Gvermi13342.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13342.t1
Unique NameGvermi13342.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length304
Homology
BLAST of Gvermi13342.t1 vs. uniprot
Match: A0A2R5G8Y4_9STRA (Disease resistance protein TAO1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8Y4_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.990e-36
Identity = 81/189 (42.86%), Postives = 118/189 (62.43%), Query Frame = 0
Query:  118 NLPSEAASRVSAFLVKLNRVKELALSETRLAVAKRIMEVVALLYEPAY-RDEVIHGMVEFMDICLDQPVWVLDQLFLVRAKVQARGDRLAQKELGRRVLRLEIVHEHVAEKLASLTWVDSVSVYFRFERELRDRLDLPVSDISTTFWEHIDVRDEELEAASDAALAVTDEDLVTWLEKWPEW---VRHE 302
            +LP      + +FL KL    E   S  +  +AKR++  + LL E AY R+EV+  + + +D C D+P+W L+Q+ L+     ARGDR A + LGR V+RLEIVHEHV  K+AS+  VD V VY RFE +LR+ LDLPV+ +   F + I++  EE++AA   AL++ + +   WL+ WPEW   +RHE
Sbjct:  724 HLPESYERTLLSFLSKLRWSAEFRRSAFQEGLAKRVVSALGLLQEDAYSREEVLTRISDSVDACADKPIWALNQITLIAKLAHARGDREAIRALGRSVMRLEIVHEHVQRKIASIDIVDDVCVYLRFEVDLREDLDLPVAALDMLFPKFIEISSEEIDAARTEALSIGEAEFEIWLDAWPEWQRQLRHE 912          
BLAST of Gvermi13342.t1 vs. uniprot
Match: A0A2R5H1J0_9STRA (Leucine-rich repeat containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H1J0_9STRA)

HSP 1 Score: 142 bits (357), Expect = 4.140e-34
Identity = 82/188 (43.62%), Postives = 115/188 (61.17%), Query Frame = 0
Query:  119 LPSEAASRVSAFLVKLNRVKELAL-SETRLAVAKRIMEVVALLYEPA---YRDEVIHGMVEFMDICLDQPVWVLDQLFLVRAKVQARGDRLAQKELGRRVLRLEIVHEHVAEKLASLTWVDSVSVYFRFERELRDRLDLPVSDISTTFWEHIDVRDEELEAASDAALAVTDEDLVTWLEKWPEWVRHE 302
            +PS  A  V  FL  L   KE +L + TR  + +R+ EV  LL        R+ +   M +  D C D+P+W L+Q+       +ARG+R A ++LGRR++RLEIVHEHV E +  LT+VD V VY RFE +LR+RLDLPVS     F  ++ + DE +EAA++AAL V++ED   WL+ W EW R +
Sbjct:  975 VPSAYAHGVKEFLRMLFYSKEFSLQTTTRPGLLRRVYEVFDLLVSSTDQDVREGLCIRMADSGDACGDKPIWALNQMKQTVLVAEARGERQALRDLGRRLMRLEIVHEHVRELIGQLTFVDDVCVYLRFEIDLRERLDLPVSAEDMLFPNYVSIPDEAIEAAAEAALNVSEEDFEAWLQNWEEWQRQD 1162          
BLAST of Gvermi13342.t1 vs. uniprot
Match: A0A2R5GHV3_9STRA (Disease resistance protein RPP5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHV3_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.050e-33
Identity = 93/283 (32.86%), Postives = 144/283 (50.88%), Query Frame = 0
Query:   30 DSRKVFIHGSGLSVESREWLECYNDSQLIFDNDPEPDGEEENSDXXXXXXXXXXXXDDEAMPKSELEVCNEAILSWAAQAGT---------LGLEELNLPSEAASR--VSAFLVKLNRVKELALSETRLAVAKRIMEVVALLY-EPAYRDEVIHGMVEFMDICLDQPVWVLDQLFLVRAKVQARGDRLAQKELGRRVLRLEIVHEHVAEKLASLTWVDSVSVYFRFERELRDRLDLPVSDISTTFWEHIDVRDEELEAASDAALAVTDEDLVTWLEKWPEWVR 300
            +  +V++  SGL V + EWL       L F                          ++E +     E   +A+  W+  A              E++N   + AS+  V  FL +L   KE  L+E R  +A R++EV+ +L  +   R+EVI  MV+  D C D+P+W L+Q+ L+    +ARG     + L RRV+ L++VHEH   K  SL +VD V VY RFE  L + LDLPVS ++  F + ++++D E++AA   ALA+++E +  +LE WPEW R
Sbjct:  479 EPHEVYLGSSGLGVSALEWLRNVEAPFLRF-----------------HVSLRANRQNEETVDVPPFESFAQAVAFWSTYAADEHGDPVSPDFTAEDVNDVVDDASKRGVLVFLSRLRGAKEFLLAEMRPRLAMRVLEVLGILVSDEVAREEVILRMVDSTDACDDKPIWALNQMQLLVETARARGSESRLRALARRVMNLQVVHEHAMAKCNSLGFVDDVCVYLRFEIALLEDLDLPVSALAMHFPKFMEIKDREIDAARQQALAISEEQVDAFLETWPEWQR 744          
BLAST of Gvermi13342.t1 vs. uniprot
Match: A0A2R5G0Q0_9STRA (Disease resistance protein TAO1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0Q0_9STRA)

HSP 1 Score: 133 bits (334), Expect = 4.500e-31
Identity = 83/205 (40.49%), Postives = 114/205 (55.61%), Query Frame = 0
Query:  100 EAILSWAAQAGTLGLEELNLPSEAASR-VSAFLVKLNRVKELALSETRLAVAKRIMEVVALLYEPAY-RDEVIHGMVEFMDICLDQPVWVLDQLFLVRAKVQARGDRLAQKELGRRVLRLEIVHEHVAEKLASLTWVDSVSVYFRFERELRDRLDLPVSDISTTFWEHIDVRDEELEAASDAALAVTD--EDLVTWLEKWPEWVR 300
            +A+  WA  AG    +     + A  R V AFL KL   KE      + A+A+R++E   ++    Y R+EV+  M + +D C D+PVW L+Q+ L+ A  +ARGDR A + +GR  +RLE+VHEH A K+AS    D   VY RFE  L+D L+LPVS     +  H  V   EL AA + AL V D  +   +WL  WPEW R
Sbjct:  770 KALRYWAHLAGGEAPDVEGCVAAAHERGVLAFLSKLRASKEFKSEHLQPALAQRVVEAFDIVANDEYAREEVLERMGDAVDACGDKPVWALNQINLIAAIARARGDRAALRRVGRGTMRLEVVHEHCARKVASFKAADETCVYLRFETALKDVLELPVSSCDMLYSSHARVSAAELAAAREEALKVVDGTKAFESWLRAWPEWQR 974          
BLAST of Gvermi13342.t1 vs. uniprot
Match: A0A2R5GF25_9STRA (Tubulin delta chain n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GF25_9STRA)

HSP 1 Score: 127 bits (320), Expect = 3.310e-29
Identity = 68/151 (45.03%), Postives = 91/151 (60.26%), Query Frame = 0
Query:  151 KRIMEVVALLYEPAYRDEVIHGMVEFMDICLDQPVWVLDQLFLVRAKVQARGDRLAQKELGRRVLRLEIVHEHVAEKLASLTW-VDSVSVYFRFERELRDRLDLPVSDISTTFWEHIDVRDEELEAASDAALAVTDEDLVTWLEKWPEWVR 300
            K I+E +  + +P  RDE++  M++  D C D+P+W L Q+ LV A   ARGDR   +ELGR ++RL IVHEHV   + SL   VD V VY RFE  LR+ L LPVS     +  H+ V D +++ A  AALA+ +E    WL  WPEW R
Sbjct:  595 KEILETI--IADPISRDEIVIRMLDATDACADKPIWALGQMQLVVAISHARGDRAKLRELGRSIMRLNIVHEHVESYINSLNRAVDDVCVYLRFEIALREPLGLPVSSKEMLYANHVQVSDADIDKAKKAALAIPEEKFEAWLAAWPEWQR 743          
BLAST of Gvermi13342.t1 vs. uniprot
Match: A0A2R5GS35_9STRA (Nephrocystin-3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GS35_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.520e-27
Identity = 63/153 (41.18%), Postives = 91/153 (59.48%), Query Frame = 0
Query:  151 KRIMEVVALLYEPAYRDEVIHGMVEFMDICLDQPVWVLDQLFLVRAKVQARGDRLAQKELGRRVLRLEIVHEHVAEKL-ASLTWVDSVSVYFRFERELRDRLDLPVSDISTTFWEHIDVRDEELEAASDAALAVTDEDLVTWLEKWPEWVRHE 302
            + ++E +A   +P  RDE++  M++  D C D+P+W L Q+ LV A   ARGDR   ++LGR ++RL IVHEHV   +      VD V VY RFE +LR+ LDLPVS  +  +  H+ +    + AA   ALA+T++    WL  WPEW R +
Sbjct: 1300 QEVLETIA--RDPIARDEIVLRMLDATDACADKPIWALGQMQLVAAVAHARGDRAKLRKLGRGIMRLNIVHEHVERFINGENRGVDDVCVYLRFEIDLRESLDLPVSSQAMIYSNHVPISAGMIAAAKREALAITEKQFEAWLATWPEWQRQD 1450          
BLAST of Gvermi13342.t1 vs. uniprot
Match: A0A2R5GTS1_9STRA (Importin subunit alpha n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTS1_9STRA)

HSP 1 Score: 120 bits (302), Expect = 7.670e-27
Identity = 70/181 (38.67%), Postives = 102/181 (56.35%), Query Frame = 0
Query:  127 VSAFLVKLNRVKELALSETRLAVAKRIMEVVALLYEPAY-RDEVIHGMVEFMDICLDQPVWVLDQLFLVRAKVQARGDRLAQKELGRRVLRLEIVHEHVAEKLASLT----WVDSVSVYFRFERELRDRLDLPVSDISTTFWEHIDVRDEELEAASDAALAVTDEDLVTWLEKWPEWVRHE 302
            V  FL KL   +E   +  +  +A+R+M+ +  L    + R+E+I  MV+ +D C D+P+W L+Q+ LV     ARG++   +++GR V+ L+IVHEHV   +         VD V VY RFE ELR+ LDLPVS     +  ++ +   +LEAA  A   V DE    WL  WPEW+R E
Sbjct:  789 VLVFLSKLRISQEFQNTSMQTGLARRVMDGLETLCSDEFAREEIIARMVDSVDTCGDKPIWALNQISLVSRVAHARGNKEELRKVGRGVMNLDIVHEHVRRVIDKFVKRNGGVDDVCVYLRFEIELREDLDLPVSAQDMIYSTYVQIDKADLEAARTACKEVDDEAFEVWLSAWPEWIREE 969          
BLAST of Gvermi13342.t1 vs. uniprot
Match: A0A2R5FZS7_9STRA (Ryanodine receptor 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZS7_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.160e-26
Identity = 75/196 (38.27%), Postives = 111/196 (56.63%), Query Frame = 0
Query:  127 VSAFLVKLNRVKELALSETRLAVAKRIMEVV-ALLYEPAYRDEVIHGMVEFMDICLDQPVWVLDQLFLVRAKVQARGDRLAQKELGRRVLRLEIVHEHVAEKLASL---------------------TWVDSVSVYFRFERELRDRLDLPVSDISTTFWEHIDVRDEELEAASDAALAVTDEDLVTWLEKWPEWVR 300
            V+ FL KL   KE   +  R  +A+R++EV+ A++ E   RD ++  + + +D C D+P+W L+Q+  V A  +ARGDR A +ELG+ ++RL +VHEH   K+ +L                     + VD + VY  FE ELR+RL L V+  S  F   I +  EEL+AA++ ALAV++E    WL  WPEW R
Sbjct: 1152 VTQFLSKLRMAKEFQEAGLRQGLARRVVEVLRAVVDEVDARDSLLVRISDSVDACGDKPIWALNQMQAVIATARARGDRQALRELGQSMMRLGVVHEHARRKVLALERDKQAERERRGSSGSSLSEESEVDEICVYLFFEIELRERLGLTVAAESMLFPNFIPISAEELDAAANEALAVSEEAFDQWLASWPEWQR 1347          
BLAST of Gvermi13342.t1 vs. uniprot
Match: A0A7S2RJX0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RJX0_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.310e-16
Identity = 64/206 (31.07%), Postives = 102/206 (49.51%), Query Frame = 0
