Gvermi4229.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4229.t1
Unique NameGvermi4229.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length918
Homology
BLAST of Gvermi4229.t1 vs. uniprot
Match: A0A2V3J1E1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1E1_9FLOR)

HSP 1 Score: 968 bits (2503), Expect = 0.000e+0
Identity = 527/914 (57.66%), Postives = 673/914 (73.63%), Query Frame = 0
Query:   19 KTARVSLVIVSVASSLILFILGFMVVTGSMYQLSKTEQLSGHRQDGTSVQIN---DYMRQIKSESIDVERNNITVVLQYLQFGYEAGSQANAPWMYTTTGAVF-EESNSSSANLAHTHVSWNENGTGNGTCASGGSGKTSRGYVDPFHFYANISDKDFSRVKVELRNLSLSSFDHINTVDGRRRWDILGQAGDSRLYSGGTFSIYNGNQILLSTRNVRWHQNISYPSPVGEAPPDDLLVGAYFTAEIDVFQSHEEWVRELDPHSIGFVLGLVTAASYGPMDCFSLSSYWIALRGFPDLKEVNVATPFASDIYNDTARSGAKQGQYKGSLASHVAQAKTLGGATSTAATVAVSSSVGGAVGSMSVSVGSAASAISPPGQGIARMLSTASFFARIGEIHGFHSDAMSEFGESMRPFVAKFPFPGFKGDKSQGGPSGGKGDSEGGEDNADLEVSVSDAVFAGCALYTSLIVIVFLLLHAVAWLFYRKKTADEKIKPQAWLVYLSSIAMSYVFAAAVLNASQYLRSHVGRGGGRPGFYVIAILQLAFIGIGFTAFVLAVVFYALRKLWRQDMKWVPRIEIPDPSVRNSP-IRGEYNASENDTFHTLFECYYSSLAGPRVWLVGLELCVVVVDSVCTAIIWNEVVVLGILIAVYASLFVLFFAFAPYVDKIEGRIVSVLGLIDLMVLVVEFMGALGSYETAEQMDYIAVILGFVSISLAVLCAIYCDLIPMSITVWGIIRRKLQRFHCLKFDGSGTS-DEESEWSFLQGSWEKESESAGD--GHTHSNSGE-ISAKGHVESQARASDRKEARVQRLSSAEGANPRHGPLTPLSQI---WKRIGRGSTASEQRLPVVVRI----NQEYDRAQRESPEVDAERHHGRVLEELCQDLGDDEEPITWPRVGQVIYQVRGRSTS 916
            K AR++++++  +S+LIL +LG+M +T S+   S   ++     D  +  I+      RQ +   IDVER N+T++L++LQFGYE+ +Q+NAPWMYT++ A F EE NS S+  AHT ++WNENGTGNGTCAS GSGK SRGYVDPFHF+ANI+D+DFS ++VELRN++LS F+HINTV G   WD+LGQAGDSR YSGG+F+++N NQ LL+TRN++W QN+SYPSP+GEAPP DLL+GAYFTAEID+F+SH+EWVRELDPH++GFVLG+VTAAS+G MDC++ +SYWI LRGFPDLKE+++  P+AS IYNDT+RSGAKQG+ +GS  SH+A A+ LG  +  A T AV++SVGGAVGSM+VSVG++ASA +PPGQGI+RMLSTASFFAR+ EIHGF SD MSEFG SM+PFVAKFP                             + +VSD +FAGCA YTS+IV+ F LLH   WL+ RKK+A  K+K QAWLVYL SIAMSYV+AAAVLN++QY+RSHVGR GG+PGFY IA+LQL FIG+GFT FV++VVF AL++L +++MKWVPRIEIPDP VR +  I GEY+  ++D FH LFECYYSSLAGPRVWL GLEL +V++DS+CTA+IWNEV+VLG+L+A+YA LF L FA APYVDK EGR+V++LGLIDLMVLVVEFMGALG Y+TAE+MDYIAVILGF S+S+A+L AIYCDLIPMSIT +G +R KL  F C++  GS ++ D ESEWSFL GSW K  E +    G     SG   +  G  +  A      E  +   +S  G++ + GP T  + +    + I    +A+ QR  V V      + E+D    +      E H GR  E        D E +TWPRVGQVIY+VR RS+S
Sbjct:   18 KVARIAIILICFSSTLILSMLGYMFMTNSL--ASTVNEIHPRVLDPVNADIHMGARTSRQTEKPQIDVERTNMTIILEHLQFGYESRTQSNAPWMYTSSEAPFAEELNSPSSVFAHTRITWNENGTGNGTCASRGSGKVSRGYVDPFHFFANITDRDFSTIEVELRNMTLSGFNHINTVRGNEEWDVLGQAGDSRRYSGGSFTVFNENQTLLATRNIQWFQNVSYPSPIGEAPPGDLLIGAYFTAEIDLFRSHDEWVRELDPHAVGFVLGIVTAASFGSMDCYTANSYWITLRGFPDLKEISIDKPYASSIYNDTSRSGAKQGRPRGSSVSHIANARDLGSVSGKATTAAVTTSVGGAVGSMTVSVGASASAAAPPGQGISRMLSTASFFARLNEIHGFQSDTMSEFGGSMKPFVAKFPXXXXXXXXXXXXXXXXXXXXXX-XXXXXXDFTVSDEIFAGCAFYTSMIVLAFFLLHLGVWLYCRKKSASTKVKYQAWLVYLFSIAMSYVYAAAVLNSTQYMRSHVGRTGGKPGFYAIAVLQLLFIGLGFTVFVMSVVFLALQRLRKREMKWVPRIEIPDPEVRQATGILGEYDTGDDDRFHNLFECYYSSLAGPRVWLAGLELLIVLLDSICTAVIWNEVIVLGLLVAIYAILFTLIFALAPYVDKNEGRLVTLLGLIDLMVLVVEFMGALGGYDTAERMDYIAVILGFASMSVAILSAIYCDLIPMSITAYGYVRAKLCTFCCIRIRGSSSNGDSESEWSFLAGSWAKTYEGSASQAGSLVDGSGSNATIDGGEDGSA------EDEITTRASEAGSDQQLGPDTLRNSVRGLLRTIRARLSANIQRPAVEVEPVDFGDDEHDAFTGDL----GEEHRGRFEE------NGDGERLTWPRVGQVIYRVRVRSSS 912          
BLAST of Gvermi4229.t1 vs. uniprot
Match: R7QB93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB93_CHOCR)

HSP 1 Score: 545 bits (1403), Expect = 1.130e-179
Identity = 299/626 (47.76%), Postives = 410/626 (65.50%), Query Frame = 0
Query:  179 LRNLSLSSFDHINTVDGRRRWDILGQAGDSRLYSGGTFSIYNGNQILLSTRNVRWHQNISYPSPVGEAPPDDLLVGAYFTAEIDVFQSHEEWVRELDPHSIGFVLGLVTAASYGPMDCFSLSSYWIALRGFPDLKEVNVATPFASDIYNDTA--------RSGAKQGQYKGSLASHVAQAKTLGGATSTAATVAVSSSVGGAVGSMSVSVGSAASAISPPGQGIARMLSTASFFARIGEIHGFHSDAMSEFGESMRPFVAKFPFP-----GFKGDKSQGGP---------SGGKGDSEGG---EDNADLEVSVSDAVFAGCALYTSLIVIVFLLLHAVAWLFYRKKTADEKIKPQAWLVYLSSIAMSYVFAAAVLNASQYLRSHVGRGGGRPGFYVIAILQLAFIGIGFTAFVLAVVFYALRKLWRQDMKWVPRIEIPDPSVRNSP-IRGEYNASENDTFHTLFECYYSSLAGPRVWLVGLELCVVVVDSVCTAIIWNEVVVLGILIAVYASLFVLFFAFAPYVDKIEGRIVSVLGLIDLMVLVVEFMGALGSYETAEQMDYIAVILGFVSISLAVLCAIYCDLIPMSITVWGIIRRKLQRFH----CLKFDGSGTSDEESEWSFL 774
            +RNLSLS F HINTV+    W+  G+AGD+R YS G F I+   ++LLS++NV+W QNISYP P+GEA    + +GAYF AEI   +S E+WV +LDP+S G+VLG++TAAS+GP  CFS +SYW++LRG P+         F+ D Y  TA        + G+K G Y+GS    +  A+ +     TA      ++V GA                PPGQG+ R+L TA+F A++ EIHGFHSDAM++FG  ++ F+ K  +P     G   + S   P         SG   DS      ++  + EVSVSD +F GCA YTSLIVI FL LHA  WL  RKK   E++ P AW++YL S+ MS+V+ AAVLN+ QY+RSHVG G G+ G Y++A+LQL  IGIGFTAF + V+  ALR++ R+++KW+P+ EI DP +R S  I GEY A END+FH LFECYYSSLAGPR+WL  LEL ++ +D++ TA+IWNEVV L IL+++YA LF LF   AP+VDK+EG ++ VLGL++ ++LV++F+GALG Y++AE M++ +++LGFV+I LAV+ A+YCDLIP    +W   RR+ +R       L+   SG +D  SEWS L
