Gvermi303.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi303.t1
Unique NameGvermi303.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length84
Homology
BLAST of Gvermi303.t1 vs. uniprot
Match: A0A2V3IZ26_9FLOR (Sodium/hydrogen exchanger 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ26_9FLOR)

HSP 1 Score: 152 bits (385), Expect = 3.270e-41
Identity = 76/83 (91.57%), Postives = 79/83 (95.18%), Query Frame = 0
Query:    1 MCFRNKWLGWKEAFVVGFSGLRGAVSLILALEVAGSQNLPEGVKSRVVLWTTGIVALSLLVNGFLVKPLIHGLKLDRAEKSRE 83
            M FRNKWLGW+EAFVVGFSGLRGAVSLILALEVAGS  LPEGVKSRVVLWTTGIVALSLLVNGFL+KPLIH +KLDRAEKSRE
Sbjct:  418 MSFRNKWLGWREAFVVGFSGLRGAVSLILALEVAGSSVLPEGVKSRVVLWTTGIVALSLLVNGFLIKPLIHVMKLDRAEKSRE 500          
BLAST of Gvermi303.t1 vs. uniprot
Match: R7QS13_CHOCR (Na_H_Exchanger domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS13_CHOCR)

HSP 1 Score: 126 bits (316), Expect = 6.680e-32
Identity = 62/83 (74.70%), Postives = 69/83 (83.13%), Query Frame = 0
Query:    1 MCFRNKWLGWKEAFVVGFSGLRGAVSLILALEVAGSQNLPEGVKSRVVLWTTGIVALSLLVNGFLVKPLIHGLKLDRAEKSRE 83
            M   NKW  WKEA VVGFSGLRGAVSL+LALEVAG   + E +KSRVVLW TG+VALSLLVNGFL+KPLI  LKLD+A+KSRE
Sbjct:  357 MSVGNKWYRWKEAVVVGFSGLRGAVSLVLALEVAGKSEIDERIKSRVVLWATGVVALSLLVNGFLIKPLIKSLKLDKAKKSRE 439          
BLAST of Gvermi303.t1 vs. uniprot
Match: I7H0B3_NEOYE (Na+/H+ antiporter n=1 Tax=Neopyropia yezoensis TaxID=2788 RepID=I7H0B3_NEOYE)

HSP 1 Score: 102 bits (255), Expect = 1.160e-23
Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    1 MCFRNKWLGWKEAFVVGFSGLRGAVSLILALEVAGSQNLPEGVKSRVVLWTTGIVALSLLVNGFLVKPLIHGLKLDRAEKSR 82
            + +R KW  W++A VVG SGLRGAVSLILALEV  S+ +P+ V+SRVVLWTTG+VALSLLVNG  + P +  L L+RA+ ++
Sbjct:  401 LSWRQKWYTWRQAVVVGLSGLRGAVSLILALEVGESETIPDEVRSRVVLWTTGVVALSLLVNGLTISPALSLLGLNRADPAK 482          
BLAST of Gvermi303.t1 vs. uniprot
Match: A0A1X6PCR7_PORUM (Na_H_Exchanger domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PCR7_PORUM)

HSP 1 Score: 98.6 bits (244), Expect = 3.560e-22
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    1 MCFRNKWLGWKEAFVVGFSGLRGAVSLILALEVAGSQNLPEGVKSRVVLWTTGIVALSLLVNGFLVKPLIHGLKLDRAEKSR 82
            + +R KW  W++A VV  SGLRGAVSLILALEV  S+ +P+ V+SRVVLWTTG+VALSLLVNG  + P +  L L++ + ++
Sbjct:  431 LAWRQKWYTWRQAIVVSLSGLRGAVSLILALEVGESETVPDEVRSRVVLWTTGVVALSLLVNGLAISPALSWLGLNKPDPTK 512          
BLAST of Gvermi303.t1 vs. uniprot
Match: A0A5J4YN06_PORPP (Sodium/hydrogen exchanger 8 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN06_PORPP)

HSP 1 Score: 97.8 bits (242), Expect = 6.620e-22
Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    3 FRNKWLGWKEAFVVGFSGLRGAVSLILALEVAGSQNLPEGVKSRVVLWTTGIVALSLLVNGFLVKPLIHGLKLDRAEKSRE 83
            F+ +W  WK A VV FSGLRGA+SLILALEV  S  +   + +RVV+WT+G++ALSL +NG L+KPLIH L +D+ + +RE
Sbjct:  478 FKQRWWDWKNATVVAFSGLRGALSLILALEVGESPTVSSDISARVVVWTSGVIALSLALNGTLIKPLIHLLGMDKPDPTRE 558          
BLAST of Gvermi303.t1 vs. uniprot
Match: A0A7S3EGD0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EGD0_9RHOD)

