Gvermi4217.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4217.t2
Unique NameGvermi4217.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length285
Homology
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BLAST of Gvermi4217.t2 vs. uniprot
Match: A0A2V3J180_9FLOR (Transcription factor-like protein DPB n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J180_9FLOR)

HSP 1 Score: 311 bits (798), Expect = 3.090e-102
Identity = 171/271 (63.10%), Postives = 200/271 (73.80%), Query Frame = 0 
Query:   26 NSFRPRAPGRRSARYSDAKRKGLRHFAIRVSNKVEQKRVTTYNQVADELVAEERVLRSAHSXXXXXXXXP-HGLVDEKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKASIAQARSRLAQKHALLTELTHQHTRTCTIVERNRT-----------ATCSDNHPQPPRXXXXVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFDDREVMRRMLQSPSSQLTSPQTVPVDPCQSISFSP 284
            NSF      +RS RYSD KRKGLRHFAIRVS KVEQ+R+TTYNQVADELVAEER LR++ S          H LVDEKNIRRRVYDSLNVLMAM IIAKDKKLI+WQGLDR+HC+PH+ +I+A+  +IA+ ++ LA K ALL +L  QH+RTC I++RNR            A+CS +H         +PVHQQY DRIGIPFFILSAPK+T IELEMDQS QDICFTFNSSFAIFDDREV+RRML S  + L + Q + VDP   I+ SP
Sbjct:  103 NSFNSNKLAQRSTRYSDVKRKGLRHFAIRVSRKVEQQRITTYNQVADELVAEERALRASQSPHNPTTPPSQHALVDEKNIRRRVYDSLNVLMAMGIIAKDKKLISWQGLDRLHCAPHSHQIAAINNAIAEKKAALAHKQALLADLKDQHSRTCAIIDRNRASNYSHIDHEDGASCSLSH-------APLPVHQQYADRIGIPFFILSAPKDTTIELEMDQSSQDICFTFNSSFAIFDDREVIRRMLPSSPTNLPT-QPIHVDPVGRITLSP 365
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BLAST of Gvermi4217.t2 vs. uniprot
Match: R7QB65_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB65_CHOCR)

HSP 1 Score: 206 bits (524), Expect = 3.590e-61
Identity = 124/259 (47.88%), Postives = 167/259 (64.48%), Query Frame = 0 
Query:   20 SVASGANSFRP----RAPGRRS---ARY----SDAKRKGLRHFAIRVSNKVEQKRVTTYNQVADELVAEERVLRS--------AHSXXXXXXXXPHGLVDEKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKASIAQARSRLAQKHALLTELTHQHTRTCTIVERNR-TATCSDNHPQPPRXXXXVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFDDREVMRRM 258
            S  + +N+FRP     AP RR+   A+Y    ++AKRKGLRHFA+RVS KVEQK VTTYN+VADELV EE +++         A +           LVDEKNIRRRVYDSLNVLMAM II K+KKLITWQGL     +     I+A+KA++A+ R  + +K  +L  +  Q +RT  ++ERN+  A   D    P      +PVH  +PDRIG+PF +  APK+  IE +MD+ R+D+ FTF+S+F IFD++E++RRM
Sbjct:   60 SSTTQSNAFRPPPVASAPTRRTSERAKYKPPETEAKRKGLRHFAVRVSRKVEQKVVTTYNEVADELVNEETMIKKQELSAGGPAAAGLRKKLEKSGNLVDEKNIRRRVYDSLNVLMAMGIIEKEKKLITWQGLAMAQSARGNGEITAMKAAVAERRQLIEEKARILAGIKDQCSRTDLLIERNKDNAKVQDFIAGPDNL---LPVHHHHPDRIGLPFVVFVAPKDATIECQMDKLREDVSFTFDSTFQIFDEKEILRRM 315
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BLAST of Gvermi4217.t2 vs. uniprot
Match: A0A0K8U885_BACLA (Transcription factor Dp n=12 Tax=Tephritidae TaxID=7211 RepID=A0A0K8U885_BACLA)

HSP 1 Score: 142 bits (357), Expect = 1.180e-35
