Gvermi4404.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4404.t1
Unique NameGvermi4404.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length398
Homology
BLAST of Gvermi4404.t1 vs. uniprot
Match: A0A2V3J2Y5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Y5_9FLOR)

HSP 1 Score: 407 bits (1045), Expect = 1.520e-137
Identity = 207/356 (58.15%), Postives = 265/356 (74.44%), Query Frame = 0
Query:   34 AKRSPVDSKPVGLPSAVTSRDIVQENHAMDTVVNPLVRTFPVQKPTFLQRVVTWFKQALPFRSSAAQDELSSDFIPSSSRSSHTDFREARVADVDVAFQNPFAPRALRGVALLFHGCSQSAKDWFQLPEHKMISFHLLKKRFALLALTSQNRVTGCWSTRFPGGENDDVMRVKVAVRQWVAEQGLAESTALIGVGVSSGATLLSILSLDLPIVSQALYLSAGNQRALRNATSKYPSTLFVHQANDHYYAPPSSISASRHILVRKKVAMVGELSLERVPFTGTTFHEHEPLVTKQVSQQIYEAADQSERKVAQVLRANKLSDESLQRSVLQIARVMRGAHELSAMHVDKVTKWLAAQ 389
            +++S +D+K + L S+ T       +  ++   +  V+T   QKP  +QRV  WF++ LPF   +     S   IP S  +  + FR  R+ DVD A+ NPFAP  LRGVALLFHGCSQ+A+DWF LPEHK++S  LL++RFALLALTSQNRVTGCWSTRFP  EN+DVMRVKVAVRQW+ E  +A +  +  +GVSSGAT+LS+L+ +LPI SQALY+S GNQRALRNA+ KYPSTLFVH A D YYAPPSSI+A+R  LVR+ VA+VGELSL  VPFT TTFH+HEP +TK+VSQ++YEAA ++E K+A+VLR   L+  +++R  LQIARV+RG HELSA+H DKV KWL +Q
Sbjct:   27 SQQSLLDTKSLNLSSSRTIDKPANPDRTLNAS-SSQVQTPKEQKPGVVQRVAAWFRKLLPFPLLSRDHGYSDGAIPLSGHTLESGFRSVRIGDVDGAYSNPFAPTKLRGVALLFHGCSQNAEDWFSLPEHKLVSSELLRQRFALLALTSQNRVTGCWSTRFPSRENEDVMRVKVAVRQWMTEHQIASAVPITALGVSSGATMLSVLAHELPIASQALYISPGNQRALRNASDKYPSTLFVHLATDQYYAPPSSIAAARRTLVRRNVALVGELSLPNVPFTATTFHDHEPQLTKEVSQRLYEAAQRNENKIAKVLRGEALTKAAIRRGALQIARVLRGGHELSALHADKVAKWLGSQ 381          
BLAST of Gvermi4404.t1 vs. uniprot
Match: A0A2V3J2J6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J6_9FLOR)

