Gvermi12893.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12893.t1
Unique NameGvermi12893.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length110
Homology
BLAST of Gvermi12893.t1 vs. uniprot
Match: A0A2V3J2Q6_9FLOR (Mitochondrial import inner membrane translocase subunit Tim9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Q6_9FLOR)

HSP 1 Score: 142 bits (359), Expect = 4.640e-42
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 0
Query:   37 QVADSLRMYNDLVQKCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQEHQQEMAEEAAKAQQGK 109
            QVADSLRMYN+LVQ+CFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQEHQQEMAEEAAKAQQ K
Sbjct:   37 QVADSLRMYNELVQRCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQEHQQEMAEEAAKAQQNK 109          
BLAST of Gvermi12893.t1 vs. uniprot
Match: R7QJV4_CHOCR (zf-Tim10_DDP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJV4_CHOCR)

HSP 1 Score: 112 bits (280), Expect = 3.350e-30
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 0
Query:   38 VADSLRMYNDLVQKCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQEHQQEMAEEAAKAQ 106
            + DSLRMYN+LV++CFGHCVE FRSRKLDGKEEACI +C +KF+KF  RA +RFQEHQ+EMAEEAAKAQ
Sbjct:   26 MVDSLRMYNELVERCFGHCVETFRSRKLDGKEEACIRKCSEKFVKFAARAGERFQEHQKEMAEEAAKAQ 94          
BLAST of Gvermi12893.t1 vs. uniprot
Match: A0A2V0PPM2_9CHLO (Mitochondrial import inner membrane translocase subunit Tim9 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PPM2_9CHLO)

HSP 1 Score: 80.9 bits (198), Expect = 1.120e-17
Identity = 37/69 (53.62%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   37 QVADSLRMYNDLVQKCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQEHQQEMAEEAAKA 105
            Q+ DS+R+YN+LVQ+CF  CV++FRS+ L   EE C+ RCC+KFL  + R  QRFQE   EM ++AA+A
Sbjct:   27 QIRDSMRLYNNLVQRCFNDCVDDFRSKHLTTGEEKCVTRCCEKFLNLSARTGQRFQELFSEMEQKAAEA 95          
BLAST of Gvermi12893.t1 vs. uniprot
Match: A0A813G295_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G295_POLGL)

HSP 1 Score: 79.7 bits (195), Expect = 1.720e-17
Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 0
Query:   37 QVADSLRMYNDLVQKCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQEHQQEMAEEAA 103
            Q+ +S+  YN+LV++CF  CV +FR++ LDG EE C+ RC QKF+ F+QR  QRFQE QQ++ ++ A
Sbjct:   11 QMQESMNTYNNLVERCFNECVTSFRTKGLDGTEEQCVKRCVQKFMSFSQRVAQRFQEKQQQLGQKMA 77          
BLAST of Gvermi12893.t1 vs. uniprot
Match: A0A176WJQ3_MARPO (zf-Tim10_DDP domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WJQ3_MARPO)

HSP 1 Score: 78.2 bits (191), Expect = 8.840e-17
Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 0
Query:   37 QVADSLRMYNDLVQKCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQE 93
            QV+DSL+MYN LV++CF HC+ENFR + LD +EE C+ RC +K+LK + R + RF E
Sbjct:   23 QVSDSLKMYNSLVERCFSHCIENFRRKTLDKQEETCVKRCAEKYLKHSMRVSMRFAE 79          
BLAST of Gvermi12893.t1 vs. uniprot
Match: M1VL90_CYAM1 (Mitochondrial intermembrane space complex subunit Tim9 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VL90_CYAM1)

HSP 1 Score: 78.2 bits (191), Expect = 1.580e-16
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 0
Query:   37 QVADSLRMYNDLVQKCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQE 93
            Q+ DS+R+YN+LV  CF +CV++FRS KL+ KEEAC+ +C QKFLK   RA QRF E
Sbjct:   24 QIQDSMRLYNELVYLCFNNCVDSFRSSKLEAKEEACVTKCAQKFLKLAARAGQRFAE 80          
BLAST of Gvermi12893.t1 vs. uniprot
Match: D8QP64_SELML (zf-Tim10_DDP domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QP64_SELML)

