Gvermi4369.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4369.t1
Unique NameGvermi4369.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length271
Homology
BLAST of Gvermi4369.t1 vs. uniprot
Match: A0A2V3IIS7_9FLOR (Endonuclease V n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIS7_9FLOR)

HSP 1 Score: 357 bits (915), Expect = 1.260e-121
Identity = 168/252 (66.67%), Postives = 207/252 (82.14%), Query Frame = 0
Query:   11 LLYSWIAAEEEIAKNVDCSDDNNSWGHFFSPDGFKADRDLFVAGADVSFSTTEDLAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPTFLGFREGPVISALLKQLPQHIRGSIDCLIVDGNGLLHPRKAGLACHVGVNEHIPCIGVSKSLLYVDGLEESVLREQAATSGSKGVDVIGKSGFLWGKAILTGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLRGENNDLLKEEDF 262
            ++ SW   +E++A NVD +D NN W HFF P GF+ADRDLFVAG D+SFSTTEDL+IGT+ IVKL  ++  +LVYS S EVS+  PY+P+FLGFRE P+IS L+K LP  +R S+DCL+VDGNG+LHPRKAGLAC VG+ E IPC+GVSK+LL VDGL E   RE  A+S S  +DVIG+SGFLWGKAI+TGNA+SKPI+VSVGHRVSL TSARLV ALC++R+PSP+R+AD+HSRA+LRGE NDL  EE+F
Sbjct:   18 IVSSWTRMQEDLASNVDYTD-NNDWSHFFKPTGFQADRDLFVAGVDISFSTTEDLSIGTIAIVKLRRDSRQQLVYSHSREVSVQYPYVPSFLGFREAPIISTLMKHLPLRVRCSLDCLLVDGNGVLHPRKAGLACQVGIGESIPCVGVSKNLLCVDGLNEKTFREYIASSHSNEIDVIGRSGFLWGKAIMTGNAKSKPIFVSVGHRVSLITSARLVTALCEFRIPSPIRFADMHSRAYLRGECNDLFMEEEF 268          
BLAST of Gvermi4369.t1 vs. uniprot
Match: R7QG07_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG07_CHOCR)

HSP 1 Score: 303 bits (777), Expect = 9.320e-101
Identity = 155/258 (60.08%), Postives = 193/258 (74.81%), Query Frame = 0
Query:    6 QNKVSLLYSWIAAEEEIAKNVDCSDDNNSWGHFFSPDGFKADRDLFVAGADVSFST-TEDLAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPTFLGFREGPVISALLKQLPQHIRGSIDCLIVDGNGLLHPRKAGLACHVGVNEHIPCIGVSKSLLYVDGLEESVLREQAATSGSKGVDVIGKSGFLWGKAILTGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLRGENNDLLKEEDF 262
            QN+  L   W+A + +IA+ V   +D N +  FFS   F   RDLF+AGADVSFST   D AIGT T+V L  + + +LVYS+S  VSM  PYIPTFLGFRE PV+SA+L  LP  +R  IDC+++DGNGLLHPRKAGLACHVGV+E++P IGVSKSLL VDGL E  +RE AA  G++GV+VIG SG LWG+A+LTGNA+ KPIYVS+G+RVSL T++ LV  +C YR+P P+R ADLHSRA LRGE+  + KEE F
Sbjct:    5 QNESDLTKEWLARQGDIARRV-VKEDRNGFATFFSDTCFSPARDLFIAGADVSFSTRVPDHAIGTFTVVILRKSGSLDLVYSRSKTVSMPHPYIPTFLGFREAPVVSAMLAALPAIVRNRIDCVLLDGNGLLHPRKAGLACHVGVDENLPTIGVSKSLLCVDGLVEKEVRESAAAHGAEGVNVIGASGTLWGRALLTGNAKVKPIYVSIGNRVSLNTASYLVQKVCHYRIPEPIRMADLHSRALLRGEDEFIYKEEAF 261          
BLAST of Gvermi4369.t1 vs. uniprot
Match: UPI00053C95D5 (endonuclease V n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C95D5)

HSP 1 Score: 174 bits (442), Expect = 5.990e-50
Identity = 100/258 (38.76%), Postives = 147/258 (56.98%), Query Frame = 0
Query:   10 SLLYSWIAAEEEIAKNVDCSDDNNSWGHFFSP--DGFKADRDLFVAGADVSFSTTEDLAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPTFLGFREGPVISALLKQLPQHIRGSI-DCLIVDGNGLLHPRKAGLACHVGVNEHIPCIGVSKSLLYVDGLEESVLREQAATSGSKG---VDVIGKSGFLWGKAILTGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLRGENNDLLKEED 261
            S L SWI  ++ + K +   DD        SP  D   +D+  ++ G D+SFS  +        +V   P+    +VY     + +  PY+P FL FRE PV+  LL ++ +         LIVDGNG+LHPR  GLACH+GV  H+P IGV K+L +VDGL++S +R+      ++    ++++G SGF WG  I    +  KPIYVSVGHR+SL T+ ++V+  C YRVP P+R AD+ SR +L+     +L+E D
Sbjct:   14 SQLESWIEEQDRLKKKLIMYDDFPWKISSSSPSMDHSDSDKLKYIGGVDMSFSKEDSSVACACLVVLELPSL--RVVYHDFSLLHLRVPYVPGFLAFREAPVLLQLLDKMQKEQNPFYPQVLIVDGNGILHPRGFGLACHLGVLAHLPTIGVGKNLHHVDGLKQSEVRQLLQLKENQDEQVINLVGNSGFTWGVGIRPTLSCLKPIYVSVGHRISLETAVKIVMMTCKYRVPEPIRQADMRSREYLQEHQMKVLEEHD 269          
BLAST of Gvermi4369.t1 vs. uniprot
Match: W1PXB4_AMBTC (Uncharacterized protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PXB4_AMBTC)

HSP 1 Score: 172 bits (436), Expect = 5.450e-49
Identity = 104/263 (39.54%), Postives = 148/263 (56.27%), Query Frame = 0
Query:   15 WIAAEEEIAKNVDCSDDNNSWGHFFSPDGFK----ADRDLFVAGADVSFSTTE-DLAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPTFLGFREGPVISALLKQLPQHIRGSI-DCLIVDGNGLLHPRKAGLACHVGVNEHIPCIGVSKSLLYVDGLEESVLREQAATSGSKGVDVI---GKSGFLWGKAILTGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLRGENNDLLKEEDFASSIRP 268
            W+  +  + + V   +DN  W    S    K    + R  F+ G D+SF   +  +A G + IV +   A+ E+VY       +  PY+P FL FREGPV+  LL+++  H +      L+VDGNGLLHPR  GLA H+GV   +P IGV K+L +VDGL +S +++    +     DVI   G SGF WG A+ +     KPI++S+GHR+SL T+ ++V   C YR+P P+R AD+ SRA+L   N   LK    ASS RP
Sbjct:   19 WVEVQNLLKRKV-ILEDNFMWSISASESSLKGTSESHRLRFIGGVDISFCKDDPSIACGAIVIVDI---ASMEVVYDDYNLTQLQIPYVPGFLAFREGPVLLELLEKMKLHTKLYYPQLLMVDGNGLLHPRGFGLASHLGVMADLPTIGVGKNLHHVDGLTQSGVKKLLEGNTKSDGDVITLTGNSGFTWGVAMRSSEDSIKPIFISIGHRISLETATKVVKMCCKYRIPEPIRQADIRSRAYLL-RNARSLKIAYEASSSRP 276          
BLAST of Gvermi4369.t1 vs. uniprot
Match: A0A6I9RLC4_ELAGV (endonuclease V isoform X1 n=6 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RLC4_ELAGV)

HSP 1 Score: 169 bits (428), Expect = 6.320e-48
Identity = 96/244 (39.34%), Postives = 151/244 (61.89%), Query Frame = 0
Query:   15 WIAAEEEIAKNVDCSDDNNSW---GHFFSP-DGFKADRDLFVAGADVSFSTTEDLAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPTFLGFREGPVISALLKQLPQHIRGSI-DCLIVDGNGLLHPRKAGLACHVGVNEHIPCIGVSKSLLYVDGLEESVLRE--QAATSGSKG-VDVIGKSGFLWGKAILTGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLR 250
            WI A++ + + +  ++D+ +W    H  SP +G K+++  ++ G D+SF   ED +I    +V L  +  + +V+ +     +  PY+P FL FRE PV+  LL +L   +       L+VDGNGLLHPR  GLACH+G+  ++P IG+ K+L +VDGL +S +R+  +A  +  K  V +IGKSG +WG A+ +    SKPIY+S GHR+SL ++ R+V   C +RVP P+R AD+ S+ FL+
Sbjct:   20 WIEAQDLLKRKM-IAEDDFTWTIPSHGSSPQEGSKSEKLKYIGGVDISF-LKEDPSIACAALVILDADTLN-VVHEEFDVTKLQIPYVPGFLAFREAPVLLGLLDKLKHGVHPFYPQLLMVDGNGLLHPRGFGLACHLGILANLPTIGIGKNLHHVDGLTQSSVRQCLEARENRDKDLVPLIGKSGNIWGVAMRSSPGSSKPIYISTGHRISLNSAIRIVKLCCKFRVPEPIRQADIRSKVFLQ 260          
BLAST of Gvermi4369.t1 vs. uniprot
Match: A0A078GDY2_BRANA (BnaA08g12640D protein n=8 Tax=Brassica TaxID=3705 RepID=A0A078GDY2_BRANA)

HSP 1 Score: 169 bits (427), Expect = 9.970e-48
Identity = 97/263 (36.88%), Postives = 147/263 (55.89%), Query Frame = 0
Query:    2 SSDSQNKVSLLYSWIAAEEEIAKNVDCSDDNNSWGHFFSPDGFKADRDL-FVAGADVSFSTTEDLAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPTFLGFREGPVISALLKQL-PQHIRGSIDCLIVDGNGLLHPRKAGLACHVGVNEHIPCIGVSKSLLYVDGLEESVLRE---QAATSGSKGVDVIGKSGFLWGKAILTGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLRGENNDLLKE 259
            +S   +  + L +W   ++ + K +   DD   W    S +  +    L +V G D+SFS  +        +V   P+    +V+++   + +  PY+P FL FRE PV+  +L+++   H       L+VDGNG+LHPR  GLACH+GV  H+P IGV K+L +VDGL++S +R+          + + ++GKSGF WG       +  KPIYVSVGHR+SL T+  +V   C YRVP P+R AD+ SRA+L+     LLK+
Sbjct:    6 ASGESSSSNQLENWTEEQDRLKKKLITHDDF-PWKLPSSTEHPQRSETLKYVGGVDISFSKDDSSVACACLVVLELPSL--RVVHNELSLIRLQVPYVPGFLAFREAPVLLQILEKMRDDHHPFYPQVLMVDGNGILHPRGFGLACHLGVLAHLPTIGVGKNLHHVDGLDQSEVRQLFQHKENENEQVIKLVGKSGFTWGVGFRPTLSTLKPIYVSVGHRISLDTAVEVVKMTCMYRVPEPIRQADIRSRAYLQKHQLRLLKD 265          
BLAST of Gvermi4369.t1 vs. uniprot
Match: A0A2G2YAD6_CAPAN (Uncharacterized protein n=5 Tax=Solanoideae TaxID=424551 RepID=A0A2G2YAD6_CAPAN)

HSP 1 Score: 169 bits (427), Expect = 1.350e-47
Identity = 91/204 (44.61%), Postives = 127/204 (62.25%), Query Frame = 0
Query:   51 FVAGADVSFSTTED-LAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPTFLGFREGPVISALLKQLPQHIRGSI-DCLIVDGNGLLHPRKAGLACHVGVNEHIPCIGVSKSLLYVDGLEESVLRE--QAATSGSKGVDVIGKSGFLWGKAILTGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLR 250
            +V G D+SFS  +  +A GTL ++ L     H++VY  S    +  PY+P FL FRE PV+  LL ++  +        L+VDGNGLLHPR  GLACH+GV   +P +GV K+L +VDGL +S +RE  Q+A S    + +IG SG  WG A+ +     KPI++SVGHR+SL T+  +V  +C +RVP P+R AD+ SR  LR
Sbjct:   82 YVGGVDLSFSKDDSSIACGTLVVLDL---QTHKVVYEDSSIARLHIPYVPGFLAFREAPVLLELLDKMKNNAHPFYPQLLMVDGNGLLHPRGFGLACHIGVLADLPTVGVGKNLHHVDGLTQSRVRELLQSADSPENILPLIGDSGCTWGAAMRSSQGSLKPIFISVGHRISLATAIEIVRMVCRFRVPEPIRQADIRSRECLR 282          
BLAST of Gvermi4369.t1 vs. uniprot
Match: A0A3Q7JYL4_SOLLC (Uncharacterized protein n=7 Tax=Solanum TaxID=4107 RepID=A0A3Q7JYL4_SOLLC)

