Gvermi13222.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13222.t1
Unique NameGvermi13222.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length137
Homology
BLAST of Gvermi13222.t1 vs. uniprot
Match: A0A1Z5KKW4_FISSO (Diphthine--ammonia ligase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKW4_FISSO)

HSP 1 Score: 109 bits (272), Expect = 4.340e-25
Identity = 64/138 (46.38%), Postives = 92/138 (66.67%), Query Frame = 0
Query:    5 ETWTEQLEQCWTNVARVLDAVDAASIKDVLSCLLYVADSVF--FELDALPKIATICKGQMECNGGVVPGAVDGIAQAAADTD-LDGYEDEETRREVEGEVAQD-DDKP--KCCPILVVSIPQIPVGALTEVEIVAASR 136
            E+W+ QL+Q W N+ARVLDA+DA S+  ++S L+Y +       + D L ++ +IC  Q++ NGGV+ GA+D I     + D  DGYEDEET RE+    +   DD+P  K  P+LVVS+P++PVGAL EVE++A SR
Sbjct:  487 ESWSLQLKQAWKNLARVLDALDATSLDHLMSGLVYCSSKAIQLSDPDTLIQLESICMEQLQSNGGVLSGAIDSINNNHQEVDPYDGYEDEETMREMTNTSSVVVDDRPGAKFLPLLVVSVPELPVGALAEVEVMALSR 624          
BLAST of Gvermi13222.t1 vs. uniprot
Match: A0A7S4ARS3_9STRA (Diphthine--ammonia ligase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ARS3_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.950e-25
Identity = 59/139 (42.45%), Postives = 94/139 (67.63%), Query Frame = 0
Query:    1 MKLRETWTEQLEQCWTNVARVLDAVDAASIKDVLSCLLYVADSVFFELDALPKIATICKGQMECNGGVVPGAVDGIAQAAADTDL-DGYEDEETRREVEG-EVAQDDDKPKC--CPILVVSIPQIPVGALTEVEIVAAS 135
            M L+ TW+ QLEQCW NVA VLDA++  S+KDV   L+Y++D ++ E ++L  + +I K Q+  NG ++ G +D +     +T+L  GYED+ T  E++  E  +++++  C  CPILVVSIP++P GAL EVE++ ++
Sbjct:  523 MALQPTWSLQLEQCWKNVASVLDALNGGSLKDVFGSLIYISDKIYPEENSLELLESISKNQIRSNGSILAGRIDSLLD---ETELFGGYEDQGTWEEMKTQEEKEEEEEAMCNPCPILVVSIPEMPKGALVEVEVITST 658          
BLAST of Gvermi13222.t1 vs. uniprot
Match: A0A1Z5JAT7_FISSO (Diphthine--ammonia ligase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAT7_FISSO)

