Gvermi12924.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12924.t1
Unique NameGvermi12924.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length200
Homology
BLAST of Gvermi12924.t1 vs. uniprot
Match: A0A2V3J5B5_9FLOR (DDE Tnp4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5B5_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 5.380e-51
Identity = 88/199 (44.22%), Postives = 126/199 (63.32%), Query Frame = 0
Query:    2 DNSNDDMQTAIAFMAQITAQQHHISQLXXXXXXXXXXXXXXXXXXXXDDETDSK-QFLGRGYTRYNKKATYVRREPTDFYRFIRYKDADINVLQKITHLTASDFDALHSIVEPELSKPFNVFGRFDENGQRVARRRKFNTKELLFILFDVDGGSNKGGQGLEHMLLQYGCSIASLSSYFRYAFFAVPKSLDAICPKRVR 199
            ++S+DD  TA+A  +Q  AQQ H  +L                     +E+++     GRG T +  KATYVRR P+  Y ++R++DADI++ +KITHLT +DFD+LH + E EL +PF+V  +      RV R+RK NT+E+LF LFD+ GG N+G QGLEHM L+YG S+ S+S+YFR+   A+ KSLD + P+ VR
Sbjct:    3 EDSDDDNSTAMALTSQFVAQQQHTQRLLKQGNIAANSFICSSTHTSDKEESETSISRSGRGNTLFLHKATYVRRHPSGIYNYVRFQDADIHLFKKITHLTLADFDSLHHLAEVELQEPFDVRHQLHPETVRVPRKRKLNTQEILFFLFDIFGGPNEGNQGLEHMALKYGMSVGSVSNYFRHGLMALHKSLDEVTPRLVR 201          
BLAST of Gvermi12924.t1 vs. uniprot
Match: A0A2V3IMS8_9FLOR (DDE Tnp4 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMS8_9FLOR)

HSP 1 Score: 175 bits (443), Expect = 1.030e-49
Identity = 92/198 (46.46%), Postives = 129/198 (65.15%), Query Frame = 0
Query:    2 DNSNDDMQTAIAFMAQITAQQHHISQLXXXXXXXXXXXXXXXXXXXXDDETDSKQFLGRGYTRYNKKATYVRREPTDFYRFIRYKDADINVLQKITHLTASDFDALHSIVEPELSKPFNVFGRFDENGQRVARRRKFNTKELLFILFDVDGGSNKGGQGLEHMLLQYGCSIASLSSYFRYAFFAVPKSLDAICPKRVR 199
            D+ +DD+ TA++F++Q  AQQ H  Q+                    ++E + +   GRG T + KKATYVRR+ + FY  + Y DAD  + +KITHLTAS+FDALH +V  ELS  FN+   F ++  RV ++RK +T+ELLF LFDV GGSN+GG+ LEHM ++Y CS  ++S++FR+A FA+ KSLDA  PK VR
Sbjct:    3 DDGDDDLSTAVSFLSQFLAQQQHTFQMLAAANYTAFTYRNRHNPESSEEE-ELQTKPGRGNTLFTKKATYVRRDQSKFYTKVGYHDADTYLFKKITHLTASEFDALHDLVAEELSTLFNIRKSFPQDN-RVPKKRKLDTRELLFFLFDVLGGSNEGGRSLEHMAVKYDCSTVTVSNHFRHALFALRKSLDAAIPKPVR 198          
BLAST of Gvermi12924.t1 vs. uniprot
Match: A0A2V3J209_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J209_9FLOR)

HSP 1 Score: 82.4 bits (202), Expect = 5.670e-17
Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 0
Query:    2 DNSNDDMQTAIAFMAQITAQQHHISQLXXXXXXXXXXXXXXXXXXXXDDETDSKQFLGRGYTRYNKKATYVRREPTDFYRFIRYKDADINVLQKITHLTASDFDALHSIV 111
            D+ NDD+ TA++F++Q  AQQ H SQ+                    D+E + +   GR  T + KKA YVRRE + FY  ++Y++A+  + +KITHLTAS+ DAL+ +V
Sbjct:    3 DDGNDDLNTAVSFLSQFLAQQQHTSQMLAAADSAAFTYRNRHNPESSDEE-ELQTKPGRSNTLFTKKANYVRREQSKFYEKVQYRNANTYLFKKITHLTASEIDALYDLV 111          
BLAST of Gvermi12924.t1 vs. uniprot
Match: A0A2V3IYC2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYC2_9FLOR)

HSP 1 Score: 73.6 bits (179), Expect = 3.460e-13
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 0
Query:    3 NSNDD-MQTAIAFMAQITAQQHHISQ-LXXXXXXXXXXXXXXXXXXXXDDETDSKQFLGRGYTRYNKKATYVRREPTDFYRFIRYKDADINVLQKITHLTASDFDALHSIVEPELSK 117
            N  DD + TA++FM+   A Q H SQ L                     DE + +   GR    ++KKATYV RE ++FY+ +RY D +  + +K  HLT S+FDALH +V  ELS+
Sbjct:   13 NDGDDYLDTAVSFMSLFLAHQQHTSQMLAAAQSAALALLYPGAHVAEIRDEEELRTKPGRSNNLFSKKATYVLREQSNFYKKLRYHDENKYLFKKTNHLTISEFDALHEVVAQELSR 129          
The following BLAST results are available for this feature:
BLAST of Gvermi12924.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J5B5_9FLOR5.380e-5144.22DDE Tnp4 domain-containing protein n=1 Tax=Gracila... [more]
A0A2V3IMS8_9FLOR1.030e-4946.46DDE Tnp4 domain-containing protein n=1 Tax=Gracila... [more]
A0A2V3J209_9FLOR5.670e-1739.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYC2_9FLOR3.460e-1337.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:2123262..2123861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12924.t1Gvermi12924.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 2123262..2123861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12924.t1 ID=Gvermi12924.t1|Name=Gvermi12924.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=200bp
MDNSNDDMQTAIAFMAQITAQQHHISQLLAASNTAAQAYHHRQEDNKSDD
ETDSKQFLGRGYTRYNKKATYVRREPTDFYRFIRYKDADINVLQKITHLT
ASDFDALHSIVEPELSKPFNVFGRFDENGQRVARRRKFNTKELLFILFDV
DGGSNKGGQGLEHMLLQYGCSIASLSSYFRYAFFAVPKSLDAICPKRVR*
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