HSP 1 Score: 167 bits (423), Expect = 2.990e-47
Identity = 91/204 (44.61%), Postives = 127/204 (62.25%), Query Frame = 0
Query:   51 FVAGADVSFSTTED-LAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPTFLGFREGPVISALLKQLPQHIRGSI-DCLIVDGNGLLHPRKAGLACHVGVNEHIPCIGVSKSLLYVDGLEESVLRE--QAATSGSKGVDVIGKSGFLWGKAILTGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLR 250
            +V G D+SFS  +  +A GTL ++ L      ++VY  S  V +  PY+P FL FRE PV+  LL ++  +        L+VDGNGLLHPR  GLACH+GV   +P +GV K+L +VDGL +S +RE  QAA S    + +IG SG +WG A+ +     KPI++SVGHR+SL ++  +V   C +RVP P+R AD+ SR  LR
Sbjct:   61 YVGGVDLSFSKDDSSIACGTLVVLDL---TTQKVVYEDSSIVRLHIPYLPGFLAFREAPVLLELLDKMKNNAHCFYPQLLMVDGNGLLHPRGFGLACHIGVLADLPTVGVGKNLHHVDGLTQSTVRELLQAADSPEHILPLIGDSGCIWGAAMRSSEGSLKPIFISVGHRISLASAIAIVRMTCKFRVPEPIRQADIRSRERLR 261          
BLAST of Gvermi4369.t1 vs. uniprot
Match: UPI001C530224 (endonuclease V n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C530224)

HSP 1 Score: 168 bits (426), Expect = 3.000e-47
Identity = 99/258 (38.37%), Postives = 149/258 (57.75%), Query Frame = 0
Query:    2 SSDSQNKVSLLYSWIAAEEEIAKNVDCSDDNNSWGHFFSPDGFK----ADRDLFVAGADVSFSTTE-DLAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPTFLGFREGPVISALLKQLPQHIRGSI-DCLIVDGNGLLHPRKAGLACHVGVNEHIPCIGVSKSLLYVDGLEESVLREQAATSGSKGVDVI---GKSGFLWGKAILTGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLR 250
            S+   +  S+  SWI A+E + + +   +DN +W      +G K     ++  +V G D+SFS  +  +A G L +V L      +++Y     V +  PYIP FL FRE PV+  LL+++ Q+        L+VDGNG+LHPR  GLACH+GV   +P IG+ K+L +VDGL +S +RE    + S   D+I   G S + WG A+ +     KPI++S GHRVS+ T+ ++V   C YRVP P+R AD+ SR +L+
Sbjct:   16 STSEASLSSINNSWIEAQESLKRQL-IVEDNFTWRLPSHDNGLKDNDKGEKLRYVGGVDLSFSKDDPSIACGALVVVDL---EILKVIYDDFSIVRLQIPYIPGFLAFREAPVLLELLEKMKQNAHLIYPQLLMVDGNGILHPRGFGLACHLGVMAKLPTIGIGKNLHHVDGLTQSGVRELLEANESCARDLIPLTGNSNYTWGVAMRSTEGSLKPIFISSGHRVSIDTAVKIVKMTCKYRVPEPIRQADIRSRDYLQ 269          
BLAST of Gvermi4369.t1 vs. uniprot
Match: A0A8J5FB69_ZINOF (Uncharacterized protein n=6 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FB69_ZINOF)