HSP 1 Score: 77.4 bits (189), Expect = 1.730e-16
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 0
Query:   37 QVADSLRMYNDLVQKCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQE 93
            Q  DSLRMYN LV++CFGHCV++FR + L+ +EE C+ RC +KFLK   R + RFQE
Sbjct:   22 QARDSLRMYNALVERCFGHCVDSFRRKTLEKQEETCVKRCAEKFLKHAMRVSMRFQE 78          
BLAST of Gvermi12893.t1 vs. uniprot
Match: A0A7S1WXW9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WXW9_ALECA)

HSP 1 Score: 77.8 bits (190), Expect = 3.370e-16
Identity = 32/64 (50.00%), Postives = 48/64 (75.00%), Query Frame = 0
Query:   37 QVADSLRMYNDLVQKCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQEHQQEMAE 100
            Q+A+S+  YN+LV++CF  CV +F+++ L+  E+ C+ RC QKF+ FTQR  QRFQE QQ+M +
Sbjct:   61 QMAESMNTYNNLVERCFNECVTSFKTKSLESTEDQCVKRCVQKFMSFTQRVAQRFQEKQQQMGQ 124          
BLAST of Gvermi12893.t1 vs. uniprot
Match: F0Y4A4_AURAN (zf-Tim10_DDP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4A4_AURAN)

HSP 1 Score: 74.7 bits (182), Expect = 2.390e-15
Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 0
Query:   37 QVADSLRMYNDLVQKCFGHCVE----NFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQEHQ 95
            Q+ DSL+MYN+LV++CF HCV     +FRS+ LD KE+ CI RC +K++K TQR   RF EHQ
Sbjct:   23 QMKDSLKMYNNLVEQCFAHCVAARDGSFRSKALDKKEDECICRCAEKYIKLTQRVGFRFAEHQ 85          
BLAST of Gvermi12893.t1 vs. uniprot
Match: A0A5J4YI75_PORPP (Guanosine-diphosphatase n=3 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YI75_PORPP)

HSP 1 Score: 80.1 bits (196), Expect = 2.760e-15
Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = 0
Query:   37 QVADSLRMYNDLVQKCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQEHQQE 97
            ++ ++L+ YND V +CFG CV++FR + LDGKEEAC+ +C +KF+KF+QRA  RF E QQE
Sbjct:  504 EMEETLKTYNDTVYRCFGECVDSFRGKTLDGKEEACVRKCAEKFVKFSQRAQMRFGEKQQE 564          
The following BLAST results are available for this feature:
BLAST of Gvermi12893.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2Q6_9FLOR4.640e-4295.89Mitochondrial import inner membrane translocase su... [more]
R7QJV4_CHOCR3.350e-3076.81zf-Tim10_DDP domain-containing protein n=1 Tax=Cho... [more]
A0A2V0PPM2_9CHLO1.120e-1753.62Mitochondrial import inner membrane translocase su... [more]
A0A813G295_POLGL1.720e-1750.75Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A176WJQ3_MARPO8.840e-1756.14zf-Tim10_DDP domain-containing protein n=2 Tax=Mar... [more]
M1VL90_CYAM11.580e-1659.65Mitochondrial intermembrane space complex subunit ... [more]
D8QP64_SELML1.730e-1657.89zf-Tim10_DDP domain-containing protein n=3 Tax=Sel... [more]
A0A7S1WXW9_ALECA3.370e-1650.00Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
F0Y4A4_AURAN2.390e-1555.56zf-Tim10_DDP domain-containing protein n=1 Tax=Aur... [more]
A0A5J4YI75_PORPP2.760e-1555.74Guanosine-diphosphatase n=3 Tax=Porphyridium purpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..104
NoneNo IPR availablePANTHERPTHR13172:SF5MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9coord: 19..107
NoneNo IPR availablePANTHERPTHR13172MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9Bcoord: 19..107
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 31..93
e-value: 2.7E-18
score: 65.3
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810Mitochondrial import inner membrane translocase subunit tim13 like domainscoord: 16..109
e-value: 4.5E-22
score: 79.6
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 37..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1971555..1971976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12893.t1Gvermi12893.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1971555..1971976 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12893.t1 ID=Gvermi12893.t1|Name=Gvermi12893.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=110bp
MAGLGGMGGFGGLGGMNSQAQQQQEQMRFMEMMQEMQVADSLRMYNDLVQ
KCFGHCVENFRSRKLDGKEEACIVRCCQKFLKFTQRATQRFQEHQQEMAE
EAAKAQQGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004217Tim10-like
IPR035427Tim10-like_dom_sf