A0A7S0BFF9_9RHOD (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFF9_9RHOD)

HSP 1 Score: 238 bits (607), Expect = 3.950e-78
Identity = 117/149 (78.52%), Postives = 132/149 (88.59%), Query Frame = 0
Query:   15 LRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGIRRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFYHAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSIPSSKGVLTDAAAL 163
            ++AKGD  IDDHHTNEDV I+LG+AL+ AL DKKGIRRFGHFVAPLDE+LVEVVLDFSGR Y  Y LDIPT+RVGTY+TQLVREFY AVA+NAQ+TLH+ Q  GINSHHIIEASFK+FARAMRMALE+DPR + S+PSSKGVLTD  AL
Sbjct:    1 IQAKGDYHIDDHHTNEDVGISLGMALAKALGDKKGIRRFGHFVAPLDEALVEVVLDFSGRQYLAYGLDIPTERVGTYETQLVREFYAAVASNAQMTLHIRQLDGINSHHIIEASFKAFARAMRMALEHDPRRLGSVPSSKGVLTDEQAL 149          
BLAST of Gvermi4405.t1 vs. uniprot
Match: A0A7S1XFR8_9RHOD (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFR8_9RHOD)

HSP 1 Score: 239 bits (611), Expect = 2.810e-77
Identity = 121/159 (76.10%), Postives = 132/159 (83.02%), Query Frame = 0
Query:    1 MLAQLCSHGLFDLHLRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGIRRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFYHAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSIPSSKGVLTD 159
            ML QL SHGL DL + AKGDL IDDHHTNEDV I LG A+  AL  K GI RFGHF APLDESLVEV LDFSGR Y  Y L+IPTQRVGTYDTQLVREFY AVA+NA++TLH+ Q SGINSHHIIEASFKSFARAMRMALEYDPR + +IPSSKG+L +
Sbjct:  101 MLNQLSSHGLVDLKILAKGDLHIDDHHTNEDVGIALGEAIRVALGSKAGIARFGHFAAPLDESLVEVTLDFSGREYLGYGLEIPTQRVGTYDTQLVREFYAAVASNARMTLHIRQLSGINSHHIIEASFKSFARAMRMALEYDPRRMGTIPSSKGLLAE 259          
BLAST of Gvermi4405.t1 vs. uniprot
Match: A0A846A098_9CYAN (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846A098_9CYAN)

HSP 1 Score: 238 bits (606), Expect = 3.500e-77
Identity = 116/157 (73.89%), Postives = 134/157 (85.35%), Query Frame = 0
Query:    1 MLAQLCSHGLFDLHLRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGIRRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFYHAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSIPSSKGVL 157
            ML Q+ SHGLFDL ++AKGD+ IDDHHTNEDV ITLG+AL  AL D+KGI RFGHFVAPLDESLV+V LDFSGRP+  Y L+IPTQRVGTYDTQLVREF+ AV  ++Q+TLH+ Q  GINSHHIIEA+FK+FAR+MRMA E DPR  N+IPSSKGVL
Sbjct:   56 MLHQIASHGLFDLDVQAKGDIEIDDHHTNEDVGITLGMALKEALGDRKGIVRFGHFVAPLDESLVQVALDFSGRPHLSYGLEIPTQRVGTYDTQLVREFFVAVVNHSQMTLHIRQLDGINSHHIIEATFKAFARSMRMAAEVDPRRANTIPSSKGVL 212          
BLAST of Gvermi4405.t1 vs. uniprot
Match: UPI001682F6F0 (imidazoleglycerol-phosphate dehydratase HisB n=1 Tax=Oscillatoria sp. FACHB-1407 TaxID=2692847 RepID=UPI001682F6F0)

HSP 1 Score: 236 bits (603), Expect = 1.140e-76
Identity = 115/157 (73.25%), Postives = 135/157 (85.99%), Query Frame = 0
Query:    1 MLAQLCSHGLFDLHLRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGIRRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFYHAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSIPSSKGVL 157
            ML Q+ SHGL DL ++AKGDL IDDHHTNEDV ITLG AL+ AL D+KGI RFGHFVAPLDE+LV+VVLDFSGRP+  Y L+IPTQRVGTYDTQLVREF+ A+  +AQ+TLH+ Q  GINSHHIIEA+FK+FARA+RMA+E DPR  ++IPSSKGVL
Sbjct:   60 MLDQIASHGLIDLDVQAKGDLHIDDHHTNEDVGITLGQALAKALGDRKGITRFGHFVAPLDEALVQVVLDFSGRPHLSYGLEIPTQRVGTYDTQLVREFFVAIVNHAQMTLHIRQMDGINSHHIIEATFKAFARALRMAVEIDPRRAHTIPSSKGVL 216          
BLAST of Gvermi4405.t1 vs. uniprot
Match: K9F072_9CYAN (Imidazoleglycerol-phosphate dehydratase n=8 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9F072_9CYAN)

HSP 1 Score: 237 bits (604), Expect = 1.550e-76
Identity = 116/157 (73.89%), Postives = 133/157 (84.71%), Query Frame = 0
Query:    1 MLAQLCSHGLFDLHLRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGIRRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFYHAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSIPSSKGVL 157
            ML Q+ SHGLFDL ++AKGDL IDDHHTNEDV ITLG+AL  AL ++KGI RFGHFVAPLDESL++V LDFSGRPY  Y LDIPTQRVGTYDTQLVREF+ A+  ++ +TLH+ Q  GINSHHIIEA+FK+FARAMRMA E DPR  N+IPSSKGVL
Sbjct:   78 MLHQIASHGLFDLDIQAKGDLEIDDHHTNEDVGITLGMALHQALGNRKGIVRFGHFVAPLDESLIQVSLDFSGRPYLAYGLDIPTQRVGTYDTQLVREFFMAIVHHSLMTLHIRQLDGINSHHIIEATFKAFARAMRMATEIDPRRANAIPSSKGVL 234          
BLAST of Gvermi4405.t1 vs. uniprot
Match: A0A251W9T4_9CYAN (Imidazoleglycerol-phosphate dehydratase n=2 Tax=unclassified Alkalinema TaxID=2635015 RepID=A0A251W9T4_9CYAN)

HSP 1 Score: 236 bits (601), Expect = 1.890e-76
Identity = 115/157 (73.25%), Postives = 133/157 (84.71%), Query Frame = 0
Query:    1 MLAQLCSHGLFDLHLRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGIRRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFYHAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSIPSSKGVL 157
            ML Q+ SHGLFDL ++A GDL IDDHHTNEDV ITLG+AL+ AL D+KGI RFGHF+APLDESLV+V LDFSGRP+  Y LDIPTQRVGTYDTQLVREF+ A+  +AQ+TLH+ Q  G+NSHHIIEA+FK+FARAMRMA E DPR  + IPSSKGVL
Sbjct:   54 MLHQISSHGLFDLDIQATGDLHIDDHHTNEDVGITLGMALAKALGDRKGIVRFGHFLAPLDESLVQVALDFSGRPHLAYGLDIPTQRVGTYDTQLVREFFVAIVNHAQMTLHIRQLDGLNSHHIIEATFKAFARAMRMATEVDPRRAHEIPSSKGVL 210          
BLAST of Gvermi4405.t1 vs. uniprot
Match: UPI00198086EC (imidazoleglycerol-phosphate dehydratase HisB n=1 Tax=Leptolyngbya sp. BC1307 TaxID=2029589 RepID=UPI00198086EC)

