Gvermi1875.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi1875.t1 vs. uniprot
Match: A0A2V3ISA4_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISA4_9FLOR) HSP 1 Score: 117 bits (294), Expect = 4.310e-28 Identity = 68/202 (33.66%), Postives = 111/202 (54.95%), Query Frame = 0
Query: 104 AQLRAKVDAAMAVTRGSKCNPNVCFVMDGSARLSDDDFRQQKDFVKLVAAIVAFDEGAGLAAVSYSRRVTRLAALTSDADSFLLRMESACRQCPCSMRPLVGSGIRMCDRELKKASG-AKKMVVFGDDQNTTTRR--------VAKRFLAQEGTGLCTVQVGGTTAA-----DGGESDVLTIDSWSEIVDILEELVRALCDA 291
A RA++D A+ + + C PN+CF +DGS+ ++DD+F+ Q DFV L+ +V+ DE +G +A+ Y R ++ T DA +FLL++E RQ S+R + GI C R+ ++ G A K+++ GD ++T R +A +FLA+ +C V V T G V ++ W +VD+L +LV +C A
Sbjct: 36 AANRAQIDRALEIVEETGCEPNLCFAIDGSSSITDDEFQLQLDFVALITGLVSLDEQSGYSAIQYGLRPKFMSRFTQDAAAFLLKVEGT-RQLR-SVRTFIAPGIGGCMRQFRRVRGQANKIILLGDGRSTFDSRDPPLDPPSIAAQFLAEPNNSICAVGVSFDTTELLEEITGDPDRVFSVADWMSVVDVLADLVEQVCGA 235
BLAST of Gvermi1875.t1 vs. uniprot
Match: A0A2V3IQR5_9FLOR (Collagen alpha-5(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR5_9FLOR) HSP 1 Score: 100 bits (250), Expect = 1.150e-21 Identity = 64/197 (32.49%), Postives = 100/197 (50.76%), Query Frame = 0
Query: 108 AKVDAAMAVTRGSKCNPNVCFVMDGSARLSDDDFRQQKDFVKLVAAIVAFDEGAGLAAVSYSRRVTRLAALTSDADSFLLRMESACRQCPCSMRPLVGSGIRMCDRELKKASGAKK-MVVFGDDQNTTTRR--------VAKRFLAQEGTGLCTVQVGGT------TAADGGESDVLTIDSWSEIVDILEELVRALC 289
A+V A+ + ++C+PN+CF +DGS + +F+ +KDF LVAA+VA+DE A AAV Y R ++ LT DAD+FL + + + R + G+ C R+ G K +V+ GD ++ + +A+ FLA + V VG T GGE +V + W E+ +L ELV +C
Sbjct: 43 AEVQLALQIAEKTRCDPNICFAVDGSGSMDVTEFQLEKDFTNLVAAVVAYDEQARFAAVQYGLRPKFISRLTEDADAFLEAVHYT--ESLNAPRTFIAPGLAGCIRQFYYLKGEPKHIVLLGDGRSNFDSKLPPLDPVSIAQAFLANPNNTISAVGVGFDADDTMLTNIAGGEENVFNVGQWLEVTTVLAELVGEVC 237 The following BLAST results are available for this feature:
BLAST of Gvermi1875.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi1875.t1 ID=Gvermi1875.t1|Name=Gvermi1875.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=296bpback to top |