HSP 1 Score: 168 bits (425), Expect = 4.350e-47
Identity = 95/247 (38.46%), Postives = 147/247 (59.51%), Query Frame = 0
Query:   13 YSWIAAEEEIAKNVDCSDDNNSWG----HFFSPDGFKADRDLFVAGADVSFSTTE-DLAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPTFLGFREGPVISALLKQLPQHIRGSI-DCLIVDGNGLLHPRKAGLACHVGVNEHIPCIGVSKSLLYVDGLEESVLREQAATSGSKGVDVI---GKSGFLWGKAILTGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLR 250
            +S + A+E + + +   DD  SWG       S DG   ++  ++ G D+SF   +  LA G L ++    +    +V+ +     +  PY+P FL FRE P++  LL ++  +        L+VDGNGLLHPR  GLACH+G+  ++P IG+ K+L +VDGL +S +R     SG+   D+I   GKSG  WG A+ + ++ SKPIYVS+GHR+SL ++  +V + C YR+P P+R AD+ S+AFL+
Sbjct:   43 FSLLRAQESLKERLVLEDDF-SWGISSQESPSEDGSAREKLKYIGGVDISFLKKDPSLACGALVVLD---SDTLNVVHEEFDVARLHVPYVPGFLAFREAPILLGLLDKMKFNAHPFYPQLLMVDGNGLLHPRGLGLACHLGILANLPTIGIGKNLHHVDGLTQSKVRRCFEASGTYDEDLIPLIGKSGKTWGMAMHSSHSSSKPIYVSIGHRISLGSAIMIVKSSCKYRIPEPIRQADIRSKAFLQ 285          
The following BLAST results are available for this feature:
BLAST of Gvermi4369.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIS7_9FLOR1.260e-12166.67Endonuclease V n=1 Tax=Gracilariopsis chorda TaxID... [more]
R7QG07_CHOCR9.320e-10160.08Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI00053C95D55.990e-5038.76endonuclease V n=1 Tax=Tarenaya hassleriana TaxID=... [more]
W1PXB4_AMBTC5.450e-4939.54Uncharacterized protein n=3 Tax=Amborella trichopo... [more]
A0A6I9RLC4_ELAGV6.320e-4839.34endonuclease V isoform X1 n=6 Tax=Arecaceae TaxID=... [more]
A0A078GDY2_BRANA9.970e-4836.88BnaA08g12640D protein n=8 Tax=Brassica TaxID=3705 ... [more]
A0A2G2YAD6_CAPAN1.350e-4744.61Uncharacterized protein n=5 Tax=Solanoideae TaxID=... [more]
A0A3Q7JYL4_SOLLC2.990e-4744.61Uncharacterized protein n=7 Tax=Solanum TaxID=4107... [more]
UPI001C5302243.000e-4738.37endonuclease V n=1 Tax=Macadamia integrifolia TaxI... [more]
A0A8J5FB69_ZINOF4.350e-4738.46Uncharacterized protein n=6 Tax=Zingiber officinal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2170.10archaeoglobus fulgidus dsm 4304 superfamilycoord: 2..251
e-value: 3.4E-68
score: 231.8
NoneNo IPR availablePANTHERPTHR28511:SF1ENDONUCLEASE Vcoord: 4..254
IPR007581Endonuclease VPFAMPF04493Endonuclease_5coord: 51..243
e-value: 1.4E-48
score: 165.2
IPR007581Endonuclease VPANTHERPTHR28511ENDONUCLEASE Vcoord: 4..254
IPR007581Endonuclease VCDDcd06559Endonuclease_Vcoord: 12..247
e-value: 2.99258E-65
score: 200.804

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1379539..1380351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4369.t1Gvermi4369.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1379539..1380351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4369.t1 ID=Gvermi4369.t1|Name=Gvermi4369.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=271bp
MSSDSQNKVSLLYSWIAAEEEIAKNVDCSDDNNSWGHFFSPDGFKADRDL
FVAGADVSFSTTEDLAIGTLTIVKLFPNAAHELVYSKSCEVSMAQPYIPT
FLGFREGPVISALLKQLPQHIRGSIDCLIVDGNGLLHPRKAGLACHVGVN
EHIPCIGVSKSLLYVDGLEESVLREQAATSGSKGVDVIGKSGFLWGKAIL
TGNAQSKPIYVSVGHRVSLPTSARLVVALCDYRVPSPVRYADLHSRAFLR
GENNDLLKEEDFASSIRPNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007581Endonuclease-V