Gvermi12888.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12888.t1
Unique NameGvermi12888.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length405
Homology
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A2V3J2F3_9FLOR (Cochlin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2F3_9FLOR)

HSP 1 Score: 512 bits (1319), Expect = 2.130e-179
Identity = 278/337 (82.49%), Postives = 293/337 (86.94%), Query Frame = 0
Query:   77 PAFDLTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHP-APHLPRPS-WP----APSQSP--EPATPPADTPSPL-SFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQGGMNFTLRRLGSTK 404
            P FDLTALPDELISMCYA LPATDLVALEHVSRRLRHLIAYD+VCWRRCT ARWGHLTTNSVLLPSAARHAGTWK+LYSEKA CDAKN PWLTLC SE LAILDLIK+HP APHLP  S W     A   SP  EPATPP D PSPL SFSSP SVM A P+  H  CINIVLLIDASSSVTDDDFDAMK+FAR LV SLR THP S VA+VQFNQHPKVEISLTPVS  KL+TAIDNMEQLMGSTDIAAPIRRAREIL+ EA PGDRAIVLLTDGQTHADEL +SEKEAR+A+++V ARMFTLGVGRDVDE GL RVA+GS+GGMNFTLRRLGSTK
Sbjct:   27 PTFDLTALPDELISMCYADLPATDLVALEHVSRRLRHLIAYDSVCWRRCTDARWGHLTTNSVLLPSAARHAGTWKNLYSEKAICDAKNNPWLTLCQSEMLAILDLIKQHPVAPHLPTTSHWSTTTNATHHSPPSEPATPPPDKPSPLFSFSSPASVM-AHPAPMHHQCINIVLLIDASSSVTDDDFDAMKNFARALVASLRHTHPKSAVALVQFNQHPKVEISLTPVSKAKLTTAIDNMEQLMGSTDIAAPIRRAREILSVEALPGDRAIVLLTDGQTHADELHESEKEARRAYEEVGARMFTLGVGRDVDELGLGRVASGSEGGMNFTLRRLGSTK 362          
BLAST of Gvermi12888.t1 vs. uniprot
Match: R7QFU2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFU2_CHOCR)

HSP 1 Score: 415 bits (1067), Expect = 1.630e-139
Identity = 218/328 (66.46%), Postives = 267/328 (81.40%), Query Frame = 0
Query:   81 LTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHPAPHLPRPS-WPAPSQSP--EPATPPADTPSPLSFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEE-ASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQGGMNFTLRRLGSTK 404
            LT+LPDELI+MCY+ L A DLVALEHVSRRLR LIAYD+VCW+RCT+ RWGHL+ NS +LPSAARHAGTWK LYSEKA+ DA + PWLTLC SE LA+LD+IK      +P P  WP  +      P++PP D+  P+S SSP+SVM   PS+P + C+++VLLIDASSSVTDDDF+ MKSF+  LV  LR +HP + V+VVQFNQHPKVE++LT V   +LS++I+NMEQ+MGSTDIAAPIRRAR+IL+E+   PGDRAIVLLTDGQTHADEL +SE+E+RKAF++V ARM+TLGVGRD+DE GL RVAAGS+GG+  TLRRL S+K
Sbjct:  149 LTSLPDELIAMCYSDLSAADLVALEHVSRRLRQLIAYDSVCWKRCTETRWGHLSANSAILPSAARHAGTWKRLYSEKAKTDADHTPWLTLCGSETLAVLDIIKGATT-QVPMPVYWPMSTDMDIAVPSSPPKDSVVPMSTSSPVSVM---PSNPAVSCLSVVLLIDASSSVTDDDFETMKSFSLALVEDLRVSHPEACVSVVQFNQHPKVEVALTNVCKSRLSSSIENMEQMMGSTDIAAPIRRARKILSEDDVRPGDRAIVLLTDGQTHADELQESERESRKAFEEVGARMYTLGVGRDIDEVGLGRVAAGSEGGVYVTLRRLVSSK 472          
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A6T6CNV7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CNV7_9RHOD)