Identity = 91/229 (39.74%), Postives = 122/229 (53.28%), Query Frame = 0 
Query:   30 PRAPGRRSARYSDAKRKGLRHFAIRVSNKVEQKRVTTYNQVADELVAEERVLRSAHSXXXXXXXXPHGLVDEKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKASIAQARSRLAQKHALLTELTHQHTRTCTIVERNRTATCSDNHPQPPRXXXXVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFDDREVMRRM 258
            P +   R  R  +   KGLRHFA++V  KV++K VTTYN+VADELVAEE  + S  S             D+KNIRRRVYD+LNVLMAM II+KDKK I W GL     S  AE+ S ++    + R R+ QKH  L EL        +++ERN+ A    N P P                I +PF I++  K T I   +   + +  F F+  F + DD +V++RM
Sbjct:  146 PHSNSARRQRKPEKAGKGLRHFALKVCEKVKEKGVTTYNEVADELVAEELHMNSIDSANC----------DQKNIRRRVYDALNVLMAMEIISKDKKEIRWIGLP----SNSAEQCSELERQNEECRQRIQQKHQQLNELLLHQVAFKSLIERNKEAERQGNVPTPN-------------SSIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDDQFEMHDDAQVLKRM 347
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BLAST of Gvermi4217.t2 vs. uniprot
Match: A0A0A1XEM3_ZEUCU (Transcription factor Dp n=7 Tax=Dacinae TaxID=164860 RepID=A0A0A1XEM3_ZEUCU)

HSP 1 Score: 141 bits (356), Expect = 1.920e-35
Identity = 91/229 (39.74%), Postives = 122/229 (53.28%), Query Frame = 0 
Query:   30 PRAPGRRSARYSDAKRKGLRHFAIRVSNKVEQKRVTTYNQVADELVAEERVLRSAHSXXXXXXXXPHGLVDEKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKASIAQARSRLAQKHALLTELTHQHTRTCTIVERNRTATCSDNHPQPPRXXXXVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFDDREVMRRM 258
            P +   R  R  +   KGLRHFA++V  KV++K VTTYN+VADELVAEE  + S  S             D+KNIRRRVYD+LNVLMAM II+KDKK I W GL     S  AE+ S ++    + R R+ QKH  L EL        +++ERN+ A    N P P                I +PF I++  K T I   +   + +  F F+  F + DD +V++RM
Sbjct:  146 PHSNSARRQRKPEKAGKGLRHFALKVCEKVKEKGVTTYNEVADELVAEELHMNSIDSANC----------DQKNIRRRVYDALNVLMAMEIISKDKKEIRWIGLP----SNSAEQCSDLERQNEECRQRIQQKHQQLNELLLHQVAFKSLIERNKEAERQGNVPTPN-------------SSIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDDQFEMHDDAQVLKRM 347
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BLAST of Gvermi4217.t2 vs. uniprot
Match: W4FM68_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FM68_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.250e-34
Identity = 90/223 (40.36%), Postives = 121/223 (54.26%), Query Frame = 0 
Query:   41 SDAKRKGLRHFAIRVSNKVEQKRVTTYNQVADELVAEERVLRSAHSXXXXXXXXPHGLVDEKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKASIAQARSRLAQKHALLTELTHQHTRTCTIVERNR-----TATCSDNHPQPPRXXXXVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFDDREVMRRM 258
            SD   KGLRHF+++V  KVE+K VTTYN+VADELV E   +R A S             DEKNIRRRVYD+LNVLMAM II+K+KK I W+GL     S   + +  ++   AQ    + QK   L EL  Q      +++RN+     +A C                      RI +PF +++  K+T I+ EM + RQDI F F+  F I DD E+++RM
Sbjct:  201 SDKGSKGLRHFSMKVCQKVEEKHVTTYNEVADELVHEFVTMRPAESVNY----------DEKNIRRRVYDALNVLMAMDIISKEKKEIRWRGLP----SNAKQDLELLQMENAQRAKSVEQKKQQLQELLLQQIALKNLIQRNKQVDKPSALC----------------------RISLPFILVNTSKDTIIQCEMSEDRQDIFFNFSGPFEINDDSEILKRM 387
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BLAST of Gvermi4217.t2 vs. uniprot
Match: UPI0018CE8988 (transcription factor Dp isoform X1 n=2 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CE8988)

HSP 1 Score: 137 bits (345), Expect = 5.590e-34
Identity = 91/247 (36.84%), Postives = 127/247 (51.42%), Query Frame = 0 
Query:   12 SLYHVAHASVASGANSFRPRAPGRRSARYSDAKRKGLRHFAIRVSNKVEQKRVTTYNQVADELVAEERVLRSAHSXXXXXXXXPHGLVDEKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKASIAQARSRLAQKHALLTELTHQHTRTCTIVERNRTATCSDNHPQPPRXXXXVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFDDREVMRRM 258
            S  H  H++ +S     +P   G           KGLRHF+++V  KV++K  TTYN+VADELV EE +  S++              D+KNIRRRVYD+LNVLMAM+II+KDKK I W GL     +   E+I  ++    + R R+ QKH  L EL  Q     +++ERN+ +    N P P                I IPF I++  K T I   +   + +  F F+  F + DD EVM+RM
Sbjct:  136 SKIHATHSTNSSVQKKRKPEKAG-----------KGLRHFSMKVCEKVKEKGTTTYNEVADELVTEE-IKNSSYDSVNC---------DQKNIRRRVYDALNVLMAMQIISKDKKEIRWIGLP----TNSVEQIQHIEKENEERRERIKQKHQQLRELLMQQVAFKSLIERNKESEHLGNVPTPN-------------SSIQIPFIIVNTHKSTKINCSVTNDKSEYIFKFDDKFEMHDDAEVMKRM 344
[Close]
BLAST of Gvermi4217.t2 vs. uniprot
Match: A0A8J6CHE7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHE7_DIALT)

HSP 1 Score: 137 bits (344), Expect = 6.840e-34
Identity = 93/221 (42.08%), Postives = 123/221 (55.66%), Query Frame = 0 
Query:   38 ARYSDAKRKGLRHFAIRVSNKVEQKRVTTYNQVADELVAEERVLRSAHSXXXXXXXXPHGLVDEKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKASIAQARSRLAQKHALLTELTHQHTRTCTIVERNRTATCSDNHPQPPRXXXXVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFDDREVMRRM 258
            A   D   KGLRHF+++V NKVE+K  TTYN+VADELVAE        S             DEKNIRRRVYD+LNVLMAM IIAK+KK ITW+GL   + +  A+R+   +  + + R R+  K   L EL  Q      +V RNR         QP      VP      +R+ +PF I++  K+T I+ EM + + DI F F+  F I DD E+++RM
Sbjct:   98 AHTGDKNNKGLRHFSMKVCNKVEEKSRTTYNEVADELVAEFVPTDGISSMDQAY--------DEKNIRRRVYDALNVLMAMDIIAKEKKNITWRGLP-TNAAQEADRL---QVDVEERRERIEVKRLQLQELLTQQISFKHLVSRNRA--------QP----NAVPEL----NRVHLPFIIVNTSKQTVIDCEMAEDKHDIFFNFSMPFEIHDDNEILKRM 290
[Close]
BLAST of Gvermi4217.t2 vs. uniprot
Match: UPI0018643CDC (transcription factor Dp-1-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018643CDC)

HSP 1 Score: 134 bits (338), Expect = 3.410e-33
Identity = 92/251 (36.65%), Postives = 134/251 (53.39%), Query Frame = 0 
Query:    8 PNRPSLYHVAHASVASGANSFRPRAPGRRSARYSDAKRKGLRHFAIRVSNKVEQKRVTTYNQVADELVAEERVLRSAHSXXXXXXXXPHGLVDEKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKASIAQARSRLAQKHALLTELTHQHTRTCTIVERNRTATCSDNHPQPPRXXXXVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFDDREVMRRM 258
            P+ PS   +AH    S      P + G+RS +  +   KGLRHF+++V  KV++K VTTYN+VADELVAE      +++        PH + D+KNIRRRVYD+LNVLMAM II+K+KK I W GL     +  A+    ++    +   R+ +K + L EL  Q      +V+RNR        P PP               I +PF I++  K+T I+  +   + +  F F++ F I DD EV++RM
Sbjct:   78 PHTPSAQFLAHGQPDSS-----PWSTGKRSKK-GEKNGKGLRHFSMKVCEKVQKKGVTTYNEVADELVAE-----FSNADTHMSPTDPH-VYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWIGLP----TNSAQECQNMEVEKQRRLERIREKQSQLQELILQQIAFKNLVQRNRQVEQQTKRPPPPNSV------------IHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNMFEIHDDIEVLKRM 300
[Close]
BLAST of Gvermi4217.t2 vs. uniprot
Match: A0A024UL33_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UL33_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.630e-33
Identity = 91/237 (38.40%), Postives = 123/237 (51.90%), Query Frame = 0 
Query:   22 ASGANSFRPRAPGRRSARYSDAKRKGLRHFAIRVSNKVEQKRVTTYNQVADELVAEERVLRSAHSXXXXXXXXPHGLVDEKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKASIAQARSRLAQKHALLTELTHQHTRTCTIVERNRTATCSDNHPQPPRXXXXVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFDDREVMRRM 258
            AS     +PRAP   +   SD   KGLRHF+++V  KVE+K VTTYN+VADELV E   +R A S             DEKNIRRRVYD+LNVLMAM II+K+KK I W+GL     S   + +  ++   AQ    +  K                ++ RN+         +PP              RI +PF +++  K+T I+ EM + RQDI F F+  F I DD E+++RM
Sbjct:  188 ASTPKKKKPRAPVMSTTPLSDKGSKGLRHFSMKVCQKVEEKHVTTYNEVADELVHEFVTMRPAESVNY----------DEKNIRRRVYDALNVLMAMDIISKEKKEIRWRGLP----SNAKQDLELLQMERAQRAKSVELKKQXXXXXXXXXXALKNLIRRNK------QEDKPPAL-----------SRIALPFILVNTSKDTVIQCEMSEDRQDIFFNFSGPFEINDDSEILKRM 393
[Close]
BLAST of Gvermi4217.t2 vs. uniprot
Match: A0A6G0X5Q3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5Q3_9STRA)

HSP 1 Score: 134 bits (337), Expect = 4.670e-33
Identity = 94/243 (38.68%), Postives = 127/243 (52.26%), Query Frame = 0 
Query:   16 VAHASVASGANSFRPRAPGRRSARYSDAKRKGLRHFAIRVSNKVEQKRVTTYNQVADELVAEERVLRSAHSXXXXXXXXPHGLVDEKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKASIAQARSRLAQKHALLTELTHQHTRTCTIVERNRTATCSDNHPQPPRXXXXVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFDDREVMRRM 258
            ++    ++ A   +PRA        S+   KGLRHF+++V  KVE+K VTTYN+VADELV E   +R A S           + DEKNIRRRVYD+LNVLMAM II+K+KK I W+GL     S   + +  + A   Q    + QK   L EL  Q      +  RN+        P P               RI +PF +++  KET I+ EM + RQDI F F+  F I DD E+++RM
Sbjct:  161 LSFLGTSASAKKKKPRAAA--GTPLSEKGSKGLRHFSMKVCQKVEEKHVTTYNEVADELVHEFVTMRPADS-----------VYDEKNIRRRVYDALNVLMAMDIISKEKKEIRWRGLP----SNAKQDLELLVAERNQRVKNIEQKKQQLQELLLQQIALKNLHLRNKQ---EKEKPAPL-------------SRISLPFILVNTSKETVIQCEMSEDRQDIFFNFSGPFEINDDSEILKRM 370
The following BLAST results are available for this feature:
