Gvermi4327.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4327.t2
Unique NameGvermi4327.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length196
Homology
BLAST of Gvermi4327.t2 vs. uniprot
Match: A0A2V3IVE4_9FLOR (Uma2 domain-containing protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVE4_9FLOR)

HSP 1 Score: 360 bits (923), Expect = 1.200e-124
Identity = 175/195 (89.74%), Postives = 184/195 (94.36%), Query Frame = 0
Query:    1 MPRVMCLHSAAASHNPRGLTVEEYHELIETGFLDHARGELIDGFFIQMHPQSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLLKQGVSDHPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRTVRILRNPQGHRFMYDEVFYKGRITLAAFPKKEMDIGDIFVGLPVS 195
            MPRVMCLHSAA+S+ PRGLTVEEYHELIETGFLDHARGELIDGFFIQMHPQSPRHSKVV+NLNRLL + F DVADIGPGTPISLSDG SEPEPD+TL KQGV DHPEPRDIFVVMEVSNSSLDFD TTKL KYA SGIPEYWLIDVNKRTVRILRNPQG+RFMYDEVF+KGRITLAAFPKK+MDIGDIF+GLP S
Sbjct:   41 MPRVMCLHSAASSNIPRGLTVEEYHELIETGFLDHARGELIDGFFIQMHPQSPRHSKVVKNLNRLLVNNFSDVADIGPGTPISLSDGNSEPEPDMTLSKQGVYDHPEPRDIFVVMEVSNSSLDFDSTTKLIKYATSGIPEYWLIDVNKRTVRILRNPQGNRFMYDEVFFKGRITLAAFPKKKMDIGDIFLGLPAS 235          
BLAST of Gvermi4327.t2 vs. uniprot
Match: A0A2V3ISP6_9FLOR (Uma2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISP6_9FLOR)

HSP 1 Score: 313 bits (801), Expect = 1.730e-105
Identity = 153/178 (85.96%), Postives = 163/178 (91.57%), Query Frame = 0
Query:   18 GLTVEEYHELIETGFLDHARGELIDGFFIQMHPQSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLLKQGVSDHPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRTVRILRNPQGHRFMYDEVFYKGRITLAAFPKKEMDIGDIFVGLPVS 195
            GLTV+ YHELIETGFLDHARGELIDGFFI M PQSPRHSKVV+NL RLLAS F DVA+IGP TPISLSDGKSEPEPDITL KQGV DHP PRDIFVV+EVSNSSLDFD TTKLTKYA SGIPEYW IDVNKRTVRILRNPQG+RFMYDEVF++GRITLAAFPKKE++ GDIF+GLP S
Sbjct:   97 GLTVDAYHELIETGFLDHARGELIDGFFIPMRPQSPRHSKVVKNLIRLLASNFLDVAEIGPATPISLSDGKSEPEPDITLSKQGVYDHPGPRDIFVVVEVSNSSLDFDSTTKLTKYATSGIPEYWRIDVNKRTVRILRNPQGNRFMYDEVFFEGRITLAAFPKKEIEFGDIFLGLPAS 274          
BLAST of Gvermi4327.t2 vs. uniprot
Match: A0A2V3J7S8_9FLOR (Uma2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7S8_9FLOR)

HSP 1 Score: 162 bits (409), Expect = 4.050e-46
Identity = 88/181 (48.62%), Postives = 112/181 (61.88%), Query Frame = 0
Query:   14 HNPRGLTVEEYHELIETGFLDHARGELIDGFFIQMHPQSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLLKQGVSD-----HPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRTVRILRNPQGHRFMYDEVFYKGRITLAAFPKKEMDIGDIF 189
            H   GLTV+EYHELIE+GFLDH RGELIDGFFIQMHPQ   H   +  L R L     + A I    PI+L   KSEPEPDI ++  GV D     +P P D+ +V +VSNS+L  D T KL +YA +GIPEYW++D+  R V++LR PQG+ +        G I  AAFP   + +  +F
Sbjct:   93 HKCEGLTVDEYHELIESGFLDHVRGELIDGFFIQMHPQCVEHVATLSFLFRTLFKDLENRAVIRDSKPITLMKLKSEPEPDI-VIASGVDDDYNTRNPSPSDVLLVAKVSNSTLKKDSTIKLEEYALTGIPEYWIVDIKARNVQVLRKPQGNCYESKVTVSSGFIAPAAFPDVSIRVQTLF 272          
BLAST of Gvermi4327.t2 vs. uniprot
Match: A0A166UP07_9CYAN (Uma2 domain-containing protein n=1 Tax=Leptolyngbya valderiana BDU 20041 TaxID=322866 RepID=A0A166UP07_9CYAN)

