Gvermi4203.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi4203.t1 vs. uniprot
Match: A0A2V3J1A4_9FLOR (Putative DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1A4_9FLOR) HSP 1 Score: 209 bits (533), Expect = 7.240e-68 Identity = 112/133 (84.21%), Postives = 118/133 (88.72%), Query Frame = 0
Query: 1 MDEDDGDNHMQDYNDDVPEENDYEEDNVDNTREPETVPSKNAPLNATPAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVIGDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELNIPSMGSAP 133
M++DDGDN MQDYN DVPE DY +DN+DN EPET AP +A AEEKITTKFLTKYERARILGTRALQLSMGAPPMVEV+GDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELNIPSMGSAP
Sbjct: 1 MEDDDGDNRMQDYN-DVPE--DYADDNIDNAAEPETGDGGQAPKDAIQAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVMGDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELNIPSMGSAP 130
BLAST of Gvermi4203.t1 vs. uniprot
Match: R7QAB3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAB3_CHOCR) HSP 1 Score: 145 bits (367), Expect = 1.410e-42 Identity = 86/134 (64.18%), Postives = 95/134 (70.90%), Query Frame = 0
Query: 1 MDEDDGDNHMQDYNDDVPEENDYEEDNVDNTREPETVPSKNAPLNATPAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVI-GDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELNIPSMGSAP 133
M +DDGD MQDY D+V ND E N +E+ITT+ LTKYERARILGTRALQLSMGAPPMVE+ G+TDPLVIAKRELQEKKIPITIRRFLPDG+YEDW L +L IPSMG AP
Sbjct: 1 MADDDGDGGMQDYRDEV---NDMPEGNDGIDAMXXXXXXXXXXXXXXXEKERITTRTLTKYERARILGTRALQLSMGAPPMVEIQPGETDPLVIAKRELQEKKIPITIRRFLPDGSYEDWPLDDLTIPSMGQAP 131
BLAST of Gvermi4203.t1 vs. uniprot
Match: UPI001E1D4A41 (DNA-directed RNA polymerases I, II, and III subunit RPABC2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4A41) HSP 1 Score: 130 bits (326), Expect = 4.330e-36 Identity = 70/116 (60.34%), Postives = 84/116 (72.41%), Query Frame = 0
Query: 16 DVPEENDYEEDNVDNTREPETVPSKNAPLNA-------TPAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVIGDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQEL 124
D P+E+ +E N D+ E + + A A P E+ITT FLTKYERARILGTRALQ+SMGAPPMV V G++DPL+IA +EL EKKIPITIRR+LPDG+YEDWTL EL
Sbjct: 32 DAPDEDFEDEGNADDAVEAQGGEEEGASRVAGAAGGRGVPRSERITTHFLTKYERARILGTRALQISMGAPPMVNVTGESDPLMIAHKELMEKKIPITIRRYLPDGSYEDWTLPEL 147
BLAST of Gvermi4203.t1 vs. uniprot
Match: A0A7S0BD28_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BD28_9RHOD) HSP 1 Score: 126 bits (317), Expect = 8.410e-35 Identity = 67/108 (62.04%), Postives = 84/108 (77.78%), Query Frame = 0
Query: 19 EENDYEEDNVDNTREPETVPSKNAPLNATPAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVIGDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELNI 126
EE D EE+N D S+N A P EE+ TTK++TKYERARILGTRALQ+SMGAP +VE+ G+TDPLVIA++EL+EKKIPIT+RR+LPDG+YEDW + +L I
Sbjct: 49 EEGDGEEENDD---------SEN---RAVPREERTTTKYMTKYERARILGTRALQISMGAPILVELEGETDPLVIAQKELREKKIPITVRRYLPDGSYEDWNVDDLII 144
BLAST of Gvermi4203.t1 vs. uniprot
Match: A0A1X6P0J5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0J5_PORUM) HSP 1 Score: 125 bits (313), Expect = 1.940e-34 Identity = 61/103 (59.22%), Postives = 83/103 (80.58%), Query Frame = 0
Query: 25 EDNVDNTREPETVPSKNAPLNAT-PAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVIGDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELNI 126