HSP 1 Score: 104 bits (259), Expect = 2.500e-23
Identity = 59/138 (42.75%), Postives = 88/138 (63.77%), Query Frame = 0
Query:    5 ETWTEQLEQCWTNVARVLDAVDAASIKDVLSCLLYVADSVF--FELDALPKIATICKGQMECNGGVVPGAVDGIAQAAADTD-LDGYEDEETRREVEGE---VAQDDDKPKCCPILVVSIPQIPVGALTEVEIVAASR 136
            E+W+ QL+Q W N+ARVLDA+DA S+  ++S L+Y +       + + L ++ +IC  Q++ NGGV+ G +D I     + D  DGYEDEET RE+      +  D    K  P+LVVS+P++PVGAL EVE++A +R
Sbjct:  692 ESWSLQLKQAWKNLARVLDALDATSLDHLISGLVYCSSKAIQLSDPETLIQLESICMEQLQSNGGVLTGTIDSINNNHQEVDSYDGYEDEETMREMTNTSSLIVDDRRGAKFLPLLVVSVPELPVGALAEVEVMALAR 829          
BLAST of Gvermi13222.t1 vs. uniprot
Match: A0A448ZP43_9STRA (Diphthine--ammonia ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZP43_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.580e-22
Identity = 53/138 (38.41%), Postives = 90/138 (65.22%), Query Frame = 0
Query:    1 MKLRETWTEQLEQCWTNVARVLDAVDAASIKDVLSCLLYVADSVFFELDALPKIATICKGQMECNGGVVPGAVDGIAQAAADTDL-DGYEDEETRREVEGEVAQDDDKPKC--CPILVVSIPQIPVGALTEVEIVAAS 135
            M+L+ TWT QLEQCW NVA VLDA++  S+ D+   L+Y++D ++ E  +L  +  I + ++  NG ++ G +D +     +T+L  GYED+ T  E++ +  ++ ++     CPILVVSIP++P GA+ EVE++ ++
Sbjct:  499 MELQPTWTLQLEQCWKNVASVLDALNGGSLNDIFGSLVYLSDKIYPEEXSLELLEAISRHEIRTNGSIIAGRIDSLTD---ETELFGGYEDQGTWEEMKSQEEKEKEESMFNPCPILVVSIPEMPKGAVVEVEVITST 633          
BLAST of Gvermi13222.t1 vs. uniprot
Match: A0A7S1VFR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VFR5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.220e-16
Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 MKLRETWTEQLEQCWTNVARVLDAVDAASIKDVLSCLLYVADSVFFELDALPKIATICKGQMECNGGVVPGAVDGIA 77
            MKLR+TW EQLEQCWTN ARVLDA+D +++  +LSCL+YV      +++   +I  IC+ Q+  NGGV+ G +D  A
Sbjct:  132 MKLRDTWQEQLEQCWTNSARVLDALDGSALHSLLSCLVYVGK----DIEDWGRIEHICREQILGNGGVMAGVIDSTA 204          
BLAST of Gvermi13222.t1 vs. uniprot
Match: A0A7S2Y7F9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y7F9_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.000e-14
Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 0
Query:    4 RETWTEQLEQCWTNVARVLDAVDAAS-IKDVLSCLLYVADSVFFELDALPKIATICKGQMEC---NGGVVPGAVD-GIAQAAADTDLDGYEDEETRREVEG 99
            +  W  QL Q WTN+A+V+DA+D  S + ++LSCL+YV  S+  E      ++TI +   E    N  +VPGAVD G+     D D  GYEDEET REV G
Sbjct:   43 KNNWKPQLLQTWTNIAQVIDALDQGSLVNNLLSCLIYVQQSILLEQGQDTVVSTIQEMSHEAIQSNCRIVPGAVDKGVQNDGDDNDFGGYEDEETMREVLG 143          
BLAST of Gvermi13222.t1 vs. uniprot
Match: A0A7S2KWY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KWY5_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.380e-12
Identity = 58/153 (37.91%), Postives = 81/153 (52.94%), Query Frame = 0
Query:    5 ETWTEQLEQCWTNVARVLDAVDAASIKDVLSCLLYVADSVFFEL-----DA----LP--KIATICKGQMECNGGVVPGAVDGIAQA--AADTDLDGYEDEETRREVEGE----VAQDDD---KPK-CCPILVVSIPQIPVGALTEVEIVAASR 136
            E+   QL Q W N A VLDA   A++   L  L+YV   V         DA    LP  ++  I    +  NGG++ G  DG   +    + + DGYEDEET  E++ +    V  DDD   KPK   PIL V+IP++P+GAL+EVE+V  ++
Sbjct:  206 ESCKAQLRQAWRNAAAVLDAQSNATLDHCLGALVYVNSDVMMPSNDDNNDAPRQFLPWNEVEAISAEAIAQNGGILSGFADGQGSSNDGGEGEFDGYEDEETAMEMQKQRAAVVDMDDDDHSKPKFSIPILTVAIPEMPMGALSEVELVCVTQ 358          
The following BLAST results are available for this feature:
BLAST of Gvermi13222.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A1Z5KKW4_FISSO4.340e-2546.38Diphthine--ammonia ligase n=1 Tax=Fistulifera sola... [more]
A0A7S4ARS3_9STRA5.950e-2542.45Diphthine--ammonia ligase n=1 Tax=Pseudo-nitzschia... [more]
A0A1Z5JAT7_FISSO2.500e-2342.75Diphthine--ammonia ligase n=1 Tax=Fistulifera sola... [more]
A0A448ZP43_9STRA1.580e-2238.41Diphthine--ammonia ligase n=1 Tax=Pseudo-nitzschia... [more]
A0A7S1VFR5_9STRA2.220e-1650.65Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S2Y7F9_9STRA2.000e-1444.55Hypothetical protein (Fragment) n=2 Tax=Amphiprora... [more]
A0A7S2KWY5_9STRA1.380e-1237.91Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 1..134
e-value: 7.3E-7
score: 31.3
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 5..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..103
NoneNo IPR availableCDDcd00448YjgF_YER057c_UK114_familycoord: 5..42
e-value: 0.00116824
score: 34.4563

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1196contigScGOVlb_1196:940..1350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13222.t1Gvermi13222.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1196 940..1350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13222.t1 ID=Gvermi13222.t1|Name=Gvermi13222.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=137bp
MKLRETWTEQLEQCWTNVARVLDAVDAASIKDVLSCLLYVADSVFFELDA
LPKIATICKGQMECNGGVVPGAVDGIAQAAADTDLDGYEDEETRREVEGE
VAQDDDKPKCCPILVVSIPQIPVGALTEVEIVAASR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035959RutC-like_sf