HSP 1 Score: 266 bits (679), Expect = 6.690e-83
Identity = 158/331 (47.73%), Postives = 207/331 (62.54%), Query Frame = 0
Query:   81 LTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHPAPHLPRPSWPAPSQSPEPATPPADTPSPLSFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEASPG-DRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQ----------GGMNFTLRRL 400
            L  LPDELI  C  +L A DLV LE VSRRLR +++ D   WR    +RW   + +  +L  AA  AG WK LYSEK   + + APWL  C SE  AI++LIK                       PP  T SP+S      ++ A  +S   + +++V+L+D SSSVT+DDF AM+ F +TL+ SLR T+P S  A+VQFNQ+P+VE  L+P+++ +   A+D MEQ+MGSTDIAAPIR ARE+L    +PG D+ I+LLTDGQTH +EL  +E+EAR A ++  AR+FT GVGRDVDE+GL RVAAGS+          GG  FTLRRL
Sbjct:   29 LLLLPDELIGCCLQNLEAEDLVRLELVSRRLRSVVSSDYSRWRELCMSRWK--SNSPQVLELAAEFAGGWKRLYSEKHVSEKETAPWLVPCISEVSAIVELIKGE--------------------GPPTPTGSPVSI-----LLDAMGTSHFTNVLSVVILVDGSSSVTEDDFSAMRQFGKTLMGSLRSTYPGSHAALVQFNQYPRVESPLSPIASGESIAALDKMEQIMGSTDIAAPIRLARELLTSSNAPGGDKVILLLTDGQTHNEELAMTEREARGAAEECGARVFTFGVGRDVDEAGLERVAAGSRRFVEGKRKNFGGCYFTLRRL 332          
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A1X6NMF6_PORUM (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMF6_PORUM)

HSP 1 Score: 227 bits (578), Expect = 4.700e-67
Identity = 159/353 (45.04%), Postives = 211/353 (59.77%), Query Frame = 0
Query:   65 PAAPALAKRAPTPAFDLTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRH--PAPHLPRPSWPAPSQSPEPATPPADTPSPLSFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEI-SLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEE----ASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGS-----------QGGMNFTLRR 399
            PA  A+ + APT A +L ALPDEL+S C   L    LVALE   RRLR L++ D + WR+  + +WG    NS +L +AA  AG WK L++EK   + +   +++   SE  AIL +IK      PHL R S   PS SP  A  P   PSP   +SP+ V    P +     ++IV  +D SSSVT++DF AMK F R+LV SLR++HP + ++++QFNQ  K E+ +LTPV  P    A+ +M+QLMGSTDI  P+  A  ILA      +  GD+ I+LL+DGQTH +EL +SE + RKA +   AR + LGVGRDVDE GL RVAAG+           Q G  FTLRR
Sbjct:   43 PATTAM-ETAPTEA-ELLALPDELLSCCCEGLEVKSLVALELTCRRLRELVSSDTMRWRQAVKDKWGK-AYNSDILDAAAVIAGGWKQLFAEKYDPERRQTTFVSPVKSEVAAILSVIKGTGPTVPHLKRVSN-FPSSSPRAA--PTTPPSPPYGTSPVCVTIPMPDN-EPSPLSIVCCVDGSSSVTEEDFWAMKDFLRSLVSSLRESHPEAQLSLLQFNQTVKRELPALTPVG-PAAMVAVQSMKQLMGSTDIEKPLATAGSILAAADDGGSGSGDKVILLLSDGQTHMEELAKSEAQVRKAAETCGARFYALGVGRDVDEDGLRRVAAGTLLPARSHLKPVQQGAYFTLRR 387          
BLAST of Gvermi12888.t1 vs. uniprot
Match: M2Y1C3_GALSU (Collagen-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1C3_GALSU)

HSP 1 Score: 223 bits (569), Expect = 1.440e-64
Identity = 141/332 (42.47%), Postives = 196/332 (59.04%), Query Frame = 0
Query:   84 LPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKR------HPAPHLPRPSWPAPSQSPEPATPPADTPSPLSF--SSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRV-------AAGSQGGMNFTLRRL 400
            LPDE+IS    HL A DL++LE VS+R R ++  ++  WR   Q RW   + N+ +L +A+  AG WK LY EK   + + APW+    SE  A+L++IK       H +P     +      S +      D  +   +   SP S +S +   P    + I +LID SSSVT++DF AMK F R L+ SLR THP+S   ++QFNQ+P+VE+ L  VS P +   ++ +EQ+MGSTDIAAPIRRA +IL        + I+L+TDGQTHA+E   S  EARKAFD++ A  +  GVGRDVDE GL R+       ++ S+GG  FTLR+L
Sbjct:  169 LPDEIISSLLGHLDAKDLISLEFVSKRFRDIVRSESGQWRSIVQRRWSS-SANAEILETASLLAGGWKRLYMEKHLSEIRRAPWIVPSKSELEAMLEIIKSDCSLFPHGSPVGVYQTNDMHIFSNQACVANHDKLATTIYMDDSPTSAISDSSFPP----LCIAILIDGSSSVTEEDFIAMKEFCRALLASLRLTHPSSQACIIQFNQYPRVEVGLADVSKPGIMDTVERLEQMMGSTDIAAPIRRAHQILTTAHHNSHKVIILMTDGQTHAEEFELSILEARKAFDELNAAFYAFGVGRDVDEQGLQRIVYASRRSSSYSKGGY-FTLRKL 494          
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A7S0G5T3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5T3_9RHOD)

HSP 1 Score: 214 bits (544), Expect = 1.060e-62
Identity = 134/339 (39.53%), Postives = 196/339 (57.82%), Query Frame = 0
Query:   80 DLTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHPAPHLPRPSWPAPSQSPEPATPPADTPSPLSFSSPISVMSA-APSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEAS-PGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQ----------------GGMNFTLRRL 400
            ++  LP+E+I++C A L A DL+ +E ++ RLR L+  +   W+   +ARWG    NS LL +++  AG WK+LY++K   + KN PW+     E  AIL+L++   +                         SP+S S   SVMS  AP+      + +VLL+D SSSVT +DFDAMKSF R L+ +LR+  P+S + ++QFNQ P+  I +  +S   +   +D M+QLMGSTDIAAPI+ A E+L E+ +  GD  ++LL+DGQT   EL  S++EAR A + +  R+F  GVGRDVDE GL+R+AA ++                GG   TLRR+
Sbjct:   13 EMDMLPNEIINICLAELTARDLLHMEMINHRLRELVLKNNNLWKDKVKARWGMQANNS-LLEASSDLAGGWKNLYAQKHVSEKKNKPWIVPSAPEIEAILELVRGDSSRDR--------------------VGSPMSLSPTSSVMSEMAPARGLKRGLTVVLLLDGSSSVTREDFDAMKSFTRKLIDNLRERRPDSALGLIQFNQSPRTIIPICHISED-IPERVDKMQQLMGSTDIAAPIKTAHELLTEDGNFGGDAVVLLLSDGQTSTSELEASQREARSAAELMGVRLFAFGVGRDVDEMGLNRIAASTRIECEQLLDGTIIPERPGGAYLTLRRM 329          
BLAST of Gvermi12888.t1 vs. uniprot
Match: UPI001E1D8EE0 (cochlin-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8EE0)

HSP 1 Score: 186 bits (471), Expect = 9.670e-54
Identity = 97/161 (60.25%), Postives = 125/161 (77.64%), Query Frame = 0
Query:  236 INIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEE-ASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQGGMNF 395
            +++VLL+D SSSVT+DDF AMK F   LV SLR +H +S+VAV+QFNQ+PKV   LT V    L   I +M+Q+MGSTDIAAPIRRAR+ILAE+    G++AIV+LTDGQTH+DEL ++E+EAR+A     AR+F LGVGRDVDESGLSRVA+G+   ++ 
Sbjct:    9 LHVVLLVDGSSSVTEDDFYAMKQFCLELVASLRHSHTSSSVAVLQFNQYPKVHTGLTSVEKQSLIATIQSMDQMMGSTDIAAPIRRARQILAEDDTGVGEKAIVILTDGQTHSDELKEAEREARQAAIDSGARLFALGVGRDVDESGLSRVASGTSSALSI 169          
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A5J4ZAK9_PORPP (Collagen alpha-6(VI) chain n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAK9_PORPP)

HSP 1 Score: 186 bits (472), Expect = 2.470e-51
Identity = 124/331 (37.46%), Postives = 180/331 (54.38%), Query Frame = 0
Query:   81 LTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRH----PAPHLPRPSWPAPSQSPEPATPPADTPSPLSFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQ--------GGMNFTLRR 399
            L  LP E++S C   L A D+  LE V + LR  + +D++ WR     ++ +     VL  +AA +AG W+ LY  K       APW +    E  AI D+I +     P  HL +      S+SP   T   D            V + A +  H   + ++ L+D SSSVT++DF  MK+F   L+ S+R +HP S V ++QFNQ P+VE+   P+    ++  +  ++Q+MGSTDI+AP+R+  E+  EEA   D  +VLLTDGQT A+EL Q+E+   +       RMFT+GVGRDVDESGL R+AA ++        GG  F LR+
Sbjct:   78 LDGLPSEVLSQCLKGLSAQDMATLERVDKHLRDAVQHDSLRWRDVVLRQFSYNEPCDVL-DAAAHYAGGWRSLYVAKVTDAKTKAPWYSPTDFEVRAICDVITQQNLKAPHHHLGKSVDYGLSRSP---TNIMD-----------DVYAGANAVKH--DMAVLFLLDGSSSVTEEDFKTMKAFCLKLIESVRLSHPKSVVGLIQFNQFPRVEMGFRPIGDAHVTQTVQALDQMMGSTDISAPVRQGHEMF-EEAWATDNVMVLLTDGQTQAEELRQTERYGEQGAISHGIRMFTMGVGRDVDESGLMRIAAAARKSMPRESVGGSYFALRK 390          
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A7S0ZFC0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFC0_9RHOD)

HSP 1 Score: 117 bits (293), Expect = 6.020e-28
Identity = 59/124 (47.58%), Postives = 87/124 (70.16%), Query Frame = 0
Query:  264 VHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAA 387
            V SL     N+   V+QFNQ P+VE++L+ +++ K+   +D +EQ+MGSTDIAAP++RA ++LAE     D+ ++LLTDGQTH++E+ Q++ +A +       RMF LGVGRDVDE GL RV +
Sbjct:    6 VCSLNLCERNAAFGVIQFNQIPRVELALSDITSEKVLETVDKLEQMMGSTDIAAPVKRAVQLLAE-VQAHDKVMILLTDGQTHSEEIRQTQIQAVRGATDYGLRMFALGVGRDVDEVGLGRVVS 128          
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A7S0ZFA3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFA3_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 1.650e-21
Identity = 73/196 (37.24%), Postives = 106/196 (54.08%), Query Frame = 0
Query:   81 LTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHP--APHLPRPSW----PAPSQSPEPATPPADTPSPLSFSSPISVMSAAPSSPHLDC---INIVLLIDASSSVTDDDFDAMKSFARTLVHSL 267
            L+ LPDELIS C + L A+D+  LE V++R+R+++  D+  WR     RWG+  +  +L  S+   AG+WK L+SEK   D  N PW   C SE  A+LD I+  P     + R       P   ++   A P + +P  +   S +   S   S  +      I +++LID SSSVT+DDF AM+ FAR+ V SL
Sbjct:   56 LSKLPDELISCCLSGLSASDMACLESVNQRMRYVVQNDSARWREVVLERWGNELSRDILDASSTL-AGSWKRLFSEKMMVDKANLPWRIPCSSEMDALLDAIQNRPQKTTQMERNGMKVLKPQTMKNNSGAYPFSQSPVSIMQDSNMMNDSVEESDSNTGKEYEIAVMVLIDGSSSVTEDDFRAMRRFARSTVCSL 250          
The following BLAST results are available for this feature:
BLAST of Gvermi12888.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2F3_9FLOR2.130e-17982.49Cochlin n=1 Tax=Gracilariopsis chorda TaxID=448386... [more]
R7QFU2_CHOCR1.630e-13966.46Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6T6CNV7_9RHOD6.690e-8347.73Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NMF6_PORUM4.700e-6745.04Uncharacterized protein n=2 Tax=Porphyra umbilical... [more]
M2Y1C3_GALSU1.440e-6442.47Collagen-related protein n=1 Tax=Galdieria sulphur... [more]
A0A7S0G5T3_9RHOD1.060e-6239.53Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
UPI001E1D8EE09.670e-5460.25cochlin-like n=1 Tax=Mercenaria mercenaria TaxID=6... [more]
A0A5J4ZAK9_PORPP2.470e-5137.46Collagen alpha-6(VI) chain n=1 Tax=Porphyridium pu... [more]
A0A7S0ZFC0_9RHOD6.020e-2847.58Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0ZFA3_9RHOD1.650e-2137.24Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00453VWFADOMAINcoord: 236..253
score: 36.22
coord: 336..344
score: 41.45
coord: 275..289
score: 30.0
NoneNo IPR availableGENE3D1.20.1280.50coord: 75..172
e-value: 6.6E-8
score: 34.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..214
NoneNo IPR availablePANTHERPTHR22588:SF3COLLAGEN, TYPE VI, ALPHA 4Acoord: 219..352
NoneNo IPR availablePANTHERPTHR22588UNCHARACTERIZEDcoord: 219..352
NoneNo IPR availableCDDcd00198vWFAcoord: 236..395
e-value: 1.32785E-30
score: 113.43
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 235..402
e-value: 6.4E-21
score: 85.5
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 237..399
e-value: 3.2E-26
score: 92.7
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 237..404
score: 19.97386
IPR001810F-box domainSMARTSM00256fbox_2coord: 84..124
e-value: 8.4E-6
score: 35.3
IPR001810F-box domainPFAMPF00646F-boxcoord: 84..116
e-value: 7.6E-5
score: 22.5
IPR001810F-box domainPROSITEPS50181FBOXcoord: 78..125
score: 12.809269
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 234..399
e-value: 7.2E-32
score: 112.6
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 232..391
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 76..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1940177..1941586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12888.t1Gvermi12888.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1940177..1941586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12888.t1 ID=Gvermi12888.t1|Name=Gvermi12888.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=405bp
LLTALQAIFYSLPLLRTLPFARRPSLLHTLPIPPPAMAHAAAASPSADPA
VHRQLQHQQLHPPPPAAPALAKRAPTPAFDLTALPDELISMCYAHLPATD
LVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTW
KHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHPAPHLPRPSWPAPSQ
SPEPATPPADTPSPLSFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTD
DDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLS
TAIDNMEQLMGSTDIAAPIRRAREILAEEASPGDRAIVLLTDGQTHADEL
CQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQGGMNFTLRRL
GSTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR001810F-box_dom
IPR036465vWFA_dom_sf
IPR036047F-box-like_dom_sf