BLAST of Gvermi4217.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J180_9FLOR3.090e-10263.10Transcription factor-like protein DPB n=1 Tax=Grac... [more]
R7QB65_CHOCR3.590e-6147.88Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0K8U885_BACLA1.180e-3539.74Transcription factor Dp n=12 Tax=Tephritidae TaxID... [more]
A0A0A1XEM3_ZEUCU1.920e-3539.74Transcription factor Dp n=7 Tax=Dacinae TaxID=1648... [more]
W4FM68_9STRA2.250e-3440.36Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
UPI0018CE89885.590e-3436.84transcription factor Dp isoform X1 n=2 Tax=Teleops... [more]
A0A8J6CHE7_DIALT6.840e-3442.08Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
UPI0018643CDC3.410e-3336.65transcription factor Dp-1-like n=1 Tax=Megalops cy... [more]
A0A024UL33_9STRA3.630e-3338.40Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A6G0X5Q3_9STRA4.670e-3338.68Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014889Transcription factor DP, C-terminalSMARTSM01138DP_2coord: 143..283
e-value: 2.7E-6
score: 31.9
IPR014889Transcription factor DP, C-terminalPFAMPF08781DPcoord: 145..261
e-value: 1.4E-15
score: 57.3
IPR003316E2F/DP family, winged-helix DNA-binding domainSMARTSM01372E2F_TDP_2coord: 43..132
e-value: 5.8E-21
score: 85.6
IPR003316E2F/DP family, winged-helix DNA-binding domainPFAMPF02319E2F_TDPcoord: 44..132
e-value: 1.8E-15
score: 56.5
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 37..137
e-value: 4.7E-31
score: 108.5
IPR038168Transcription factor DP, C-terminal domain superfamilyGENE3D1.20.140.80Transcription factor DPcoord: 141..276
e-value: 5.7E-22
score: 79.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..279
NoneNo IPR availablePANTHERPTHR12548:SF9TRANSCRIPTION FACTOR DPcoord: 27..263
IPR015648Transcription factor DPPANTHERPTHR12548TRANSCRIPTION FACTOR DPcoord: 27..263
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 46..133
IPR037241E2F-DP heterodimerization regionSUPERFAMILY144074E2F-DP heterodimerization regioncoord: 146..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:767418..768272 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4217.t2Gvermi4217.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 767418..768272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4217.t2 ID=Gvermi4217.t2|Name=Gvermi4217.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=285bp
LSPPLQLPNRPSLYHVAHASVASGANSFRPRAPGRRSARYSDAKRKGLRH
FAIRVSNKVEQKRVTTYNQVADELVAEERVLRSAHSHSHSHAPAPHGLVD
EKNIRRRVYDSLNVLMAMRIIAKDKKLITWQGLDRVHCSPHAERISAVKA
SIAQARSRLAQKHALLTELTHQHTRTCTIVERNRTATCSDNHPQPPRPQP
PVPVHQQYPDRIGIPFFILSAPKETNIELEMDQSRQDICFTFNSSFAIFD
DREVMRRMLQSPSSQLTSPQTVPVDPCQSISFSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014889Transc_factor_DP_C
IPR003316E2F_WHTH_DNA-bd_dom
IPR036388WH-like_DNA-bd_sf
IPR038168TF_DP_C_sf
IPR015648Transcrpt_fac_DP
IPR036390WH_DNA-bd_sf
IPR037241E2F-DP_heterodim