Query:  111 TLGLEELNLPSEAASRVSAFLVKLNRVKELALSETRLAVAKRIMEVVALLYEP-AYRDEVIHGMVEFMDICLDQPVWVLDQLFLVRAKVQARGDRLAQKELGRRVLRLEIVHEHVA----EKLASLTW---------VDSVSVYFRFERELRDRLDLPVSDISTTFWEHIDVRDEELEAASDAALAVTDEDLVTWLEKWPEWVRHE 302
            T  L +  +P      ++ FL  L   +E     T  ++  RI+ +  +L +P     E++  + + +D C D+P+  L+++  +   V+ARGD    +ELG+R++RLEIVH++ A    E+LA   +         VD VSVY  FE  LR  LDLP+   + ++ +   +    LE A    LAV D     WL  W EW R +
Sbjct:   72 TEALVQRVVPLAYVGCMTTFLRILGESEETNDERTIYSLTNRIVSMFKILSDPEGSHVEILTEVEDSLDSCHDKPILALNRIGTLVRIVEARGDPSKLRELGKRIMRLEIVHKYAALDIKERLADEIYDDDMVHETDVDEVSVYLTFETLLRPELDLPIDAEAISYMDTECILGSNLEKARVECLAVQDVAFENWLTSWSEWQREQ 277          
The following BLAST results are available for this feature:
BLAST of Gvermi13342.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2R5G8Y4_9STRA3.990e-3642.86Disease resistance protein TAO1 n=1 Tax=Hondaea fe... [more]
A0A2R5H1J0_9STRA4.140e-3443.62Leucine-rich repeat containing protein n=1 Tax=Hon... [more]
A0A2R5GHV3_9STRA3.050e-3332.86Disease resistance protein RPP5 n=1 Tax=Hondaea fe... [more]
A0A2R5G0Q0_9STRA4.500e-3140.49Disease resistance protein TAO1 n=1 Tax=Hondaea fe... [more]
A0A2R5GF25_9STRA3.310e-2945.03Tubulin delta chain n=1 Tax=Hondaea fermentalgiana... [more]
A0A2R5GS35_9STRA2.520e-2741.18Nephrocystin-3 n=1 Tax=Hondaea fermentalgiana TaxI... [more]
A0A2R5GTS1_9STRA7.670e-2738.67Importin subunit alpha n=1 Tax=Hondaea fermentalgi... [more]
A0A2R5FZS7_9STRA2.160e-2638.27Ryanodine receptor 1 n=1 Tax=Hondaea fermentalgian... [more]
A0A7S2RJX0_9STRA3.310e-1631.07Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029487Novel E3 ligase domainPFAMPF14496NELcoord: 125..300
e-value: 3.6E-13
score: 49.5
NoneNo IPR availableGENE3D1.20.58.360Shigella T3SS effector IpaH definescoord: 178..302
e-value: 1.4E-14
score: 56.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3351contigScGOVlb_3351:10896..11807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13342.t1Gvermi13342.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3351 10896..11807 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13342.t1 ID=Gvermi13342.t1|Name=Gvermi13342.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=304bp
MIVGGYLDVSNCVNLNSLPAVILCWPQIPDSRKVFIHGSGLSVESREWLE
CYNDSQLIFDNDPEPDGEEENSDKSSSETSDSDTTDDEAMPKSELEVCNE
AILSWAAQAGTLGLEELNLPSEAASRVSAFLVKLNRVKELALSETRLAVA
KRIMEVVALLYEPAYRDEVIHGMVEFMDICLDQPVWVLDQLFLVRAKVQA
RGDRLAQKELGRRVLRLEIVHEHVAEKLASLTWVDSVSVYFRFERELRDR
LDLPVSDISTTFWEHIDVRDEELEAASDAALAVTDEDLVTWLEKWPEWVR
HEY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029487NEL_dom