HSP 1 Score: 360 bits (924), Expect = 1.250e-118
Identity = 184/329 (55.93%), Postives = 241/329 (73.25%), Query Frame = 0
Query:   67 NPLVRTFPVQKPTFLQRVVTWFKQALPFRSSA---AQDE---LSSDFIPSSSRSSHTDFREARVADVDVAFQNPFAPRALRGVALLFHGCSQSAKDWFQLPEHKMISFHLLKKRFALLALTSQNRVTGCWSTRFPGGENDDVMRVKVAVRQWVAEQGLAESTALIGVGVSSGATLLSILSLDLPIVSQALYLSAGNQRALRNATSKYPSTLFVHQANDHYYAPPSSISASRHILVRKKVAMVGELSLERVPFTGTTFHEHEPLVTKQVSQQIYEAADQSERKVAQVLRANKLSDESLQRSVLQIARVMRGAHELSAMHVDKVTKWLAAQ 389
            NPL+RT  V    FL R+ TW +   P  SS    +QD+   LSSD + +S       F   R+ ++D+A+ NP++ R L+GVALL HGCSQ A+DWF LPEHK+IS  LL++RFALLALTSQNRVTGCWSTRFPG EN+DV++ K  VRQW  +  +  S  LI VG+SSGA +LS+L+ ++PIVSQALY+S GNQRALR+AT  YP TLFVH A D +YAPP +I+A+R  LVR+ VA+VGEL L  VPFT TTFHEHEP  TK++S++IYEAA ++  K+  VLR ++LS  ++ RS LQIARV+RG++E+S +H D V +WLA++
Sbjct:   99 NPLIRTSSVPDFGFLDRITTWLRSVFPSHSSKEGNSQDKSVHLSSDPLEAS-------FHSTRIGNLDIAYSNPYSTRKLQGVALLIHGCSQQAEDWFILPEHKLISSELLRQRFALLALTSQNRVTGCWSTRFPGRENEDVVQAKATVRQWWTKHRIPSSLPLIAVGISSGANMLSVLAHEIPIVSQALYISPGNQRALRSATENYPCTLFVHLATDRFYAPPKAIAAARRTLVRRNVALVGELPLPLVPFTSTTFHEHEPRFTKEISRRIYEAARKNGNKIMDVLREDELSQSAMHRSALQIARVIRGSNEISGLHADIVARWLASK 420          
BLAST of Gvermi4404.t1 vs. uniprot
Match: S0F381_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F381_CHOCR)

HSP 1 Score: 260 bits (665), Expect = 8.090e-80
Identity = 151/352 (42.90%), Postives = 217/352 (61.65%), Query Frame = 0
Query:   72 TFPVQKPT--------FLQRVVTWFKQALPFRSSAAQDELSSDFIPS--------------SSRSSHTDFREARVADVDVAFQNPFAPRALRGVALLFHGCSQSAKDWFQLPEHKMISFHLLKKRFALLALTSQNRVTGCWSTRFPGGENDDVMRVKVAVRQWVAEQGLAESTALIGVGVSSGATLLSILSL--DLP-IVSQALYLSAGNQRALRNATSKYPSTLFVHQANDHYYAPPSSISASRHILVRKKVAMVGELSLERVPFTGTTFHEHEPLVTKQVSQQIYEAADQSE-RKVAQVLRANKLSDESL---------QRSVLQIARVMRGAHELSAMHVDKVTKWLAA 388
            +F  Q PT        FL+++  WF+    F S   +  LS+D  PS              SS+   T ++   +  ++VAF NPF  R LRG+ALL HGC Q A DWFQLPEH+ I+ HLL+KR ALLA+TS NRVTGCWSTR+P  EN+DV RV +A ++W  ++ +  +  +  VG+SSGAT+LSILS   ++P +V QALY+S G+QRAL NAT  YPSTLFV    D +YA  S+I+ +R  L+ + V MVGEL++ +V    TT H  EP ++ ++S++I+EAA   +  K+   ++ +  SDE +         +R+ +Q+ RV++G HE+SA+  +KV  WL A
Sbjct:   67 SFSTQPPTSAALTVSRFLRKLDLWFQG---FWSPLGRHYLSTDTSPSLPSRPRFELVFDVDSSKDKKT-YQTGEINGINVAFHNPFPARRLRGIALLIHGCRQQASDWFQLPEHRHIAAHLLRKRLALLAVTSSNRVTGCWSTRYPHWENEDVSRVMIATKRWRVDRTIPSTAPIYAVGISSGATMLSILSSSNEMPSMVGQALYISPGSQRALNNATKSYPSTLFVRLTTDRHYASASAIALARRALLTRNVPMVGELTMPKVQLMPTTLHHREPRISAEISRKIFEAATHGQYHKIEHAMKTS--SDEEIVAFWRSRDSRRAAVQVMRVVQGLHEVSAVCAEKVADWLIA 412          
BLAST of Gvermi4404.t1 vs. uniprot
Match: A0A0Q3JBP8_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3JBP8_BRADI)

HSP 1 Score: 65.9 bits (159), Expect = 3.890e-8
Identity = 60/209 (28.71%), Postives = 93/209 (44.50%), Query Frame = 0
Query:  134 PFAPRALRGVALLFHGC----------SQSAKDWFQLPEHKMISFHLLKKRFALLALTSQNRVTGCWSTRFPGGENDDVMRVKVAVRQWVAEQGLAESTALIGVGVSSGATLLSILSLDLPIVSQALYLSAGNQRALRNATSKYPSTLFVHQANDHYYAPPSSISASRHILVRKKVAMVGELSLERVPFTGTTFHEHEPLVTKQVSQQI 332
            P AP   R V  + HGC          SQS      LPE   I+   L++RFA+LA+ S      CWS         +V   K A++ W A+ GL E      +G SSG   +S L+ ++ + +  + +S G       A + YP  +F+H   DH  A  +S+  +  +L R     V E+    +P T T   +  P +   +S++I
Sbjct:  130 PAAPA--RAVLFVAHGCRCRPENFWPPSQSCPGCVGLPEDVAITARALRRRFAVLAVASNEE---CWSLE------QEVGATKRAIQSWTAKNGLGERPVF-ALGASSGGYFVSRLATEMNLAAVVIMISEG-AFGPAGAPAGYPPAMFLHMPKDHRRA--ASVERNMKML-RGNGVEVKEVRSVELPLTPTLLSDRIPGLDHGLSERI 322          
BLAST of Gvermi4404.t1 vs. uniprot
Match: A0A2P6TQY5_CHLSO (UMP kinase n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQY5_CHLSO)

HSP 1 Score: 65.5 bits (158), Expect = 1.030e-7
Identity = 63/219 (28.77%), Postives = 100/219 (45.66%), Query Frame = 0
Query:  137 PRALRGVALLFHGCSQSAKDWFQ----------LPEHKMISFHLLKKRFALLALTSQNRVTGCWSTRFPGGENDDVMRVKVAVRQWVAEQGLAESTALIGVGVSSGATLLSILSLDLP-------IVSQALYLSAGNQRALRNATSKYPSTLFVHQANDHYYAPPSSISASRHILVRKK----VAMVGELSLERVPFTGTTFHEHEPLVTKQVSQQIYE 334
            P+  RG  L  HGC  S  ++F           LPE    S   L++ +A++A++S +R TGCWS       N+D   V   ++ ++  QGL +     G G+SSGA+ L    L LP       I+S+AL +            +KYP T++V    D   A    I A+R  L R +    V  V E  +    F+     +  P ++K+++Q ++E
Sbjct:  791 PKNPRGTVLFVHGCVHSGYNYFPQSKQCNACRGLPEQLSHSLQALRRGYAVIAISSADRDTGCWSW------NEDGWDVAQLLKGFLRNQGL-DDKPFYGAGISSGASFL----LKLPRYIKMDGIMSEALGIDEDAWGLWE--VNKYPPTIYVSMVRDTPTA--KKIEANRKELTRMRTPVEVIQVEERKVYPTYFSDRFPSKITPELSKEIAQGLFE 994          
BLAST of Gvermi4404.t1 vs. uniprot
Match: E1Z7F9_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z7F9_CHLVA)

