Gvermi3353.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi3353.t1
Unique NameGvermi3353.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length265
Homology
BLAST of Gvermi3353.t1 vs. uniprot
Match: A0A2V3IYJ8_9FLOR (Alpha-protein kinase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYJ8_9FLOR)

HSP 1 Score: 365 bits (938), Expect = 9.780e-123
Identity = 172/242 (71.07%), Postives = 210/242 (86.78%), Query Frame = 0
Query:    1 MDSSGTIRRMSSSDIIPAFEDPPSAHSQKDIIADGYRMITRTLREPLFELYCEAELDSSQFIVQFDVFPFSAGGQRLAFEGRMLERLENGRLKSHMPVVVKLQMATGAYLCRTMSERTRVCEVEADNTVRKHEITSSILEKWCSLGTNKQVDILPAIKLVVTRECTLGNIPQEKFPVLHHLFKKLSLDAVLYNGAIGTVEEYLDGKFTKFLNNDGEHNHQVRANFPAAFAHWSWVDSGGTIM 242
            M+ S ++  +SSSD+ PAFEDPPSAH QK+II DGYRMITRTL+EPLFELYCEAEL+S Q++VQF+VFPFSAGGQRLAF+GRMLER++ G LKS +PVVVKLQMAT  +L  +++ERTR+C++EA+NTVRKH+ITS++LEKW  LGTNK V +L A K+++TR C + +I Q +F VLHHLFKKLSLDAVLY GA+GTVEEYL+G+FTKFLNNDG HN  VRANFPAAFAHWSWV+SGG +M
Sbjct:    1 MEPSESVHELSSSDVNPAFEDPPSAHLQKEIINDGYRMITRTLQEPLFELYCEAELESPQYVVQFEVFPFSAGGQRLAFQGRMLERMDGGTLKSILPVVVKLQMATTDFLSYSLAERTRICDLEANNTVRKHDITSNLLEKWYKLGTNKSVQVLSAEKVILTRGCAVDHISQHRFAVLHHLFKKLSLDAVLYQGAVGTVEEYLEGRFTKFLNNDGGHNSMVRANFPAAFAHWSWVNSGGLLM 242          
BLAST of Gvermi3353.t1 vs. uniprot
Match: R7QV13_CHOCR (Alpha-type protein kinase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QV13_CHOCR)

HSP 1 Score: 252 bits (643), Expect = 3.250e-78
Identity = 121/224 (54.02%), Postives = 161/224 (71.88%), Query Frame = 0
Query:   19 FEDPPSAHSQKDIIADGYRMITRTLREPLFELYCEAELDSSQFIVQFDVFPFSAGGQRLAFEGRMLERLENGRLKSHMPVVVKLQMATGAYLCRTMSERTRVCEVEADNTVRKHEITSSILEKWCSLGTNKQVDILPAIKLVVTRECTLGNIPQEKFPVLHHLFKKLSLDAVLYNGAIGTVEEYLDGKFTKFLNNDGEHNHQVRANFPAAFAHWSWVDSGGTIM 242
            F  PP++ +Q +II DGY +I   LREPL EL+C A++    F++ FDVFPFSAG QRLAF+G + ER+ +G     +  +VK++MA    +    +ERTR+   EA  TVRKH++T   +EKWC+LG NK V +L   K+ +TR C+L NI + +FP+LH LFKKLSLDAVLY  A+GTVE+YL G+FTKFLNNDG  N++V ANFPAAF+HWSWV+S G +M
Sbjct:    8 FALPPTSCAQGEIIRDGYNLIVDVLREPLRELHCAADITPQYFVI-FDVFPFSAGAQRLAFKGSIYERVASGDPVFCVHAIVKMEMAIPEVVETMETERTRINATEAQKTVRKHDVTRQYIEKWCALGINKSVHVLSTEKVTITRGCSLQNIDRRRFPILHQLFKKLSLDAVLYKNAVGTVEDYLPGRFTKFLNNDGMANNEVSANFPAAFSHWSWVESKGALM 230          
The following BLAST results are available for this feature:
BLAST of Gvermi3353.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYJ8_9FLOR9.780e-12371.07Alpha-protein kinase 1 n=1 Tax=Gracilariopsis chor... [more]
R7QV13_CHOCR3.250e-7854.02Alpha-type protein kinase domain-containing protei... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004166MHCK/EF2 kinasePFAMPF02816Alpha_kinasecoord: 73..242
e-value: 5.5E-10
score: 39.7
IPR004166MHCK/EF2 kinasePROSITEPS51158ALPHA_KINASEcoord: 43..264
score: 10.462711
NoneNo IPR availableGENE3D3.20.200.10MHCK/EF2 kinasecoord: 204..260
e-value: 8.3E-7
score: 31.0
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 58..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_41contigScGOVlb_41:1200215..1201103 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi3353.t1Gvermi3353.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_41 1200215..1201103 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi3353.t1 ID=Gvermi3353.t1|Name=Gvermi3353.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=265bp
MDSSGTIRRMSSSDIIPAFEDPPSAHSQKDIIADGYRMITRTLREPLFEL
YCEAELDSSQFIVQFDVFPFSAGGQRLAFEGRMLERLENGRLKSHMPVVV
KLQMATGAYLCRTMSERTRVCEVEADNTVRKHEITSSILEKWCSLGTNKQ
VDILPAIKLVVTRECTLGNIPQEKFPVLHHLFKKLSLDAVLYNGAIGTVE
EYLDGKFTKFLNNDGEHNHQVRANFPAAFAHWSWVDSGGTIMTWGSWGWR
NSSRSTGVTGCATT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004166MHCK_EF2_kinase
IPR011009Kinase-like_dom_sf