Gvermi4361.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4361.t2
Unique NameGvermi4361.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length397
Homology
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BLAST of Gvermi4361.t2 vs. uniprot
Match: A0A2V3ILY2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY2_9FLOR)

HSP 1 Score: 324 bits (830), Expect = 1.670e-103
Identity = 164/349 (46.99%), Postives = 235/349 (67.34%), Query Frame = 0 
Query:    3 PIGSLLLSLTDLCMAADEKLLMHVEGLPPSKNIAELSVGWITPKIEKVLLNVQICVNKKNGWPFSKARIYFILYTWEKKGHTVWNPIYRSEILTNLSNDPCSRKPMKYIGAMIRMDGSKVDENQKRSFRIEFLHYKATRQAHKILGSSVFSLQQLRQTVVPNGPLFLKLSNIPESDLVGGLRLLEATLEHGESSFRLEASFGGEIAEDVIYVDVEVLNTTSAPLRRVSFEISAYMDQGAWAKFYGSEMSPNLAAGECHTFSVAKLSEKKLLAGATRRWISIAFSQGEGSQQLHLGAANTTLSDL---SSGQVLPLEN-EEGLLRVRTMERVTNGSSRVHLALCYEYGAK 347
            P G LL +L  + MA  E++ M V GLP S++ AELS+ WITP +EK+++NVQI +NKK GWPFS AR YF++Y W K  +++WNPIYRSE++T  S  PCS++ MK+IGAMI+MDG  VD+NQ  +FRIEF HYK T    KILGS  F L+QLRQ    N  L +++SN  E  LVG LRL+++ LE+G+S+F  +  FGG++ +D +Y+D+EVLN++ + + RVSFE+S Y  QGAW  F+ SE S  L +GE + F VAK  E+KL+       + I +  G+   +   G+    + D+   SSG +LPL+  E+GL+R+  +E+ T   +++HL LC+ YGA+
Sbjct:  108 PKGQLLSNLHAIAMATHERMQMSVAGLPRSRDTAELSLKWITPDVEKLIINVQIHINKKEGWPFSNARPYFVVYCW-KSNYSLWNPIYRSEVMTKRSIPPCSKRAMKFIGAMIKMDGKSVDKNQASAFRIEFFHYKTT-GIDKILGSYPFDLRQLRQLEPGNQRLNMRVSNFEEGHLVGDLRLIDSKLEYGKSTFTFDVEFGGDVGKDFVYLDLEVLNSSPSSIGRVSFEVSTYTPQGAWETFFSSERSHRLKSGESYRFDVAKFLERKLMNNRNCCPLGIKWYIGKEPGRRMCGSILIMIPDVLEKSSGDMLPLQECEKGLIRIENLEKTTENGTKIHLGLCFVYGAQ 454
The following BLAST results are available for this feature:
BLAST of Gvermi4361.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILY2_9FLOR1.670e-10346.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..396
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..396
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1362641..1363831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4361.t2Gvermi4361.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1362641..1363831 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4361.t2 ID=Gvermi4361.t2|Name=Gvermi4361.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=397bp
MYPIGSLLLSLTDLCMAADEKLLMHVEGLPPSKNIAELSVGWITPKIEKV
LLNVQICVNKKNGWPFSKARIYFILYTWEKKGHTVWNPIYRSEILTNLSN
DPCSRKPMKYIGAMIRMDGSKVDENQKRSFRIEFLHYKATRQAHKILGSS
VFSLQQLRQTVVPNGPLFLKLSNIPESDLVGGLRLLEATLEHGESSFRLE
ASFGGEIAEDVIYVDVEVLNTTSAPLRRVSFEISAYMDQGAWAKFYGSEM
SPNLAAGECHTFSVAKLSEKKLLAGATRRWISIAFSQGEGSQQLHLGAAN
TTLSDLSSGQVLPLENEEGLLRVRTMERVTNGSSRVHLALCYEYGAKAPV
GQENAINDTVRVQPAARDKNAMPAARRPTNFNYSPSVDSPRDSNSS*
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