HSP 1 Score: 62.4 bits (150), Expect = 7.620e-7
Identity = 47/147 (31.97%), Postives = 67/147 (45.58%), Query Frame = 0
Query:  137 PRALRGVALLFHGCSQSAKDWFQ----------LPEHKMISFHLLKKRFALLALTSQNRVTGCWSTRFPGGENDDVMRVKVAVRQWVAEQGLAESTALIGVGVSSGATLLSILSLDLPIVSQALYLSAGNQRALRNATSKYPSTLFV 273
            P A +G  +LFHGC  S  ++F           LPE    +   L + +A++A++S +R TGCWS       + D   VK  VR+W  E  L +   L G+G+SSGA+     +L +P                R     YP TLFV
Sbjct:   86 PEAPKGAVVLFHGCVHSGYNYFPRSAACLDCRGLPEEMSHTLQALNRGYAVIAISSADRDTGCWSW------DSDSDGVKALVREWQREHRLRD-LPLYGMGISSGASF----ALKIP----------------RWLNMSYPPTLFV 205          
BLAST of Gvermi4404.t1 vs. uniprot
Match: E1Z716_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z716_CHLVA)

HSP 1 Score: 58.5 bits (140), Expect = 7.240e-6
Identity = 44/136 (32.35%), Postives = 71/136 (52.21%), Query Frame = 0
Query:  108 IPSSSRSSHTDFREARVA-DVDVAFQNPFAPRALRGVALLFHGCSQSAKDWFQ----------LPEHKMISFHLLKKRFALLALTSQNRVTGCWSTRFPGGENDDVMRVKVAVRQWVAEQGLAESTALIGVGVSSG 232
            +P  S ++ TD+ + RV  D++  ++    P  + GV L+ HGCS  A D++           LPE   I    L++ +A++A++S NR +GCW        ++D+ R+   VR+ V E+GL E   L   G SSG
Sbjct:   35 LPLLSGNNATDWPQFRVIRDLETLWE---VPDQVGGVLLVAHGCSHQAGDFWPASQRCPGCLGLPEEMAIRATALRRGYAVIAVSSYNRSSGCWHNT-QASRSEDLQRLPDIVREVVREEGL-EGLPLFLFGASSG 165          
The following BLAST results are available for this feature:
BLAST of Gvermi4404.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J2Y5_9FLOR1.520e-13758.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J2J6_9FLOR1.250e-11855.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
S0F381_CHOCR8.090e-8042.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0Q3JBP8_BRADI3.890e-828.71Uncharacterized protein n=1 Tax=Brachypodium dista... [more]
A0A2P6TQY5_CHLSO1.030e-728.77UMP kinase n=2 Tax=Chlorella sorokiniana TaxID=307... [more]
E1Z7F9_CHLVA7.620e-731.97Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
E1Z716_CHLVA7.240e-632.35Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820alpha/beta hydrolasecoord: 135..395
e-value: 5.3E-8
score: 34.9
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 141..286
NoneNo IPR availablePANTHERPTHR35128SECRETION-REGULATING GUANINE NUCLEOTIDE EXCHANGE FACTORcoord: 121..389
NoneNo IPR availablePANTHERPTHR35128:SF1SECRETION-REGULATING GUANINE NUCLEOTIDE EXCHANGE FACTORcoord: 121..389
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..397
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1549118..1550311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4404.t1Gvermi4404.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1549118..1550311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4404.t1 ID=Gvermi4404.t1|Name=Gvermi4404.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=398bp
MNPRTKCVSLYILIFLTVPILSKLIPVVHTSAQAKRSPVDSKPVGLPSAV
TSRDIVQENHAMDTVVNPLVRTFPVQKPTFLQRVVTWFKQALPFRSSAAQ
DELSSDFIPSSSRSSHTDFREARVADVDVAFQNPFAPRALRGVALLFHGC
SQSAKDWFQLPEHKMISFHLLKKRFALLALTSQNRVTGCWSTRFPGGEND
DVMRVKVAVRQWVAEQGLAESTALIGVGVSSGATLLSILSLDLPIVSQAL
YLSAGNQRALRNATSKYPSTLFVHQANDHYYAPPSSISASRHILVRKKVA
MVGELSLERVPFTGTTFHEHEPLVTKQVSQQIYEAADQSERKVAQVLRAN
KLSDESLQRSVLQIARVMRGAHELSAMHVDKVTKWLAAQSNKAEKKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase