Gvermi12921.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12921.t1
Unique NameGvermi12921.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length635
Homology
BLAST of Gvermi12921.t1 vs. uniprot
Match: A0A2V3IU02_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU02_9FLOR)

HSP 1 Score: 806 bits (2082), Expect = 3.170e-288
Identity = 407/613 (66.39%), Postives = 462/613 (75.37%), Query Frame = 0
Query:   30 AKREQQMPSPTAKPAALPSPTKTLWPAPPPSTPVGNWVLHQHSFAPKREYFIAYCAGLARRRITDHLMWFRFPAVPGRSEQRVAVHYSRLAWVGGPLAELVASPADRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDAGGAREEARSETXXXXXXXXXXXDERMSAADE--GAQRDASG------AADEDADHPYRRAEAYDLSELDTPRTFAIVVKFLYCEEIQFNYLTFDELVALATTAHRWSLTDLYHATFAYVTDQDLLAGGLGIRTFLPLVAHEETPEPFRRYFCIAVGHHFDVLFPRLRAVREATPERTPALWRTVFKQKMTSHVVHCITLYSRGLYDEYLLDVVLRYFERQVESSDDEVSGLLSQLSWDDIDVGAVFSAGGASRAWSTRGVRLAALASYAPQTAALEVRIPWNVPLQRLLKQAAWSFQTEHVACGPYVCYLHVRKGVGREVSLFVHIWDADNKPLKDDVRHETVRVKCRATEANCACDSWKQWSDCSHGFLENLRFEGQLRRYPGLGWSQFLEERRLDEWRHAHGPDCGLAITTVLQFVRPTRPFEGPPRRSRPRAASPPRLQPPIHKKRSRSRMKLRDSR 634
            AKRE  + +PT KP+ LPSP KT+WPAPPPSTPVGNW+LHQHSFAPKR+YF AYCAGLARRR+ DHLMWFRFP+ P   +QR+AVHYSRLAWVGGPLAELVASP ++                                          + DA      A+              D  M  AD+  G Q D           DED DHPYRR + +DL+E DTPRTFAIV+KFLYCEEIQ NYLTFDELV+LA TAHRW LTDLYHATF+YV DQDLL+GGLGIRTFLPL AHEETPE FRRY CIAVGHHFDVL+PRLRA+++A PE TP LW+TVF+QKM SHV+H I+LYS  +Y++YLLDVVLRY+E   +++DD++ GLLSQLSWDD+DV A F A GAS+ WS R VRLAALA+YAPQT ALEVRIPWN+PLQRLLKQ  WSFQTEHV CGPY+CYLHVRKG GREVSLFVHIW+ +NKPL+D+ RHE VRVKCRATE NC CDS KQWSD  HGFLENLRFEG+L RYPGLGWSQFLEE+RLDEWR+AHG  CGLAITTVLQFV P + FEGP +RSR   +SP RLQ PI KKRS SRMKLR+SR
Sbjct:   15 AKRELLLSTPT-KPSTLPSPKKTVWPAPPPSTPVGNWILHQHSFAPKRDYFKAYCAGLARRRVVDHLMWFRFPSAPDTKQQRIAVHYSRLAWVGGPLAELVASPTEQ------------------------------------GKSATVQDDASKTEPPAKP-------------DADMDEADDTAGQQSDVRMDDQKPVTPDEDPDHPYRRPDPFDLTEDDTPRTFAIVIKFLYCEEIQLNYLTFDELVSLAKTAHRWHLTDLYHATFSYVMDQDLLSGGLGIRTFLPLAAHEETPEQFRRYVCIAVGHHFDVLYPRLRAMKKANPEVTPLLWQTVFRQKMLSHVLHTISLYSPRMYNDYLLDVVLRYYEPHSDTTDDQLLGLLSQLSWDDMDVAAAFGADGASKWWSARAVRLAALAAYAPQTQALEVRIPWNIPLQRLLKQDVWSFQTEHVPCGPYICYLHVRKGAGREVSLFVHIWNRENKPLQDEARHEMVRVKCRATERNCRCDSSKQWSDSWHGFLENLRFEGKLERYPGLGWSQFLEEKRLDEWRNAHGEHCGLAITTVLQFVNPKKQFEGPAKRSR--TSSPGRLQSPIQKKRSGSRMKLRESR 575          
BLAST of Gvermi12921.t1 vs. uniprot
Match: R7QK62_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK62_CHOCR)

HSP 1 Score: 641 bits (1654), Expect = 2.460e-223
Identity = 339/603 (56.22%), Postives = 412/603 (68.33%), Query Frame = 0
Query:   46 LPSPTKTLWPAPPPSTPVGNWVLHQHSFAPKREYFIAYCAGLARRRITDHLMWFRFPAVPGRSEQRVAVHYSRLAWVGGPLAELVASPADRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDAGGAREEARSETXXXXXXXXXXXDERMSAADEGAQRDASGAADEDA------DHPYRRAEAYDLSELDTPRTFAIVVKFLYCEEIQFNYLTFDELVALATTAHRWSLTDLYHATFAYVTDQDLLAGGLGIRTFLPLVAHEETPEPFRRYFCIAVGHHFDVLFPRLRAVR--EATPE---RTPALWRTVFKQKMTSHVVHCITLYSRGLYDEYLLDVVLRYFERQVESSDDEVSGLLSQLSWDDIDVGAVFSAGGASRAWSTRGVRLAALASY-APQTAALEVRIPWNVPLQRLLKQAAWSFQTEHVACGPYVCYLHVRKGVGREVSLFVHIWDADNKPLKDDVRHETVRVKCRATEANCACDSWKQWSDCSHGFLENLRFEGQLRRYPGLGWSQFLEERRLDEWRHAHGPDCGLAITTVLQFVRPTRPFEGPPRRSRPRAASPPRLQPPIHKKRSR--SRMKLRDSR 634
            LPSPTK   P  PPST VGNW+LH+HSFAP+REYF+++CA L+RRR+ DHLM FRFP       + VAVHYSRLA  GGP+A L+    +                                           E D    +E  +S++           ++ +S+  E  +++A    D++       D P R++    LS+ DTPR F I+VKFLYCEE+QFNYLTF E+V LA  AHRW LTDLY+ATFAYV DQ+LLA GLGIRTF+PLV+H ETPE FRRYFCIAVGHHFDVL+PRL+A+   E+T       P LW  +  Q M SHV+HCI LYS   YD+YLLDVVLRY+E +  S D+E+ GLLSQL+WD+I++   F++ G S+ WS R +R+AALAS+ APQT ALEVRIPWN+PLQ+LLK+  WSFQTEHV CGPYVCYLHVRKG G EVSLFVHIW  D KP+  D RHE+VRVKCRATE NC CDS +QWS+ SHGFLENL FEG+L  YPGLGWSQFLE +R++EWR +HG  CGLAITTVLQF+RP + FEGP RRS  RA SP R+   I KK SR  +RMKLR+SR
Sbjct:   10 LPSPTKISLPPMPPSTLVGNWILHEHSFAPQREYFMSFCAQLSRRRVVDHLMSFRFPQ---EDIEPVAVHYSRLALAGGPMAALLREKKEED---------------------------------VVMGTPGREKD----KENDKSDSSKKEDGKGKPVEKDVSSEKEANEKEADPMLDDEPSLVRTPDSPPRKSPVL-LSDDDTPRVFNIIVKFLYCEEVQFNYLTFQEVVQLAVAAHRWQLTDLYNATFAYVMDQNLLADGLGIRTFIPLVSHAETPEAFRRYFCIAVGHHFDVLYPRLKAISLTESTAPVSLSVPPLWDVIVSQNMLSHVIHCIGLYSEESYDQYLLDVVLRYYEPKKGSMDEELQGLLSQLNWDEIELSETFASDGPSKNWSARAIRMAALASFDAPQTQALEVRIPWNIPLQKLLKENTWSFQTEHVLCGPYVCYLHVRKGTGPEVSLFVHIWYRDGKPIGADARHESVRVKCRATERNCRCDSGRQWSNTSHGFLENLSFEGKLEGYPGLGWSQFLEAKRIEEWRTSHGEGCGLAITTVLQFMRPKKQFEGPARRSL-RAPSPGRVVSAIQKKHSRPSTRMKLRESR 570          
The following BLAST results are available for this feature:
BLAST of Gvermi12921.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IU02_9FLOR3.170e-28866.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QK62_CHOCR2.460e-22356.22Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 596..634

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:2091226..2093130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12921.t1Gvermi12921.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 2091226..2093130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12921.t1 ID=Gvermi12921.t1|Name=Gvermi12921.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=635bp
MAASATDAPSSPAPPPAPPPAPSAATTPNAKREQQMPSPTAKPAALPSPT
KTLWPAPPPSTPVGNWVLHQHSFAPKREYFIAYCAGLARRRITDHLMWFR
FPAVPGRSEQRVAVHYSRLAWVGGPLAELVASPADRKPPPAAAAAAAAAA
PTANNTTSEGGGGGGGGGGGGGGGGGGGESDAGGAREEARSETKADAEPD
AQRDDERMSAADEGAQRDASGAADEDADHPYRRAEAYDLSELDTPRTFAI
VVKFLYCEEIQFNYLTFDELVALATTAHRWSLTDLYHATFAYVTDQDLLA
GGLGIRTFLPLVAHEETPEPFRRYFCIAVGHHFDVLFPRLRAVREATPER
TPALWRTVFKQKMTSHVVHCITLYSRGLYDEYLLDVVLRYFERQVESSDD
EVSGLLSQLSWDDIDVGAVFSAGGASRAWSTRGVRLAALASYAPQTAALE
VRIPWNVPLQRLLKQAAWSFQTEHVACGPYVCYLHVRKGVGREVSLFVHI
WDADNKPLKDDVRHETVRVKCRATEANCACDSWKQWSDCSHGFLENLRFE
GQLRRYPGLGWSQFLEERRLDEWRHAHGPDCGLAITTVLQFVRPTRPFEG
PPRRSRPRAASPPRLQPPIHKKRSRSRMKLRDSR*
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