+DNVD+ EPE ++ + T P ++IT +++TKYERAR+LGTRALQ+SMGAP MVE++G+TDPL+IA +EL++KKIPITIRR+LPDG++EDW EL I
Sbjct: 23 DDNVDDAPEPEGGEARASGSTYTQPNVKRITARYMTKYERARVLGTRALQISMGAPVMVELVGETDPLMIAHKELRQKKIPITIRRYLPDGSFEDWNCSELTI 125
BLAST of Gvermi4203.t1 vs. uniprot
Match: A0A7S4B2A3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B2A3_CHRCT) HSP 1 Score: 125 bits (314), Expect = 4.410e-34 Identity = 58/82 (70.73%), Postives = 72/82 (87.80%), Query Frame = 0
Query: 46 ATPAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVIGDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELNIP 127
ATPA E+ITT ++TK+ERARILGTRALQ+SM AP MVE+ G+TDPL IA +EL+++KIPIT+RRFLPDG+YEDW + EL IP
Sbjct: 60 ATPASERITTPYMTKFERARILGTRALQISMNAPVMVELEGETDPLAIAAKELRKRKIPITVRRFLPDGSYEDWNVDELIIP 141
BLAST of Gvermi4203.t1 vs. uniprot
Match: A0A7E4ZZD5_PANRE (RPB6 homolog n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4ZZD5_PANRE) HSP 1 Score: 122 bits (306), Expect = 2.370e-33 Identity = 56/84 (66.67%), Postives = 72/84 (85.71%), Query Frame = 0
Query: 43 PLNATPAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVIGDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELNI 126
P PAE ++TT F+TKYERARILGTRALQ++MGAP MVE+ G+TDPL IA++EL+E+KIPI IRR+LPDG++EDW + EL+I
Sbjct: 42 PGQQVPAENRVTTPFMTKYERARILGTRALQIAMGAPVMVELEGETDPLEIARKELKEQKIPIIIRRYLPDGSFEDWEIDELHI 125
BLAST of Gvermi4203.t1 vs. uniprot
Match: D8LZ20_BLAHO (Uncharacterized protein n=2 Tax=Blastocystis TaxID=12967 RepID=D8LZ20_BLAHO) HSP 1 Score: 117 bits (294), Expect = 4.080e-32 Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0
Query: 47 TPAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVIGDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELN 125
TP E++TT +LTKYERARILGTRALQLSM APPMVEV G TD L IA EL++KKIP+ IRRFLP G +EDW L ELN
Sbjct: 2 TPISERVTTPYLTKYERARILGTRALQLSMNAPPMVEVNGQTDTLQIALEELRQKKIPLIIRRFLPSGKFEDWRLDELN 80
BLAST of Gvermi4203.t1 vs. uniprot
Match: A0A183UQG1_TOXCA (RPB6 homolog n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183UQG1_TOXCA) HSP 1 Score: 117 bits (293), Expect = 6.880e-32 Identity = 52/80 (65.00%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 47 TPAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVIGDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELNI 126
T + +++TT F+TKYERARILGTRALQ++MGAP MVE+ G+TDPL IA++EL+++KIPI IRR+LPDG++EDW + ELN+
Sbjct: 6 TASTDRVTTPFMTKYERARILGTRALQIAMGAPVMVELEGETDPLEIARKELKDRKIPIIIRRYLPDGSFEDWGVDELNV 85
BLAST of Gvermi4203.t1 vs. uniprot
Match: A0A1I8CM57_9BILA (RPB6 homolog n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8CM57_9BILA) HSP 1 Score: 118 bits (295), Expect = 1.140e-31 Identity = 55/80 (68.75%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 47 TPAEEKITTKFLTKYERARILGTRALQLSMGAPPMVEVIGDTDPLVIAKRELQEKKIPITIRRFLPDGTYEDWTLQELNI 126
T + EKITT F+TKYERARILGTRALQ+++GAP MVE+ G+TDPL IA++EL+E+KIPI IRR+LPDG++EDW + EL+I
Sbjct: 47 TASTEKITTPFMTKYERARILGTRALQIALGAPVMVELEGETDPLEIARKELKEQKIPIIIRRYLPDGSFEDWGVDELHI 126 The following BLAST results are available for this feature:
BLAST of Gvermi4203.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi4203.t1 ID=Gvermi4203.t1|Name=Gvermi4203.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=134bpback to top |