Gvermi4223.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4223.t1
Unique NameGvermi4223.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length267
Homology
BLAST of Gvermi4223.t1 vs. uniprot
Match: A0A2V3J1G4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1G4_9FLOR)

HSP 1 Score: 270 bits (691), Expect = 2.250e-87
Identity = 145/267 (54.31%), Postives = 184/267 (68.91%), Query Frame = 0
Query:    1 MSRKRHLQYPDTPDSKRYLNGALADQLQDLRISRIPSAPQSS-KNAFGVSLPPSAFYSNNFNPSNDVPRFGHAPIGVDFGSDFARSLPSEPIPVSQQNRFSQIPIVTNPESSDSSSNSVAMEDDDIGPQFNTNVVVDNSMDDLIVEDCDSEPSNENRLVVYRPPVRTNRNFISRVNAVLPDGNYAIRNPKTDEWMIVARNRAEGVKRKLALVPWTGDPHKKLCDSLHNPSRVIAMPWHDSPSEVTVLEIPHEVQDSPQQAMEIEDIS 266
            MSRKR L   D P +KRYLNGALA +L+ LRIS  P   + S +NAFGVS  PS FY+ NF+ +N  P F   P GV FG DF RSL SEP P +Q+      P+VT+P+SSDSSS SV M D +       N    N+++D+ +E+CD+EPS+ENRL+VYRPPVRT+ N +SR+NAVLPD    +RNPKT+EWM VAR+R +  KRKLALVPW GDP KKLCDSL  P+RVI MPWHD+ +  T++E   E      + M+IE++S
Sbjct:   23 MSRKRTLHPTDAPLAKRYLNGALAAELRGLRISGTPIQSEPSVRNAFGVSFAPSTFYTPNFDSNNVSPTFAQCPNGVAFGDDFVRSLQSEPTPFAQKISEVPQPVVTDPDSSDSSSGSVTMSDVEYEHGQILNDASGNAVEDVTIEECDTEPSSENRLIVYRPPVRTSGNLVSRMNAVLPDTRSILRNPKTNEWMFVARSRPDNAKRKLALVPWEGDPQKKLCDSLGRPTRVIPMPWHDNATSDTIVETIDESTGVSYEDMKIEELS 289          
BLAST of Gvermi4223.t1 vs. uniprot
Match: R7QBA2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBA2_CHOCR)

HSP 1 Score: 133 bits (335), Expect = 4.070e-34
Identity = 104/287 (36.24%), Postives = 143/287 (49.83%), Query Frame = 0
Query:    1 MSRKRHLQYP----DTPDSKRYLNGALADQLQDLRISRIPSAPQSSKNAFGVSLPPSAFY--SNNFNPSNDV----PRFGHAPIGVDFGSDFARSLPSEPIPVSQQNRFSQIPIVTNPESS---------DSSSNSVAMEDDDIGPQFNTNVVVDNSMDDLIVEDCDSEPSNENRLVVYRPPVRTNRNFISRVNAVLPDGNYAIRNPKTDEWMI--VARNRAEGVKRKLALVPWTGDPHKKLCDSLHNPSRVIAMPWHDSPSEVTVLEIPHEVQDSPQQAMEIEDIS 266
            MSRKRH   P    + P  KR+LN ALA +LQ LRI          ++ FG S+  S F   S     ++D     P       GV F +DFA +L   P   S++       +  +             D+       E  D+     +++ ++ S D++IVED D+  S ENRLVVYRPPV+T+    S ++ +LP+G Y +RNP  DEW++  V  NR    KRKLALVPW G   K+ CDS+   + VI MPWH+S  EV             +Q ME+EDIS
Sbjct:    1 MSRKRHSPEPGPTAEGPQVKRHLNSALAAELQSLRIGGRTEPQHPPQHFFGASVVSSPFLYASPRTRVAHDSQLASPNVYQHDNGVTFSADFADTLDERPKLFSRETTPKSDVVTPSXXXXXXXXXXXXXDNEGYMRDSESVDVKGYEASHMRLETSNDNVIVEDIDAPISEENRLVVYRPPVKTSAAGFSELSGLLPNGQYFVRNPGADEWVLKEVQNNRN---KRKLALVPWRGGT-KRFCDSVQKQAVVIPMPWHESTPEVDA-----------EQVMEVEDIS 272          
The following BLAST results are available for this feature:
BLAST of Gvermi4223.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1G4_9FLOR2.250e-8754.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBA2_CHOCR4.070e-3436.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 262..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:787848..788648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4223.t1Gvermi4223.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 787848..788648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4223.t1 ID=Gvermi4223.t1|Name=Gvermi4223.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=267bp
MSRKRHLQYPDTPDSKRYLNGALADQLQDLRISRIPSAPQSSKNAFGVSL
PPSAFYSNNFNPSNDVPRFGHAPIGVDFGSDFARSLPSEPIPVSQQNRFS
QIPIVTNPESSDSSSNSVAMEDDDIGPQFNTNVVVDNSMDDLIVEDCDSE
PSNENRLVVYRPPVRTNRNFISRVNAVLPDGNYAIRNPKTDEWMIVARNR
AEGVKRKLALVPWTGDPHKKLCDSLHNPSRVIAMPWHDSPSEVTVLEIPH
EVQDSPQQAMEIEDIS*
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