Gvermi12868.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12868.t1
Unique NameGvermi12868.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length237
Homology
BLAST of Gvermi12868.t1 vs. uniprot
Match: A0A2V3J2L2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2L2_9FLOR)

HSP 1 Score: 337 bits (864), Expect = 3.830e-114
Identity = 165/236 (69.92%), Postives = 193/236 (81.78%), Query Frame = 0
Query:    1 MPSNRAFRFVYLRTLPLVKQPELGEDVEQIVGQIEDGTRRLCEKHLRSASDGRAAVHLHTTALAIATHRVLSPRIKNEKRVANIIRCGFGAELLEESSVPDEHAKQAKTMGRTRPDFWIIRAALWFSLDRMGAVRRMTENMVKDFGSTFETAKEDEVVDGAQHHSLFVKRCYYNELCRSEGVPHLTSIFCALDKAIYSPITTSSHGISFTLDKTLADESESDSTDKRCEFRFRQHK 236
            M SNRA RFVYLRTLPLVKQPEL ++V+ I   IEDGT++LC K++ + +D RAAVHLHTTALAIATHRVLSPRIKNE R+ NIIR GFGA  + + +V DE  K  ++ G+TRPDFWI+RAALWFS DRM AVRRMT NM++DFGSTFET+ ED+ +D    H+ FVK+CYYNELCR+E VPHLT IFCALDKAIYSPIT  SHGISFTLDKTLAD+S  +S + RCEFRF QHK
Sbjct:   55 MSSNRATRFVYLRTLPLVKQPELQDEVDAIAKSIEDGTQKLCAKYIETVTDDRAAVHLHTTALAIATHRVLSPRIKNEIRLCNIIRSGFGAVPVPDRNVSDEERKAVESGGKTRPDFWIVRAALWFSFDRMAAVRRMTANMMRDFGSTFETSTEDDEIDEQSRHNFFVKKCYYNELCRAEDVPHLTKIFCALDKAIYSPITADSHGISFTLDKTLADQSMHESNE-RCEFRFVQHK 289          
BLAST of Gvermi12868.t1 vs. uniprot
Match: R7QIG7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIG7_CHOCR)

HSP 1 Score: 196 bits (499), Expect = 9.740e-60
Identity = 94/170 (55.29%), Postives = 120/170 (70.59%), Query Frame = 0
Query:    1 MPSNRAFRFVYLRTLPLVKQPELGEDVEQIVGQIEDGTRRLCEKHLRSASDGRAAVHLHTTALAIATHRVLSPRIKNEKRVANIIRCGFGAELLEESSVPDEHAKQAKTMGRTRPDFWIIRAALWFSLDRMGAVRRMTENMVKDFGSTFETAKEDEVVDGAQHHSLFVKR 170
            M +N+A RFVYLRTLPLVKQPEL   V+++ G+IED T RLCEKH  +  D R+AVHLHT ALAIATHRVL PRI++E R+ N+IR G+GA+L+      +   K  +   R RPDFW++RAALW S +RM A+R+MT NM +DFG +FET   D   D  + HSL V +
Sbjct:   52 MAANKATRFVYLRTLPLVKQPELEGQVDEVAGRIEDMTARLCEKHGGALVDERSAVHLHTAALAIATHRVLEPRIRDEWRLGNVIRAGYGAKLVPARDATEADRKAVRVTERLRPDFWVVRAALWMSFNRMKAIRKMTSNMARDFGQSFETTSTDRHGDEGETHSLLVSK 221          
BLAST of Gvermi12868.t1 vs. uniprot
Match: M2Y8J8_GALSU (Uncharacterized protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y8J8_GALSU)

HSP 1 Score: 149 bits (375), Expect = 1.610e-40
Identity = 81/217 (37.33%), Postives = 126/217 (58.06%), Query Frame = 0
Query:    4 NRAFRFVYLRTLPLVKQPELGEDVEQIVGQIEDGTRRLCEKHLRSASDGRAAVHLHTTALAIATHRVLSPRI-KNEKRVANIIRCGFGAELLEESSVPDEHAKQAKTMGRTRPDFWIIRAALWFSLDRMGAVRRMTENMVKDFGSTFETAKEDEVVDGAQ--HHSLFVKRCYYNELCRSEGVPHLTSIFCALDKAIYSPITTSSHGISFTLDKTLAD 217
            NRAFR VY RTLPL +QPEL    ++I   IE   R+LC KH     D R+A H+H +++A+++++ L P +  +E+RV NI+  GFG   L + S   +   Q           WI++  L  SL+++  ++RM EN+ +DFG  F+  +E EV    +   H + V+RC Y++   +EG P +T +FCALD++ +  +    HG+ FTL +TL D
Sbjct:   51 NRAFRHVYFRTLPLRRQPELKGKEKEICESIETEARQLCWKHRERVVDDRSAAHIHLSSMALSSYKTLLPLLDSDEERVLNIVGRGFG---LADVSSSSKSGLQ-----------WILQFMLLVSLNKLRTLKRMAENIERDFGKGFDIVQESEVDSNNKLVAHQMVVRRCLYHDFFVAEGYPQVTRLFCALDRSYFGEVKEKRHGVRFTLSQTLVD 253          
BLAST of Gvermi12868.t1 vs. uniprot
Match: M1V8T5_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V8T5_CYAM1)

HSP 1 Score: 89.7 bits (221), Expect = 4.300e-18
Identity = 75/239 (31.38%), Postives = 106/239 (44.35%), Query Frame = 0
Query:    4 NRAFRFVYLRTLPLVKQPEL----GEDVEQIVGQIEDGTRRLCEKHLR--------------SAS-------DGRAAVHLHTTALAIATHRVLSPRIKN-EKRVANIIRCGFGAELLEESSVPDEHAKQAKTMGRTRPDFWIIRAALWFSLDRMGAVRRMTENMVKDFGSTFETAKEDEVVDGAQHHSLFVKRCYYNELCRSEGVPHLTSIFCALDKAIYSPITTSSHGISFTLDKTLA 216
            N  FRFV+LR LPLV+QPEL      ++  I  QI    +     HL               SAS       D R+  H+   + A+  +R L P + N E+R   ++R GFG   ++  S P   +   + M R R         L+ + D   A   + E  V D G  FE A+         H  L + RC Y E+ R EGVP L S+FCA+D+A +  ++       FTL+  LA
Sbjct:    2 NTLFRFVFLRALPLVQQPELRSASATELADIAKQITSTAQDRYTHHLERLERSRLAPSAGTPSASVPETTTLDERSQTHVRLASWALGAYRTLYPLLSNDEERTLRVVRQGFG---VQGDSTPQSVSLLQRLMVRFR---------LFLARDPRRARLMLAERFVADLGPLFE-ARWAPTRHPEAHDVLLIHRCLYEEIFRLEGVPKLLSLFCAMDRANFVDLS------QFTLEPGLA 221          
BLAST of Gvermi12868.t1 vs. uniprot
Match: A0A7J7IJH6_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJH6_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 2.260e-17
Identity = 75/240 (31.25%), Postives = 110/240 (45.83%), Query Frame = 0
Query:    4 NRAFRFVYLRTLPLVKQPEL----GEDVEQIVGQIEDGTRRLCEKHL------RSAS---------------DGRAAVHLHTTALAIATHRVLSPRI-KNEKRVANIIRCGFGAELLEESSVPDEHAKQAKTMGRTRPDFWIIRAALWFSLDRMGAVRRMTENMVKDFGSTFETAKEDEVVDGAQHHS-LFVKRCYYNELCRSEGVPHLTSIFCALDKAIYSPITTSSHGISFTLDKTLA 216
            N  FRFVYLR LPLV+QPEL      D+ ++  QIE         HL      RS++               D R   H+   + A+ T+RVL P + ++E+R   ++R GFG   ++ + +P   +     M R R         L F+ DR  A   + E   +D G  FE         GA+    L ++ C Y E+ R E VP L S+FCA+D+A ++ +        FTL+  LA
Sbjct:    2 NSLFRFVYLRALPLVQQPELRSATATDLNELGKQIETTAGSCYRYHLERIWRERSSTPPEVPLEEPAMETLLDERTRTHVRLASWALGTYRVLYPILSRDERRTLQVVRQGFG---VQGTDMPRAVSALHHLMVRLR---------LIFARDRRRARLELAERFERDLGPLFEPQWVSR--HGAEVRDVLLIRHCIYAEIFRLERVPQLLSMFCAMDRASFAGLA------EFTLEPGLA 221          
The following BLAST results are available for this feature:
BLAST of Gvermi12868.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J2L2_9FLOR3.830e-11469.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIG7_CHOCR9.740e-6055.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2Y8J8_GALSU1.610e-4037.33Uncharacterized protein n=2 Tax=Galdieria sulphura... [more]
M1V8T5_CYAM14.300e-1831.38Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A7J7IJH6_9RHOD2.260e-1731.25Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026002L-2-amino-thiazoline-4-carboxylic acid hydrolasePFAMPF14196ATC_hydrolasecoord: 142..218
e-value: 2.4E-9
score: 38.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1852941..1853763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12868.t1Gvermi12868.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1852941..1853763 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12868.t1 ID=Gvermi12868.t1|Name=Gvermi12868.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=237bp
MPSNRAFRFVYLRTLPLVKQPELGEDVEQIVGQIEDGTRRLCEKHLRSAS
DGRAAVHLHTTALAIATHRVLSPRIKNEKRVANIIRCGFGAELLEESSVP
DEHAKQAKTMGRTRPDFWIIRAALWFSLDRMGAVRRMTENMVKDFGSTFE
TAKEDEVVDGAQHHSLFVKRCYYNELCRSEGVPHLTSIFCALDKAIYSPI
TTSSHGISFTLDKTLADESESDSTDKRCEFRFRQHK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026002ATC_hydrolase