Gvermi4315.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi4315.t1 vs. uniprot
Match: A0A2V3J3U8_9FLOR (DEAD-box ATP-dependent RNA helicase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3U8_9FLOR) HSP 1 Score: 201 bits (512), Expect = 3.450e-55 Identity = 115/185 (62.16%), Postives = 133/185 (71.89%), Query Frame = 0
Query: 101 MNSGHSEPNRIQFDLCSAEDDAERSKAGSKLPGEGRKSCLDPRLQTVLASQLGIHRIFPMQEALLSFILNQASIGRTGDVVLCAPTGSGKTLAYALPIIQDMLDRKIIRLRAIVVVPTRDLAAQVFSVFMALTEKFGISVLCIVGSSSTAEEARNVPKAEILIATPGRLVRHFRGMVYEAARDNK 285
M +G S+ RI FDL S+E + S SKL G KS LDPRL+ VL+SQLGI + MQE +L +IL+ +S RTGDVVLCAPTGSGKTLAYALPIIQDMLDR++ RLRAIVVVPTRDLA QVF+V LT+ FGI LC +GSS+ AEEA +P AEILIATPGRLV H Y D K
Sbjct: 1 MKAGMSDVKRILFDLGSSEGIPQNS-GPSKLTPAGTKSILDPRLRKVLSSQLGIQNVLHMQEVVLEYILSTSSRSRTGDVVLCAPTGSGKTLAYALPIIQDMLDRRMPRLRAIVVVPTRDLANQVFTVLSTLTKPFGIFTLCTIGSSAIAEEALAIPNAEILIATPGRLVDHINNGDYLKLSDVK 184
BLAST of Gvermi4315.t1 vs. uniprot
Match: R7QSB0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSB0_CHOCR) HSP 1 Score: 135 bits (341), Expect = 2.120e-31 Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 0
Query: 152 LGIHRIFPMQEALLSFILNQASIGRTGDVVLCAPTGSGKTLAYALPIIQDMLDRKIIRLRAIVVVPTRDLAAQVFSVFMALTEKFGISVLCIVGSSSTAEEARNVPKAEILIATPGRLVRH 272
+GI +FPMQEA+ S++ + ++ GDV+LCAPTGSGKTLAYALPI+Q ++ RK+ RLRAI+V+PTRDLA QV VF LT FGISV + G++S E ++ AEILIATPGRLV H
Sbjct: 1 MGITSLFPMQEAVFSYLQDASAKRIVGDVILCAPTGSGKTLAYALPIVQGIIGRKLPRLRAIIVLPTRDLATQVAGVFKELTGNFGISVALVSGATSIVVERASLKTAEILIATPGRLVDH 121
BLAST of Gvermi4315.t1 vs. uniprot
Match: A0A7S0ZIH6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIH6_9RHOD) HSP 1 Score: 105 bits (261), Expect = 7.600e-23 Identity = 65/147 (44.22%), Postives = 89/147 (60.54%), Query Frame = 0
Query: 140 LDPRLQTVLASQLGIHRIFPMQEALLSFILNQASIGRTGDVVLCAPTGSGKTLAYALPIIQDMLDRKIIR-LRAIVVVPTRDLAAQVFSVFMALTEKFGISVLCIVGSSSTAEEA-----RNVPK--------AEILIATPGRLVRH 272
+ R+ L +L I +F MQE ++S I+ GDV+L APTGSGKTLAYA+PI+ +L +R +RA+V++PTRDL QV +VF AL K + V+C+ G +S A EA R+ K AEI++ATPGRLV H
Sbjct: 52 ISSRILKNLRKKLKIKTLFSMQETVISRIIQMDKSALLGDVILSAPTGSGKTLAYAIPIVHHLLSVPSLRAVRALVILPTRDLTLQVEAVFEALLHKTPLKVMCLTGQTSFAMEASQLVVRDYSKDSEVYESVAEIIVATPGRLVEH 198
BLAST of Gvermi4315.t1 vs. uniprot
Match: A0A5J4YLL8_PORPP (ATP-dependent RNA helicase DDX51 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLL8_PORPP) HSP 1 Score: 110 bits (275), Expect = 1.350e-22 Identity = 65/156 (41.67%), Postives = 97/156 (62.18%), Query Frame = 0
Query: 140 LDPRLQTVLASQLGIHRIFPMQEALLSFILNQASIGRTGDVVLCAPTGSGKTLAYALPIIQDMLD---------RKIIRLRAIVVVPTRDLAAQVFSVFMALTEKFGISVLCIVGSSSTAEEARNVPKA------------EILIATPGRLVRHFR 274
LD R++ L + G+ +F MQ+ +++ +L ++ ++GDVVLCAPTGSGKTLAYALP++ ++ R+ LRA+V+VPTRDLA QV V AL K G+ V+ + G SS ++EA+ + +A EI++ATPGRLV H +
Sbjct: 31 LDARVELNLRRKCGVTALFKMQQRVVAHLLRLDAMQQSGDVVLCAPTGSGKTLAYALPLMNCVVTQANSLRCSTRECRTLRALVLVPTRDLALQVVGVLSALAHKTGVRVVAMTGQSSFSQEAKALVEAHPCLPGVFQSATEIIVATPGRLVHHLQ 186
BLAST of Gvermi4315.t1 vs. uniprot
Match: A0A7S0ISN9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0ISN9_9EUKA) HSP 1 Score: 107 bits (267), Expect = 1.600e-22 Identity = 69/152 (45.39%), Postives = 89/152 (58.55%), Query Frame = 0
Query: 140 LDPRLQTVLASQLGIHRIFPMQEALLSFILNQASIGRTGDVVLCAPTGSGKTLAYALPIIQDMLDRKIIRLRAIVVVPTRDLAAQVFSVFMALTEKFGISVLCIVGSSSTA--EEARNV---------------PKAEILIATPGRLVRHFR 274
L+ RL LA ++GI R FP+Q ++ +L S G GDV +CAPTGSGKTLAYALP++Q +L + RLRA+V+VPTR LA QV SVF L + + V VG + + EE R + +ILIATPGRLV H R
Sbjct: 142 LNDRLGAALA-RMGIRRAFPVQATVVPLVLAAHSSGIGGDVCVCAPTGSGKTLAYALPVVQQLLAVVVHRLRALVLVPTRGLALQVHSVFEQLCAELPLRVAVAVGGNEVSWEEERRTLLGDPDELLVGAEHARAAVDILIATPGRLVEHLR 292
BLAST of Gvermi4315.t1 vs. uniprot
Match: A0A7S1TIA8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIA8_9RHOD) HSP 1 Score: 106 bits (264), Expect = 1.100e-21 Identity = 63/141 (44.68%), Postives = 82/141 (58.16%), Query Frame = 0
Query: 140 LDPRLQTVLASQLGIHRIFPMQEALLSFILNQASIGRTGDVVLCAPTGSGKTLAYALPIIQDMLDRKIIRLRAIVVVPTRDLAAQVFSVFMALTEKFGISVLCIVGS----------SSTAEEARNVPKAEILIATPGRLV 270
+ R++ + GIHR+F MQEA++ L G GDVVL APTGSGKTLAYA+P++Q + R + RLRA+VVVP RDLAAQV V + L + + V C V + +V +ILIATPGRLV
Sbjct: 23 ISKRVRRNVRKGFGIHRLFAMQEAVIRHCLELDRRGEPGDVVLSAPTGSGKTLAYAIPVVQRLRRRVVPRLRAVVVVPARDLAAQVRQVMVKLVQGTDLEVACSVDEFIPRRTRSFQGDDKNDVASVQTVDILIATPGRLV 163
BLAST of Gvermi4315.t1 vs. uniprot
Match: A0A2P6TCX3_CHLSO (DEAD-box ATP-dependent RNA helicase 1 isoform X1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TCX3_CHLSO) HSP 1 Score: 107 bits (268), Expect = 1.120e-21 Identity = 63/135 (46.67%), Postives = 84/135 (62.22%), Query Frame = 0
Query: 140 LDPRLQTVLASQLGIHRIFPMQEALLSFILNQASIGRTGDVVLCAPTGSGKTLAYALPIIQDMLDRKIIRLRAIVVVPTRDLAAQVFSVFMALTEKFGISVLCIVGSSSTAEEARNVPKA--EILIATPGRLVRH 272
LDPRL+T L GI +FP+Q + + AS DV +CAPTGSGKTL+YALP++Q + R + RLRA+ V+PTRDLA+QVFSV L G++ G + A EA + +IL+ATPGRL+ H