Sbjct:    1 MRNLSLSDFSHINTVNSSGSWNTSGEAGDTRRYSHGRFRIFTKEKVLLSSKNVQWVQNISYPGPIGEAHEGTMSIGAYFVAEIQHLKSDEDWVHQLDPNSAGYVLGVLTAASFGPTSCFSSNSYWVSLRGLPN---------FSDDSYEGTAGTPVLDGEQGGSKVGIYQGSSERAIKTAQVMASTAKTAVIGVAGATVAGAXXXXXXXXXXXXXVQGPPGQGLVRLLGTAAFVAKLNEIHGFHSDAMAKFGNGLKIFIGKVEWPFSGGLGVANETSSNSPEFTGNQTLLSGNGSDSFASMIRQETENREVSVSDELFGGCAFYTSLIVIGFLSLHAFIWLCTRKKPWQEQLVPHAWMIYLFSVVMSHVYRAAVLNSMQYMRSHVGAGTGKGGLYLVAVLQLLVIGIGFTAFFVGVMVLALRRVRRREVKWIPKNEIADPDMRQSALISGEYQAEENDSFHVLFECYYSSLAGPRLWLAALELGIIFLDAIFTALIWNEVVCLAILVSLYAILFGLFLLLAPFVDKVEGTLIVVLGLVEFVLLVMDFLGALGDYDSAEGMEFGSLVLGFVAIGLAVVIAVYCDLIPTISALWAAARRRFRRGRRADSTLEEQSSGDAD--SEWSEL 615          
BLAST of Gvermi4229.t1 vs. uniprot
Match: A0A1X6PIB8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIB8_PORUM)

HSP 1 Score: 300 bits (767), Expect = 1.330e-83
Identity = 206/662 (31.12%), Postives = 328/662 (49.55%), Query Frame = 0
Query:  149 GSGKTSRGYVDPFHFYANIS----DKDFSRVKVELRNLSLSSFDHINTVDGR---RRWDILGQAGDSRLYSGGTFSIYNGN-QILLSTRNVRWHQNISYPSPVGEAPPDDLLVGAYFTAEIDVFQSHEEWVRELDPHSIGFVLGLVTAASYGPMDCFSLSSYWIALRGFPDLKEVNVATPFASDIYNDTARSGA-------KQGQYKGSLASHVAQAKTLGGATSTAATVAVSSSVGGAVGSMSVSVGSAASAISPPGQGIARMLSTASFFARIGEIHGFHSDAMSEFGESMRPFVAKFPFPGFKGDKSQGGPSGGK-----------GD--------SEGGEDNADLEVSVSDAVFAGCALYTSLIVIVFLLLHAVAWLFYRKKTADEKIKPQAWLVYLSSIAMSYVFAAAVLNASQYLRSHVGRGGGRPGFYVIAILQLAFIGIGFTAFVLAVVFYALRKLWRQDMKWVPRIEIPDPSVRNSP-IRGEYNASEN------------------------------------DTFHTLFECYYSSLAGPRVWLVGLELCVVVVDSVCTAIIWNEVVVLGILIAVYASLFVLFFAFAPYVDKIEGRIVSVLGLIDLMVLVVEFMGALGSYETAEQMDYIAVILGFVSISLAVLCAIYCDLIPM 739
            GSG+ S G+VD       +        +++V V +    L  F H+N + G    R W ++G AGD R Y  G+  ++  N   LLS  +V+W QN SYPSP G        +GAY     +  ++   W   LDP   G  L ++ +A+     C++ ++YW  +R  P      +AT  AS     +A  G+       ++G+   S    VA ++ +G   S  A V   +S   A+G  ++ V   + ++ P GQG+   ++ A+F A++ +++ FHSDA   F  S   F+ +        DK      GG+           GD        S    + A    +++  +F GCA Y ++IV V LL+H +  +F  +K  + ++    W+VYL ++A++Y+F AAVLN+ QYL ++V  G G P  YV+A LQL+ IGIG+T F + ++ YA+ +   + ++WV R + PDP VR    I G Y A                                         FH LF CYY  L GP VWL  LEL V++ D +  A I NEV+VL +++ V+A LF LF   +P+ DKIEG   +++ +++L+++++EF     +   AEQ++   V+LGFV++ L +LCA++ D  PM
Sbjct:  215 GSGRVSHGHVDDATVSLGLPLAQLPVSWAKVHVSIDGFGLEKFQHMNMLSGSTASRDWAVMGAAGDQRTYQNGSVDVWEENGSFLLSAYDVKWVQNTSYPSPFGPGESRSYQIGAYLLGRYNASRTSAAWASRLDPEGHGIFLAVLQSAAMAKPGCYASNNYWFTVRPLPSAAITALATVTAS---GGSAVGGSVLDIPAHRRGRAIASSEKSVAFSQVMGNLASGGALVFTGASAMLALGGAAIGVAGGSVSVGP-GQGVIHTVTAAAFIAQLRQVNTFHSDAFEAFSSSFDGFLLR--------DKRAPWDKGGQSSSARYVIRLAGDYLSRTVRQSADAANQAPERNTIAHDLFVGCAFYATIIVGVALLIHGLVAVFTWRKPMEVQLNSHKWMVYLLALALTYIFPAAVLNSLQYLLTNVPAGTGHPVLYVVAGLQLSVIGIGYTLFFIFIIAYAIHQQRLKRVRWVKREDAPDPLVRQDRFISGVYEADGELPVAGGADDIVLGLDNAPLGSVASTGTTRGRRSRRLHAFHELFACYYDFLRGPLVWLAALELIVILSDCIFVATIENEVLVLSLMLGVHAGLFALFLFLSPFTDKIEGVFFTLVTVLELLMIMMEFASIFSADPLAEQLNLTLVVLGFVTMGLVILCAVWTDAYPM 864          
BLAST of Gvermi4229.t1 vs. uniprot
Match: A0A7S1EQC9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQC9_9RHOD)

HSP 1 Score: 118 bits (295), Expect = 2.720e-25
Identity = 73/232 (31.47%), Postives = 112/232 (48.28%), Query Frame = 0
Query:   76 IKSESIDVERNNITVVLQYLQFG---YEAGSQANAPWMYTTTGAVFEESNSSSANLAHTHVSWNENGTGNGTCASGGSGKTSRGYVDPFHFYANISDKDFSRVKVELRNLSLSSFDHINTVDGRRRWDILGQAGDSRLYSG-GTFSIY-NGNQILLSTRNVRWHQNISYPSPVGEAPPDDLLVGAYFTAEIDVFQSHEEWVRELDPHSIGFVLGLVTAASYGPMDCFSLSSY 302
            ++S+ +  ER  + V  + + +G   Y  G Q   PWM+      F ES S     A   +S +    G+ +C SGG  +T+  ++             F      + +L+L  F+ INTV+    WD LG+AGD+R YSG  TF I  N   ++L   N+ + Q ++YPSP G A P   +  AYF    D+  +  EW  +LDP   G   G ++A S G   C+S +S+
Sbjct:   22 VQSQIVPRERR-VVVRFENMVYGPASYLEGFQT--PWMFDEGDDPFTESMSDIGRYAFRTMSMSPGNVGDSSCESGGISRTTTTFIRAVDINLESPPSSFDGYSASITDLNLDDFEKINTVNEGEPWDTLGEAGDTRFYSGPATFEIRDNSGNVVLRAVNINYTQTLTYPSPAGAAAPGTFITAAYFLGMYDLDATDREWREQLDPDQNGVFFGALSAPSLGGNRCYSANSF 250          
The following BLAST results are available for this feature:
BLAST of Gvermi4229.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J1E1_9FLOR0.000e+057.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QB93_CHOCR1.130e-17947.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PIB8_PORUM1.330e-8331.12Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1EQC9_9RHOD2.720e-2531.47Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 805..819
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 782..837
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 497..507
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 628..649
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 548..574
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 575..627
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 683..702
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 655..676
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 529..547
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 475..496
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 703..713
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..474
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 677..682
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 748..917
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 650..654
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 714..747
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 508..528
NoneNo IPR availableTMHMMTMhelixcoord: 474..496
NoneNo IPR availableTMHMMTMhelixcoord: 551..573
NoneNo IPR availableTMHMMTMhelixcoord: 628..650
NoneNo IPR availableTMHMMTMhelixcoord: 509..531
NoneNo IPR availableTMHMMTMhelixcoord: 715..747
NoneNo IPR availableTMHMMTMhelixcoord: 683..705
NoneNo IPR availableTMHMMTMhelixcoord: 23..45
NoneNo IPR availableTMHMMTMhelixcoord: 654..676

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:806470..809319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4229.t1Gvermi4229.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 806470..809319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4229.t1 ID=Gvermi4229.t1|Name=Gvermi4229.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=918bp
MNPASRSCRGPLNLPLILKTARVSLVIVSVASSLILFILGFMVVTGSMYQ
LSKTEQLSGHRQDGTSVQINDYMRQIKSESIDVERNNITVVLQYLQFGYE
AGSQANAPWMYTTTGAVFEESNSSSANLAHTHVSWNENGTGNGTCASGGS
GKTSRGYVDPFHFYANISDKDFSRVKVELRNLSLSSFDHINTVDGRRRWD
ILGQAGDSRLYSGGTFSIYNGNQILLSTRNVRWHQNISYPSPVGEAPPDD
LLVGAYFTAEIDVFQSHEEWVRELDPHSIGFVLGLVTAASYGPMDCFSLS
SYWIALRGFPDLKEVNVATPFASDIYNDTARSGAKQGQYKGSLASHVAQA
KTLGGATSTAATVAVSSSVGGAVGSMSVSVGSAASAISPPGQGIARMLST
ASFFARIGEIHGFHSDAMSEFGESMRPFVAKFPFPGFKGDKSQGGPSGGK
GDSEGGEDNADLEVSVSDAVFAGCALYTSLIVIVFLLLHAVAWLFYRKKT
ADEKIKPQAWLVYLSSIAMSYVFAAAVLNASQYLRSHVGRGGGRPGFYVI
AILQLAFIGIGFTAFVLAVVFYALRKLWRQDMKWVPRIEIPDPSVRNSPI
RGEYNASENDTFHTLFECYYSSLAGPRVWLVGLELCVVVVDSVCTAIIWN
EVVVLGILIAVYASLFVLFFAFAPYVDKIEGRIVSVLGLIDLMVLVVEFM
GALGSYETAEQMDYIAVILGFVSISLAVLCAIYCDLIPMSITVWGIIRRK
LQRFHCLKFDGSGTSDEESEWSFLQGSWEKESESAGDGHTHSNSGEISAK
GHVESQARASDRKEARVQRLSSAEGANPRHGPLTPLSQIWKRIGRGSTAS
EQRLPVVVRINQEYDRAQRESPEVDAERHHGRVLEELCQDLGDDEEPITW
PRVGQVIYQVRGRSTST*
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