HSP 1 Score: 236 bits (602), Expect = 1.910e-76
Identity = 114/157 (72.61%), Postives = 133/157 (84.71%), Query Frame = 0
Query:    1 MLAQLCSHGLFDLHLRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGIRRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFYHAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSIPSSKGVL 157
            ML Q+ SHGLFDL +RA GD+ IDDHHTNEDV ITLG+AL  AL D+KGI RFGHFVAPLDE+LV++ LDFSGRP+  Y L+IPTQRVGTYDTQLVREF+ A+  +AQ+TLH+ Q SGINSHHIIEA+FK+FARAMRMA E DPR   +IPSSKGV+
Sbjct:   65 MLHQIASHGLFDLEVRATGDIEIDDHHTNEDVGITLGMALHQALGDRKGITRFGHFVAPLDEALVQIALDFSGRPHLSYGLEIPTQRVGTYDTQLVREFFVAIINHAQLTLHIRQLSGINSHHIIEATFKAFARAMRMATETDPRRAGTIPSSKGVI 221          
The following BLAST results are available for this feature:
BLAST of Gvermi4405.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1Q6_9FLOR4.380e-9782.42Imidazoleglycerol-phosphate dehydratase n=1 Tax=Gr... [more]
S0F2Y2_CHOCR1.590e-8677.44Imidazoleglycerol-phosphate dehydratase n=1 Tax=Ch... [more]
A0A5J4YYU8_PORPP5.040e-8475.00Imidazoleglycerol-phosphate dehydratase n=1 Tax=Po... [more]
A0A7S0BFF9_9RHOD3.950e-7878.52Imidazoleglycerol-phosphate dehydratase n=1 Tax=Rh... [more]
A0A7S1XFR8_9RHOD2.810e-7776.10Imidazoleglycerol-phosphate dehydratase n=1 Tax=Co... [more]
A0A846A098_9CYAN3.500e-7773.89Imidazoleglycerol-phosphate dehydratase n=1 Tax=Le... [more]
UPI001682F6F01.140e-7673.25imidazoleglycerol-phosphate dehydratase HisB n=1 T... [more]
K9F072_9CYAN1.550e-7673.89Imidazoleglycerol-phosphate dehydratase n=8 Tax=Le... [more]
A0A251W9T4_9CYAN1.890e-7673.25Imidazoleglycerol-phosphate dehydratase n=2 Tax=un... [more]
UPI00198086EC1.910e-7672.61imidazoleglycerol-phosphate dehydratase HisB n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000807Imidazoleglycerol-phosphate dehydratasePFAMPF00475IGPDcoord: 1..136
e-value: 4.5E-55
score: 185.9
IPR000807Imidazoleglycerol-phosphate dehydratasePANTHERPTHR23133IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7coord: 1..157
IPR000807Imidazoleglycerol-phosphate dehydrataseCDDcd07914IGPDcoord: 1..157
e-value: 5.70109E-90
score: 258.484
IPR038494Imidazole glycerol phosphate dehydratase domain superfamilyGENE3D3.30.230.40Imidazole glycerol phosphate dehydratase; domain 1coord: 1..51
e-value: 1.9E-18
score: 68.2
IPR038494Imidazole glycerol phosphate dehydratase domain superfamilyGENE3D3.30.230.40Imidazole glycerol phosphate dehydratase; domain 1coord: 52..159
e-value: 7.4E-41
score: 140.5
IPR020565Imidazoleglycerol-phosphate dehydratase, conserved sitePROSITEPS00954IGP_DEHYDRATASE_1coord: 23..36
IPR020565Imidazoleglycerol-phosphate dehydratase, conserved sitePROSITEPS00955IGP_DEHYDRATASE_2coord: 118..130
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 49..141
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1550335..1550844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4405.t1Gvermi4405.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1550335..1550844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4405.t1 ID=Gvermi4405.t1|Name=Gvermi4405.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=170bp
MLAQLCSHGLFDLHLRAKGDLWIDDHHTNEDVAITLGIALSNALADKKGI
RRFGHFVAPLDESLVEVVLDFSGRPYCHYLLDIPTQRVGTYDTQLVREFY
HAVAANAQITLHVIQRSGINSHHIIEASFKSFARAMRMALEYDPRAINSI
PSSKGVLTDAAALESSPTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000807ImidazoleglycerolP_deHydtase
IPR038494IGPD_sf
IPR020565ImidazoleglycerP_deHydtase_CS
IPR020568Ribosomal_S5_D2-typ_fold