Sbjct: 138 LDPRLKTALEGS-GIEVLFPVQAVVWAQTAGGASAAH--DVCICAPTGSGKTLSYALPVLQALAGRAVPRLRALAVLPTRDLASQVFSVLSTLCPALGLTACLACGKAGLAAEAELLAAGGIDILVATPGRLIAH 269
BLAST of Gvermi4315.t1 vs. uniprot
Match: A0A1Y3NCP4_PIRSE (Uncharacterized protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NCP4_PIRSE) HSP 1 Score: 106 bits (265), Expect = 1.590e-21 Identity = 60/134 (44.78%), Postives = 90/134 (67.16%), Query Frame = 0
Query: 150 SQLGIHRIFPMQEALLSFILNQASIGR-TGDVVLCAPTGSGKTLAYALPIIQDMLDRKIIRLRAIVVVPTRDLAAQVFSVFMALTEKFGISVLCIVGSSS-TAEEARNVP------KAEILIATPGRLVRHFRG 275
+Q+ I +FP+Q ++L F+L+ + R TGD+ + APTGSGKTLAY LPI++ + R I RLRA++++PTRDL AQV F T+K + V+ I GS S T+E+++ + K +++IATPGRL+ H G
Sbjct: 60 NQMKITHLFPVQTSVLPFLLSTPTSTRMTGDLCVSAPTGSGKTLAYVLPIVETLSKRIIQRLRALIILPTRDLVAQVKETFNYFTQKTNLKVIAITGSISFTSEQSQLIDEKTGNCKVDVVIATPGRLIDHLNG 193
BLAST of Gvermi4315.t1 vs. uniprot
Match: A0A7S4B177_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B177_CHRCT) HSP 1 Score: 107 bits (267), Expect = 1.680e-21 Identity = 68/162 (41.98%), Postives = 88/162 (54.32%), Query Frame = 0
Query: 140 LDPRLQTVLASQLGIHRIFPMQEALLSFILNQASIGRTGDVVLCAPTGSGKTLAYALPIIQDMLDRKIIRLRAIVVVPTRDLAAQVFSVFMALTEKFGISVLCIVGSSSTAEEARNVP---------------------------KAEILIATPGRLVRHFR 274
LD RL L S++GI R FP+Q ++ +L A+ GDV +CAPTGSGKTL YALP++Q +L R + RLRA+V++PTR LAAQVFSVF +L + V VG + + E +ILIATPGRLV H R
Sbjct: 88 LDARLADAL-SRMGITRCFPVQATVIPLVLASAAAHCAGDVCVCAPTGSGKTLGYALPLLQSLLGRVVRRLRALVLLPTRGLAAQVFSVFESLCATLPLRVGIAVGGADVSWETERAALTGDDAHAXXXXXXXXXXXXXXXXGSSAVDILIATPGRLVEHLR 248
BLAST of Gvermi4315.t1 vs. uniprot
Match: E1ZNU6_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZNU6_CHLVA) HSP 1 Score: 106 bits (265), Expect = 2.290e-21 Identity = 63/138 (45.65%), Postives = 83/138 (60.14%), Query Frame = 0
Query: 140 LDPRLQTVLASQLGIHRIFPMQEALLSFILNQASIGRTGDVVLCAPTGSGKTLAYALPIIQDMLDRKIIRLRAIVVVPTRDLAAQVFSVFMALTEKFGISVLCIVGSSSTAEEARNVPKA--EILIATPGRLVRHFRG 275
LDPRL+ L GI +FP+Q AS D+ +CAPTGSGKTL+YALP++Q + R + RLRA+VV+PTRDLA QVF V L G++ G +S A EA+ + +IL+ATPGRL+ H G
Sbjct: 145 LDPRLRRALEGT-GIEVLFPVQTVAWRETAGGASPAH--DICICAPTGSGKTLSYALPVLQALSGRAVPRLRALVVLPTRDLAVQVFGVLAGLCPALGLAACLAAGKASLAAEAQLLASGGVDILVATPGRLIAHLEG 279 The following BLAST results are available for this feature:
BLAST of Gvermi4315.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi4315.t1 ID=Gvermi4315.t1|Name=Gvermi4315.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=401bpback to top |