HSP 1 Score: 93.2 bits (230), Expect = 2.400e-20
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 0
Query:    5 NKWLGWKEAFVVGFSGLRGAVSLILALEVAGSQNLPEGVKSRVVLWTTGIVALSLLVNGFLVKPLIHGLKLDRAEKSRE 83
            NKW G+KEA VV +SGLRGAV+LILALEV G+  LP  V+SRVV+W+  IVAL+L VNG  +  L+H L LD  +  +E
Sbjct:  395 NKWYGFKEAAVVSYSGLRGAVTLILALEVGGTGELPSSVRSRVVVWSASIVALTLFVNGSTISTLLHWLGLDVPDPVKE 473          
BLAST of Gvermi303.t1 vs. uniprot
Match: A0A7S3EFG2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFG2_9RHOD)

HSP 1 Score: 93.2 bits (230), Expect = 2.760e-20
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 0
Query:    5 NKWLGWKEAFVVGFSGLRGAVSLILALEVAGSQNLPEGVKSRVVLWTTGIVALSLLVNGFLVKPLIHGLKLDRAEKSRE 83
            NKW G+KEA VV +SGLRGAV+LILALEV G+  LP  V+SRVV+W+  IVAL+L VNG  +  L+H L LD  +  +E
Sbjct:  395 NKWYGFKEAAVVSYSGLRGAVTLILALEVGGTGELPSSVRSRVVVWSASIVALTLFVNGSTISTLLHWLGLDVPDPVKE 473          
BLAST of Gvermi303.t1 vs. uniprot
Match: A0A7S2ZZQ7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZQ7_9RHOD)

HSP 1 Score: 81.6 bits (200), Expect = 3.120e-16
Identity = 39/66 (59.09%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   18 FSGLRGAVSLILALEVAGSQNLPEGVKSRVVLWTTGIVALSLLVNGFLVKPLIHGLKLDRAEKSRE 83
            +SGLRGAV+LILALEV  +  LP  V+SRVV+W++ +VAL+L VNG  +K L+H LKLDRA+  +E
Sbjct:    2 YSGLRGAVTLILALEVGDTSELPSSVRSRVVVWSSALVALTLFVNGMTIKKLLHLLKLDRADPVKE 67          
BLAST of Gvermi303.t1 vs. uniprot
Match: A0A7S1TIL2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIL2_9RHOD)

HSP 1 Score: 72.8 bits (177), Expect = 4.060e-13
Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    5 NKWLGWKEAFVVGFSGLRGAVSLILALEVAGSQNLPEGVKSRVVLWTTGIVALSLLVNGFLVKPLIHGLKLDRAEK 80
            ++W  WKEA V   +GLRGAVSLILAL+VA   ++   + +RVV+WT  IV L+L VNG L+ PL+  LKL +  K
Sbjct:  161 HQWFSWKEAVVTSLAGLRGAVSLILALKVA-LGDVSNEISARVVVWTCIIVFLTLSVNGILITPLLKLLKLGQRSK 235          
BLAST of Gvermi303.t1 vs. uniprot
Match: W7TNK5_9STRA (Sodium hydrogen exchanger 8 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNK5_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.150e-10
Identity = 28/76 (36.84%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    8 LGWKEAFVVGFSGLRGAVSLILALEVAGSQNLPEGVKSRVVLWTTGIVALSLLVNGFLVKPLIHGLKLDRAEKSRE 83
            + W++A ++ + GLRGAVSL LAL V+  + +PE  ++ ++ +T GIV L++L+NG   K ++  LKL+   +  +
Sbjct:  367 INWRQAVLLSYGGLRGAVSLTLALVVSQEEGIPEETRALILFFTAGIVLLTILINGSTCKLVLQKLKLNNPTRVEQ 442          
The following BLAST results are available for this feature:
BLAST of Gvermi303.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ26_9FLOR3.270e-4191.57Sodium/hydrogen exchanger 7 n=1 Tax=Gracilariopsis... [more]
R7QS13_CHOCR6.680e-3274.70Na_H_Exchanger domain-containing protein n=1 Tax=C... [more]
I7H0B3_NEOYE1.160e-2359.76Na+/H+ antiporter n=1 Tax=Neopyropia yezoensis Tax... [more]
A0A1X6PCR7_PORUM3.560e-2256.10Na_H_Exchanger domain-containing protein n=1 Tax=P... [more]
A0A5J4YN06_PORPP6.620e-2255.56Sodium/hydrogen exchanger 8 n=1 Tax=Porphyridium p... [more]
A0A7S3EGD0_9RHOD2.400e-2058.23Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S3EFG2_9RHOD2.760e-2058.23Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S2ZZQ7_9RHOD3.120e-1659.09Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TIL2_9RHOD4.060e-1351.32Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
W7TNK5_9STRA7.150e-1036.84Sodium hydrogen exchanger 8 n=1 Tax=Nannochloropsi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006153Cation/H+ exchangerPFAMPF00999Na_H_Exchangercoord: 7..70
e-value: 4.9E-8
score: 32.2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..70
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_14386contigScGOVlb_14386:1..250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi303.t1Gvermi303.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_14386 1..250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi303.t1 ID=Gvermi303.t1|Name=Gvermi303.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=84bp
MCFRNKWLGWKEAFVVGFSGLRGAVSLILALEVAGSQNLPEGVKSRVVLW
TTGIVALSLLVNGFLVKPLIHGLKLDRAEKSREX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006153Cation/H_exchanger