HSP 1 Score: 127 bits (320), Expect = 8.210e-34
Identity = 70/178 (39.33%), Postives = 104/178 (58.43%), Query Frame = 0
Query:   16 PRGLTVEEYHELIETGFLDHARGELIDGFFIQMHPQSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLL----KQGVSDHPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRTVRILRNPQGHRFMYDEVFYKGRITLAAFPKKEMDIGDIF 189
            P   ++E+YH+++ TG L H   ELIDG  ++M P+S  H+    +L   L+ T  D A + P  PI+LS  +SEPEPDI ++       +  HP   DIF+++EVS S+L FDRT K   YAA  I EYW++++N R + + R P    +   +VF +G I   AFP  E+D+  +F
Sbjct:    9 PLRWSIEDYHQIVNTGILAHRCVELIDGEILEMAPESADHTYTWGSLVTRLSQTIGDRALVRPPAPITLS--QSEPEPDIAIVAGTWNTYIDRHPSADDIFLLIEVSRSTLHFDRTIKAPLYAAERIAEYWIVNLNDRQLEVYRQPSLTEYRDRQVFSRGAIAPLAFPDCEIDVRSLF 184          
BLAST of Gvermi4327.t2 vs. uniprot
Match: A0A8J2XHW2_9CHRO (Uncharacterized protein n=1 Tax=Chroococcus sp. FPU101 TaxID=1974212 RepID=A0A8J2XHW2_9CHRO)

HSP 1 Score: 126 bits (316), Expect = 3.010e-33
Identity = 67/170 (39.41%), Postives = 101/170 (59.41%), Query Frame = 0
Query:   20 TVEEYHELIETGFLDHARGELIDGFFIQMHPQSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLLK----QGVSDHPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRTVRILRNPQGHRFMYDEVFYKGRITLAAFPKKEMDI 185
            TVE+YH LI+TGFL+  + ELI G  I+M P+ P H+ V     + L +   ++A +    PI+L+D  SEP+PD+ + K    Q  + HP+P +IF ++E+S S+LD+D + K   YA +GI EYW++DV    V + R P G  +    +  KG IT  AFP  ++ I
Sbjct:    8 TVEDYHRLIDTGFLNRRKVELIAGEIIEMPPEGPLHAFVTEGFAKYLQALLQELALVREAHPITLAD--SEPQPDLAICKLPRQQYKTRHPQPSEIFWLIEISQSTLDYDLSEKKQAYARAGIQEYWVVDVKGAQVYVFRQPLGDDYQASSIISKGGITPLAFPNIQVSI 175          
BLAST of Gvermi4327.t2 vs. uniprot
Match: A0A2T1LTS1_9CHRO (Uma2 domain-containing protein n=1 Tax=Aphanothece hegewaldii CCALA 016 TaxID=2107694 RepID=A0A2T1LTS1_9CHRO)

HSP 1 Score: 124 bits (311), Expect = 1.610e-32
Identity = 67/170 (39.41%), Postives = 101/170 (59.41%), Query Frame = 0
Query:   20 TVEEYHELIETGFLDHARGELIDGFFIQMHPQSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLLK----QGVSDHPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRTVRILRNPQGHRFMYDEVFYKGRITLAAFPKKEMDI 185
            TVE+YH LI++GFLD  R ELI G  I+M P+ P H+ V     + L +   ++A +    PI+L+D  SEPEPD+ + K    Q  + HP+  +IF ++E+S S+L++D + K   YA +GI EYW++DVNK  V + R P G  +    +  K  IT  AFP  ++ +
Sbjct:    8 TVEDYHRLIDSGFLDQRRVELIAGEIIEMSPERPFHAFVTEGFAKYLQALLQELALVREAHPITLAD--SEPEPDLAICKLPRQQYKTRHPQASEIFWLIEISQSTLNYDLSEKKQAYARAGIQEYWVVDVNKSQVYVFRQPFGDDYQASSIISKDYITPFAFPNIKVSV 175          
BLAST of Gvermi4327.t2 vs. uniprot
Match: A0A0N0ZNE3_THESC (Uma2 domain-containing protein n=3 Tax=Thermus TaxID=270 RepID=A0A0N0ZNE3_THESC)

HSP 1 Score: 122 bits (306), Expect = 9.840e-32
Identity = 72/181 (39.78%), Postives = 106/181 (58.56%), Query Frame = 0
Query:   16 PRGLTVEEYHELIETGFL-DHARGELIDGFFIQMHPQSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLLKQG----VSDHPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRTVRILRNPQGHRFMYDEVFYKG---RITLAAFPKKEMDIGDI 188
            PR  T EEYH L+E G + +  R ELI+G  ++M P   +H+ VV+ LN L   T  D A +G   PI LS   SEP+PD+ LL+        DHP P DIF+++EV+ +SL +DR  KL  YA + IPE WL+++ +R V + RNP G   +Y E+   G    ++  AFP+  + + ++
Sbjct:    4 PRRFTREEYHRLLEAGVIQEDERVELIEGTVVEMSPIGGQHAAVVKRLNALFHQTLADQALVGVQDPIRLSP-LSEPQPDLVLLRPRPDFYAQDHPGPEDIFLLVEVAEASLSYDRQVKLPLYAQARIPEVWLVNLGERRVEVYRNPLGG--VYQEMRELGPEDTLSPMAFPQVSLKVREL 181          
BLAST of Gvermi4327.t2 vs. uniprot
Match: UPI001C014E32 (Uma2 family endonuclease n=1 Tax=Leptothoe spongobia TaxID=2651728 RepID=UPI001C014E32)

HSP 1 Score: 122 bits (306), Expect = 1.070e-31
Identity = 71/176 (40.34%), Postives = 102/176 (57.95%), Query Frame = 0
Query:   20 TVEEYHELIETGFL-DHARGELIDGFFIQMHPQSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLLKQGV----SDHPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRTVRILRNPQGHRFMYDEVFYKG-RITLAAFPKKEMDIGDIF 189
            TV +YH++IE+G L D    ELI G  I+M P   RH+  V  LN LL    F  A I   +PI LSD  SEP+PDI++L++      + HP P DIFV++EVS+S++DFDR  K+  YA   IPE WL+D+N   +     P    +   ++F  G R+   AFP+  +++  +F
Sbjct:   11 TVGQYHQMIESGILTDRDHVELIQGEIIEMSPVGRRHAACVDRLNELLVLKLFRKALIRVQSPILLSDN-SEPQPDISILQRREDFYNAGHPTPADIFVLVEVSDSTIDFDRNVKVPIYAQEQIPEIWLVDLNDTQIERYCQPMNKTYQQLQIFNLGERLNFQAFPEISIEVNQVF 185          
BLAST of Gvermi4327.t2 vs. uniprot
Match: A0A7C9Q0B7_9CYAN (Uma2 family endonuclease n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9Q0B7_9CYAN)

HSP 1 Score: 122 bits (305), Expect = 1.280e-31
Identity = 66/164 (40.24%), Postives = 94/164 (57.32%), Query Frame = 0
Query:   20 TVEEYHELIETGFLDHARGELIDGFFIQMHPQSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLLKQGVSD----HPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRTVRILRNPQGHRFMYDEVFYKGRITLAAFP 179
            TVE+YH L+E G L   R EL+ G  +QM P+ P HS + R L   L     D A +    PI+LSD  SEPEPD+ +++   S     HP   DIF ++E++NS+L++D   K   YA + IPEYW++DV  + V I R P+G  + ++    +G I   AFP
Sbjct:    8 TVEDYHRLVEAGLLADRRVELLQGEIVQMAPEGPFHSFMTRGLAGYLRRQLADRAMVSEAHPITLSD--SEPEPDLAIVQLPESQYRDRHPYAEDIFWLVEIANSTLEYDLNDKRKIYARARIPEYWVVDVKGKRVLIFRGPKGEDYQFNTALSEGNIAPLAFP 169          
BLAST of Gvermi4327.t2 vs. uniprot
Match: UPI001688AFBA (Uma2 family endonuclease n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001688AFBA)

