Gvermi3328.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi3328.t1
Unique NameGvermi3328.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length343
Homology
BLAST of Gvermi3328.t1 vs. uniprot
Match: A0A2V3IU92_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU92_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 1.450e-77
Identity = 142/329 (43.16%), Postives = 210/329 (63.83%), Query Frame = 0
Query:    6 TFRKVSTEWLDINDRKPGEGNPI-ENPEVCSFVAREHTTDLVTIPVAGSSESSTESGGQQETSSASLRLSPQGRFFPFLKYFSHRASMKETTGHDEGCKPGSAHCAESRIWFAKMTHEQIGTGQYIGIFALLSCRIIFFFILAISGGLVFGHRHEVDFVVLHSELFVWLHYWFFVLYPLMLWSSVLTLRTLNPEAVDPGL-IWTFTSALFHILATFAQVELFRLLLLHYVPQLQPSDISRTTIYSLSSSFAAQRYIMFIATLVEFYFSTIPFLIEHVIVIVIISGIWETASIFIKDIRPLWISIVLSIVIFSLATIQALINLLIANRLR 332
            TFRK+ TEWLD+ND K  + + I E PE  +   RE T DL TI V  S E+S+   GQ   + +    +P         +FS +  +K+   ++ G K      ++ R+WF ++T+ QIGTG+Y+G   LL  RI F F+ AIS G+++GHR +VD ++L SELF WL + F +LYPL+LW+S+LT R+LN E   P   +WTF + +FH L TF+QVELFRL L H+VP+LQP   S   +YSL S FA QRY+MF   L+EFY S +P+  E+++V V+++G+WE  ++F +++ P  + I++SI + +L  I A +N LIA++ R
Sbjct:    5 TFRKLPTEWLDVNDNKQVQESTINEFPEFRATSKRELTVDLETISVEESKENSSTPEGQGVPTDSQ---NPASNKATRTSFFSLKRMLKQEA-NENGGKTDMDCSSKERLWFERLTYRQIGTGRYLGNVGLLFVRIFFLFMHAISAGIMYGHRRQVDMLLLRSELFAWLQFVFVLLYPLLLWASLLTSRSLNSEDDAPKQRLWTFVAVVFHTLVTFSQVELFRLFLFHFVPRLQPKSSSTAILYSLDSVFARQRYLMFATVLIEFYCSQVPYYPEYLLVTVLLAGVWEIGTLFTRNLDPFSVRIIISIALLALVCILASLNYLIADKFR 329          
The following BLAST results are available for this feature:
BLAST of Gvermi3328.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IU92_9FLOR1.450e-7743.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 245..269
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 193..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 276..297
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..225
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 226..244
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 303..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 328..342
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 270..275
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 298..302
NoneNo IPR availableTMHMMTMhelixcoord: 129..151
NoneNo IPR availableTMHMMTMhelixcoord: 303..325
NoneNo IPR availableTMHMMTMhelixcoord: 203..225
NoneNo IPR availableTMHMMTMhelixcoord: 268..290
NoneNo IPR availableTMHMMTMhelixcoord: 171..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_41contigScGOVlb_41:1131881..1132909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi3328.t1Gvermi3328.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_41 1131881..1132909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi3328.t1 ID=Gvermi3328.t1|Name=Gvermi3328.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=343bp
MTSCGTFRKVSTEWLDINDRKPGEGNPIENPEVCSFVAREHTTDLVTIPV
AGSSESSTESGGQQETSSASLRLSPQGRFFPFLKYFSHRASMKETTGHDE
GCKPGSAHCAESRIWFAKMTHEQIGTGQYIGIFALLSCRIIFFFILAISG
GLVFGHRHEVDFVVLHSELFVWLHYWFFVLYPLMLWSSVLTLRTLNPEAV
DPGLIWTFTSALFHILATFAQVELFRLLLLHYVPQLQPSDISRTTIYSLS
SSFAAQRYIMFIATLVEFYFSTIPFLIEHVIVIVIISGIWETASIFIKDI
RPLWISIVLSIVIFSLATIQALINLLIANRLRGHSTKNSGLH*
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