Gvermi4213.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4213.t1
Unique NameGvermi4213.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1034
Homology
BLAST of Gvermi4213.t1 vs. uniprot
Match: A0A2V3J2E5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2E5_9FLOR)

HSP 1 Score: 761 bits (1966), Expect = 5.910e-259
Identity = 467/984 (47.46%), Postives = 637/984 (64.74%), Query Frame = 0
Query:   67 MASTITTDHTTVHIEPQCIAHKAADLPLKPEAKYVAHKFPWRPIAEAIVQVAIFALAAVVSIRARLKVFIYIFCVLAVPQLLLIVTRFRHVANVTFARDT---DESSSEWLSESSSSDILKKPGFAATIIRKAIAEELGSFRSELIRFENLSMEREESRNLSLSQALSVVNESVLALKEEMERRDQMRPSVPYATLQELEGMRTKVSFLERENASIKQQLRAAQLSYEEALRNAAKSRKEAEDAAFRELSAREELAIAQTRLVHMDELTDRLDRSEAKTMQLQEELLTRARERERFKLSADDANRRVARVENIINILREQLRKLSGNSPSDGQDEPVDEDLAESEKKFWQRRLKSRGNLGRDSIVYQELLRGSKESLAKEWPSDPLGRDSSPKEEKNETLEGLPADGGFGSKNFKILESGSDPTETGKILGMSGVPSQGAFSFSRGEFQQKDEGATNGKPRTGDSVAVNDLFPEAEDVPDKASSDGEDGAEVSSEKKIEQSEAHENRNTETQTSERSQTAKDDLKDEQTQIPELN-----------SPRTGRTTDSYMQWLEKASQFESSPISSRRKSDFTSQSQYPNQKDSSASRVPSRSQPNREEPIVIQEKGDLRDIELRAQDLSETESTALKAGESQDTSKAVKNLGDKGQPNQEVDFIDEPQKGDVTERSPVLSEGAEQPSTRLDRLQDTLKPTDPGSSMPFEGSSLEGDGRAR-------QDKVLTVKVA-NDGEVANKLQEDASAARPQPAIDPGKGIERSEGPNSIARIISSKIADAQELIEKGRSSGISVSKAASFLEEAKGILEECLKLNCLRPEVEAAMGECLVVWAKLDLKDQRARGLIWEALEYLSRSVEAKPNDEKALFNCALCNALYGALSTHDIAVHHQYQAVQQFDKLLKLNPSAQVAAYNGGLAYLYLARSNIASDGKNRSVIERYFRLAIERFAKGVMLNPQDPRNAAYLDTARNEMKNFLEKDD 1028
            MA      HT + I P C+A KAADLP + +      K PWR IAEA+VQ+ I A+ A +SI+AR K F+Y+F  +AVPQL  IVTRF+     T   +    D  SSEWLS     D   K  FA ++IR+AI EE  SFRS+L  F+  S+ERE++RN  +SQA+S ++ SVL+L++++ERRDQMRP VPYATLQELE ++ +++  ERENAS+KQQLR  Q  YEE LRNA K+RK+A+DA+FREL+AREELAIAQ R+VH+DELT+RLDR+EA++M+L+EELL R RE+E  KLSADDANRRVARVEN+  +LRE+L+K++G + +  QD   ++++ +SE++ WQRRL++RGNLGR+S+VYQELLRGSKESL KEWPS+PLG D+S KEEKNE LEGLPADGGF  K  ++L+S   P    K L MS  P++  FSFSRGEF++    +T+       ++  N+LFP+ +    ++ S  ED  +V + KK E +E      T+    E  Q +  +L+     +P+ +           SP   R+++SYM+WL+++S           K+    + + P   +  ++ + S  Q    EP  + E G L        D   +        E+ DT +   N  +                G + E     SE A   + R +   +T        S+P   ++ E D +A         ++ L++K    D E   K    +S  R +P +           P+SI +I+S+K+ +A ELIEKGR  GIS+S+A+SFL++AK ILEECL+L+ LR E+EAA+GECLVVWAKLDL+D+RAR L W+ALEYL+R V+A PN+EKALFN ALCNAL+GALS+H++AVHHQY A QQFD+LL++NP+AQVAAYNGGLAYLYLARS +A +   ++ I++YF L+IERFAKGVMLNP D RNA+YLDTARNEMK FLE D+