HSP 1 Score: 122 bits (305), Expect = 1.510e-31
Identity = 69/179 (38.55%), Postives = 108/179 (60.34%), Query Frame = 0
Query:   17 RGLTVEEYHELIETGFL-DHARGELIDGFFIQMHPQSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLLKQGVSD-----HPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRTVRILRNPQGHRFMYDEVFYKG-RITLAAFPKKEMDIGDI 188
            R  TVEEYH + E G L +  R ELIDG  + + P SPRH+  V+   RL +    D + +    P+ LS+ +SEP+PDI LL Q  SD     HP+P+DIF+++EV++++++ DR  K+  YA SGI E WL+D+N++ + I R P    +   +   +G RI   AFP+ ++ + ++
Sbjct:    8 RQFTVEEYHRMAEAGILTEDERVELIDGMIVHILPISPRHAACVKRFIRLFSQRLGDNSIVSVHNPVELSN-QSEPQPDIALL-QPRSDFYEAGHPQPKDIFLIVEVADTTVESDRQVKIPLYAGSGISEVWLVDINEQLIEIYRQPTAAGYQDIQKCRRGQRIAPQAFPEIQLAVDEV 184          
The following BLAST results are available for this feature:
BLAST of Gvermi4327.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVE4_9FLOR1.200e-12489.74Uma2 domain-containing protein n=4 Tax=Gracilariop... [more]
A0A2V3ISP6_9FLOR1.730e-10585.96Uma2 domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3J7S8_9FLOR4.050e-4648.62Uma2 domain-containing protein n=1 Tax=Gracilariop... [more]
A0A166UP07_9CYAN8.210e-3439.33Uma2 domain-containing protein n=1 Tax=Leptolyngby... [more]
A0A8J2XHW2_9CHRO3.010e-3339.41Uncharacterized protein n=1 Tax=Chroococcus sp. FP... [more]
A0A2T1LTS1_9CHRO1.610e-3239.41Uma2 domain-containing protein n=1 Tax=Aphanothece... [more]
A0A0N0ZNE3_THESC9.840e-3239.78Uma2 domain-containing protein n=3 Tax=Thermus Tax... [more]
UPI001C014E321.070e-3140.34Uma2 family endonuclease n=1 Tax=Leptothoe spongob... [more]
A0A7C9Q0B7_9CYAN1.280e-3140.24Uma2 family endonuclease n=1 Tax=Oscillatoria sp. ... [more]
UPI001688AFBA1.510e-3138.55Uma2 family endonuclease n=2 Tax=unclassified Micr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008538Putative restriction endonucleasePFAMPF05685Uma2coord: 21..169
e-value: 4.2E-27
score: 94.8
IPR008538Putative restriction endonucleaseCDDcd06260DUF820coord: 37..179
e-value: 3.97716E-30
score: 106.36
IPR012296Nuclease, putative, TT1808GENE3D3.90.1570.10tt1808, chain Acoord: 12..190
e-value: 6.9E-30
score: 105.6
NoneNo IPR availablePANTHERPTHR35400:SF1SLR1083 PROTEINcoord: 9..189
NoneNo IPR availablePANTHERPTHR35400SLR1083 PROTEINcoord: 9..189
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 16..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1248682..1249269 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4327.t2Gvermi4327.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1248682..1249269 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4327.t2 ID=Gvermi4327.t2|Name=Gvermi4327.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=196bp
MPRVMCLHSAAASHNPRGLTVEEYHELIETGFLDHARGELIDGFFIQMHP
QSPRHSKVVRNLNRLLASTFFDVADIGPGTPISLSDGKSEPEPDITLLKQ
GVSDHPEPRDIFVVMEVSNSSLDFDRTTKLTKYAASGIPEYWLIDVNKRT
VRILRNPQGHRFMYDEVFYKGRITLAAFPKKEMDIGDIFVGLPVS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008538Uma2
IPR012296Nuclease_put_TT1808
IPR011335Restrct_endonuc-II-like