Sbjct:    1 MAVPSNRKHTRIQIMPLCVAQKAADLPQETQRHRTTLKIPWRTIAEAVVQLVILAVGATISIQARRKFFVYLFSFMAVPQLYFIVTRFKECGPTTARLNDGTKDAPSSEWLSGPPDVDTELKTAFAESLIRQAIVEEFVSFRSDLDHFQKSSLEREDTRNTVVSQAVSSLDASVLSLRDQLERRDQMRPEVPYATLQELETLKARLNLYERENASLKQQLRNLQFMYEETLRNADKARKDAQDASFRELTAREELAIAQIRIVHLDELTNRLDRAEARSMELEEELLDRTREKEGLKLSADDANRRVARVENVSKMLREKLQKMTGRASAGEQDALSEDNVDDSEQRLWQRRLRNRGNLGRNSVVYQELLRGSKESLIKEWPSNPLGSDAS-KEEKNEALEGLPADGGFSGKGSRMLQSAPTPGGPEKALRMSEAPAEAVFSFSRGEFEKGGIASTDSST-IHKTITENELFPDGKGSAQESDSADED-KDVRTFKKEELNENVPE--TDKSAIEGKQESGGNLR-----VPKASGQHQGLDSQSFSPNRTRSSESYMEWLQESSWKRKDG----GKTKTIPRPRLPVPSEPQSADMSSGYQKGAVEPATLDEDGSLNQTRSETADGISSSVDVRGIPETFDTEEGECNTANTN--------------GSL-ENERTDSEDASSRAERSNHSLETDVQEQEVQSLPTSNTTAERDSQAEARVNGATHEEGLSLKAPFGDQEKVKK----SSNTRYKPNV-----------PSSIVKIVSNKVTNAHELIEKGRKEGISISEASSFLKQAKTILEECLRLSVLRMEIEAALGECLVVWAKLDLRDERARWLTWKALEYLTRCVKALPNNEKALFNSALCNALFGALSSHEVAVHHQYAAAQQFDRLLQINPNAQVAAYNGGLAYLYLARSYVAFERDKKADIQKYFELSIERFAKGVMLNPLDTRNASYLDTARNEMKGFLEGDE 940          
BLAST of Gvermi4213.t1 vs. uniprot
Match: R7QBB8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBB8_CHOCR)

HSP 1 Score: 292 bits (747), Expect = 2.210e-79
Identity = 292/1064 (27.44%), Postives = 485/1064 (45.58%), Query Frame = 0
Query:   41 SATGNALRFSSSVSSLQRIHFVS---SRRMASTITTDHTTVHIEPQCIAHKAADLPLKPEAKYVAHKFPWRPIAEAIVQVAIFALAAVVSIRARLKVFIYIFCVLAVPQLLLIVTRFRHVANV-TFARDTDESSSEWLSESSSSDILKKPGF-----AATIIRKAIAEELGSFRSELIRFENLSMEREESRNLSLSQALSVVNESVLALKEEMERRDQMRPSVPYATLQELEGMRTKVSFLERENASIKQQLRAAQLSYEEALRNAAKSRKEAEDAAFRELSAREELAIAQTRLVHMDELTDRLDRSEAKTMQLQEELLTRARERERFKLSADDANRRVARVENIINILREQLRKLSG---NSPSDGQDEPVDEDLAESEKKFWQRRLKSRGNLGRD-SIVYQELLRGSKE-SLAKEWPSDPLGRDSSPKEEKNET-LEGLPADGGFGSKNFKILES---GSDPTETGKILGMSGVPSQGA-FSFSRGEFQQKDEGATNGKPR---------------------TGDSVA--VNDLFPEAEDVPDKASSDGEDGAEVSSEKKIEQSEAHENR--------NTETQTSERSQTAKDDLKDEQTQIPELNSPRTGRTTDSYMQWLEKASQFESSPISSRRKSDFTSQSQYPNQKDSSASRVPSRSQPNREEPIVIQEK-----------GDLRDIELRAQD------LSETESTALK--AGESQDTSKAVKNLGDKGQPNQEVDFIDEPQKGDVT--ERSPVLSEGAEQPSTRLDRLQDTLKPTDPGSSMPFEGSSL-------EGDGRARQDKVLTVKVANDGEVANKLQEDASAARPQPAIDPGKGIERSEGPNSIARIISSKIADAQELIEKGRSSGISVSKAASFLEEAKGILEECLKLNCLRPEVEAAMGECLVVWAKLDLKDQRARGLIWEALEYLSRSVEAKPNDEKALFNCALCNALYGALSTHDIAVHHQYQAVQQFDKLLKLNPSAQVAAYNGGLAYLYLARSNIASDGKNRSVIERYFRLAIERFAKGVMLNPQDPRNAAYLDTARNEMKNFLEK 1026
            S  GN  +F   V+  +R H +    SR     I     ++ I+    A    +   K + +    +  W+   E  +Q++I  LA   S+ A+ + F +    L +PQL L + RFR    V +FA    + + E   E+  +   K+        A+  IR +I  E+   R  + + E  +++RE++RN S++ AL+ ++ES+ A++  +E R+Q+  + P+A + ELE  ++++   ERE   ++ +L+  Q ++EEA R+  ++R+EA++A  +EL  R ELA   +RL  +DE+T+RL  +E +  +L+EE++ ++RE E  + SA D+ +RV RVENI  +LRE+++ ++G   +S      +P+ +  AE+E++FWQRRL+S  ++ R  S++YQELL    + +  KEWP  PL  D   +E+K +  LE LPADGGFG  +     S   G     TG++     VP+  A FSFSRGEF    + ++   P                      TG  +A     L      V  K  S+  +  E + +K +E     E +         T   T   S+T +D+    +   P+   P    + D      +      ++P+     S      +  NQ +S+ S      Q        ++             G L D     QD       SE     L   A ESQ+ S      G        V  ++ P  G      R      G    S ++ +  +  K   P SSM    S         E  G A  D         D  V +K  E  ++ R     D    ++R     +   ++ S    A EL+++ R  G++V+++    + A   LE  + L   RP V+A  G  L+ WAK++L D  +   + +A  YLS S++ +PNDE  +FN ALC  L G+ S    A  +  +A + +D+LL LN ++++ A+N GLAY+ L R  +  D  +      YF  A+ERF   + L P D +   YL+  + E+    ++
Sbjct:   83 SFIGNQRKFHRMVAFNRRCHSLHRNVSRSRRHRIFMCDASMPIDTMAAAAVGVEGEAKQKPRRSRERATWQFFTETAIQISITGLAIAASVIAKARFFAFASAFLYLPQLFLALRRFRRELEVGSFAEMDSQGTQERRLEAMETMEAKEKQINESLLASAAIRGSIGSEVDMLRYSIEQMEISTIQREQARNRSIADALASLDESIRAVRRTVETRNQIESAAPFALVAELETSQSRLKQSEREKGELQSKLQILQANFEEAKRSGERARREADEATQKELLLRVELATVTSRLTRLDEITERLQTAELRNDELREEVVIKSREEENLRQSAADSEKRVLRVENISRVLREKMQGITGRGEHSERKRSPQPISQTEAEAEEQFWQRRLRSSASIPRPGSLLYQELLGSPSDGNYNKEWPDSPL--DGGVQEKKRQAQLENLPADGGFGDVSTTEQSSEGDGGQSVSTGQLP----VPAGDAMFSFSRGEFDSSGKPSSRTLPAAPSQEKKVDGDGPSDVPTADLTGKEIADQAGRLDMLEYQVDGKLKSEAPNVTETNPDKALEGISNFERKLGGERAISETIEATERTSETMRDEFVVGKASTPDPE-PSQSISIDGSTGTSDSDDSSTNNPVIPSGGSLSLKPLKEGNQNESNLSEKSIGDQLELTRSSTLENNVSDKSNSPAAGGSLADAVSFNQDNEGSNAKSENGGVILSPDAAESQNASTEDVLEGSSDTVTGSVQSLEMPNAGGAVLESRDTASFNGGNSVSRKVSKTDE--KAQIPSSSMEESPSGRIKGVIDEEKPGAAVTDSKSNDVTNGDSSVVDKADE--ASLRSNQVFDRNP-LQRKRPVPTPKELVDS----ANELVKQARKRGVAVAQSDGLFQRAVSKLEAAMSLGFERPYVQAEYGGALLAWAKVNLADPASYKRLTKAQRYLSASLQTRPNDEDTVFNTALCLCLLGSTSEPRQAKDYYSRACELYDRLLGLNGTSRIGAFNCGLAYISLGRLALVDDEIDEKARIGYFETALERFGTAIELKPGDGKAQTYLEDCKRELSQLRQE 1130          
The following BLAST results are available for this feature:
BLAST of Gvermi4213.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2E5_9FLOR5.910e-25947.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBB8_CHOCR2.210e-7927.44Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 262..303
NoneNo IPR availableCOILSCoilCoilcoord: 328..348
NoneNo IPR availableCOILSCoilCoilcoord: 363..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 679..703
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 659..678
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 731..758
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 593..658
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..774
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 789..814
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..1033
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..154
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..108
NoneNo IPR availableTMHMMTMhelixcoord: 134..152
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 843..1031
e-value: 3.6E-10
score: 41.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 893..1022

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:755294..758395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4213.t1Gvermi4213.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 755294..758395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4213.t1 ID=Gvermi4213.t1|Name=Gvermi4213.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1034bp
MANVVRDMKYLRVSTISVQHYKCRLPTHHAPCFLPPLPILSATGNALRFS
SSVSSLQRIHFVSSRRMASTITTDHTTVHIEPQCIAHKAADLPLKPEAKY
VAHKFPWRPIAEAIVQVAIFALAAVVSIRARLKVFIYIFCVLAVPQLLLI
VTRFRHVANVTFARDTDESSSEWLSESSSSDILKKPGFAATIIRKAIAEE
LGSFRSELIRFENLSMEREESRNLSLSQALSVVNESVLALKEEMERRDQM
RPSVPYATLQELEGMRTKVSFLERENASIKQQLRAAQLSYEEALRNAAKS
RKEAEDAAFRELSAREELAIAQTRLVHMDELTDRLDRSEAKTMQLQEELL
TRARERERFKLSADDANRRVARVENIINILREQLRKLSGNSPSDGQDEPV
DEDLAESEKKFWQRRLKSRGNLGRDSIVYQELLRGSKESLAKEWPSDPLG
RDSSPKEEKNETLEGLPADGGFGSKNFKILESGSDPTETGKILGMSGVPS
QGAFSFSRGEFQQKDEGATNGKPRTGDSVAVNDLFPEAEDVPDKASSDGE
DGAEVSSEKKIEQSEAHENRNTETQTSERSQTAKDDLKDEQTQIPELNSP
RTGRTTDSYMQWLEKASQFESSPISSRRKSDFTSQSQYPNQKDSSASRVP
SRSQPNREEPIVIQEKGDLRDIELRAQDLSETESTALKAGESQDTSKAVK
NLGDKGQPNQEVDFIDEPQKGDVTERSPVLSEGAEQPSTRLDRLQDTLKP
TDPGSSMPFEGSSLEGDGRARQDKVLTVKVANDGEVANKLQEDASAARPQ
PAIDPGKGIERSEGPNSIARIISSKIADAQELIEKGRSSGISVSKAASFL
EEAKGILEECLKLNCLRPEVEAAMGECLVVWAKLDLKDQRARGLIWEALE
YLSRSVEAKPNDEKALFNCALCNALYGALSTHDIAVHHQYQAVQQFDKLL
KLNPSAQVAAYNGGLAYLYLARSNIASDGKNRSVIERYFRLAIERFAKGV
MLNPQDPRNAAYLDTARNEMKNFLEKDDEMASS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf