Gvermi12865.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12865.t1
Unique NameGvermi12865.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length99
Homology
BLAST of Gvermi12865.t1 vs. uniprot
Match: A0A2V3J1G9_9FLOR (Small ubiquitin-related modifier 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1G9_9FLOR)

HSP 1 Score: 181 bits (460), Expect = 8.440e-58
Identity = 90/98 (91.84%), Postives = 93/98 (94.90%), Query Frame = 0
Query:    1 MAEKAPEDSKANVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG 98
            M+EKAPEDSK  VD KPEPG+QINIKVRDAEGNEVQFKIKKTTQLKKLMDAYC RMGT KGAYRFLFDGHRIN+EDTPESLDMQELDCVDAMVSQLGG
Sbjct:    1 MSEKAPEDSKPQVDAKPEPGDQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCLRMGTAKGAYRFLFDGHRINEEDTPESLDMQELDCVDAMVSQLGG 98          
BLAST of Gvermi12865.t1 vs. uniprot
Match: A0A1X6P2Q8_PORUM (Ubiquitin-like domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2Q8_PORUM)

HSP 1 Score: 126 bits (316), Expect = 1.760e-35
Identity = 62/95 (65.26%), Postives = 76/95 (80.00%), Query Frame = 0
Query:   14 DTKPEP----------GEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG 98
            D+KP+P           EQ+NIKVRD+EGNEVQF+IKK TQLKKLMDAYC RMGT+ G YRFLFDG+RIND DTPESL+M+++D +DA++ Q GG
Sbjct:   16 DSKPDPEGAGGDGGASSEQVNIKVRDSEGNEVQFRIKKKTQLKKLMDAYCGRMGTSVGTYRFLFDGNRINDTDTPESLEMEDMDVIDAVLFQQGG 110          
BLAST of Gvermi12865.t1 vs. uniprot
Match: A0A7J7IFI8_9RHOD (Small ubiquitin- modifier 1 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IFI8_9RHOD)

HSP 1 Score: 114 bits (285), Expect = 4.140e-31
Identity = 54/85 (63.53%), Postives = 68/85 (80.00%), Query Frame = 0
Query:   14 DTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG 98
            D K   G+QIN+KVRDA+GNEVQF+IKK T L+KLMDAYC R G    +YRFLFDG+RIN++DTPE L M+++D +DAM+ Q GG
Sbjct:   14 DVKTSGGDQINLKVRDADGNEVQFRIKKHTPLRKLMDAYCTRKGVDLHSYRFLFDGNRINEDDTPEKLGMEDMDSIDAMLFQQGG 98          
BLAST of Gvermi12865.t1 vs. uniprot
Match: A0A5J4YMR7_PORPP (Small ubiquitin-related modifier 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMR7_PORPP)

HSP 1 Score: 107 bits (267), Expect = 2.140e-28
Identity = 48/77 (62.34%), Postives = 64/77 (83.12%), Query Frame = 0
Query:   22 QINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG 98
            Q+NIKV+D++GNEVQFKIK+TT + KLM AY +R+G  +  YRF FDG+RI+  DTP+SLDM+++DC+DAMV Q GG
Sbjct:   20 QLNIKVKDSDGNEVQFKIKRTTPMSKLMSAYASRLGVDENTYRFNFDGNRISPSDTPDSLDMEDMDCIDAMVYQQGG 96          
BLAST of Gvermi12865.t1 vs. uniprot
Match: A0A7S0T4E4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4E4_9RHOD)

HSP 1 Score: 107 bits (267), Expect = 2.940e-28
Identity = 52/91 (57.14%), Postives = 66/91 (72.53%), Query Frame = 0
Query:    8 DSKANVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG 98
            D+K  V+      +QIN+KV+D +GNEV FKIK+TTQL+KLM AY  R+G     YRF+FDG R+ ++DTPE LDM E DC+DAMV Q GG
Sbjct:    6 DAKPKVEDATANADQINLKVKDVDGNEVNFKIKRTTQLQKLMKAYSERLGANIQTYRFMFDGKRVENDDTPEKLDMDEGDCIDAMVYQQGG 96          
BLAST of Gvermi12865.t1 vs. uniprot
Match: A0A0D1BVU7_USTMA (Ubiquitin-like domain-containing protein n=14 Tax=Ustilaginales TaxID=5267 RepID=A0A0D1BVU7_USTMA)

HSP 1 Score: 105 bits (263), Expect = 7.760e-28
Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 0
Query:   12 NVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG 98
            N   KPE GEQ+NIKV+DA+GNEV FK+K+TT+L KL  AY  RMG  + + RF+FDG RI D DT E+L M++ D +DAM+ QLGG
Sbjct:    6 NAQPKPEGGEQLNIKVKDADGNEVFFKVKRTTKLSKLKKAYAERMGKPENSVRFIFDGQRIGDNDTAETLGMEDQDEIDAMIEQLGG 92          
BLAST of Gvermi12865.t1 vs. uniprot
Match: A0A316ZGC6_9BASI (Ubiquitin-like protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316ZGC6_9BASI)

HSP 1 Score: 102 bits (253), Expect = 2.970e-26
Identity = 50/91 (54.95%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    8 DSKANVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG 98
            D++A    KPE  +Q+NIKV+D +GNEV FK+KK+T+L KL  AY  RMG  +   RFL+DG R+ND+DT ESL++++ D +DAMV QLGG
Sbjct:    5 DNEAPAAPKPEGADQLNIKVKDGDGNEVFFKVKKSTRLGKLRKAYAERMGKPENTVRFLYDGTRVNDDDTAESLEIEDQDEIDAMVEQLGG 95          
BLAST of Gvermi12865.t1 vs. uniprot
Match: A0A7S0ZD19_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZD19_9RHOD)

HSP 1 Score: 102 bits (253), Expect = 5.110e-26
Identity = 47/78 (60.26%), Postives = 61/78 (78.21%), Query Frame = 0
Query:   21 EQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG 98
            EQINIKV+D++GNEVQFKIK++T L KLM AY  R+G  +  +RF+FDG R+   DTP+SLDM + DC+DAM+ Q GG
Sbjct:   23 EQINIKVKDSDGNEVQFKIKRSTPLSKLMQAYSQRLGAQQDTFRFMFDGKRVQTGDTPDSLDMDDGDCIDAMIYQQGG 100          
BLAST of Gvermi12865.t1 vs. uniprot
Match: A0A7S2ZGT4_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZGT4_9RHOD)

HSP 1 Score: 101 bits (252), Expect = 5.300e-26
Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 0
Query:    4 KAPE-DSKANVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG 98
            K PE ++K    T+ +P   IN++V+D  GNEVQF+IKK+TQLKKLMD YC RMG     +RF+FDG+R+ + DTPE L+M++ D +DA+V Q GG
Sbjct:   11 KEPETEAKQEAKTEADPN-LINLRVKDGGGNEVQFRIKKSTQLKKLMDVYCQRMGAQPNTFRFIFDGNRVGETDTPEKLEMEQGDVIDALVFQQGG 105          
BLAST of Gvermi12865.t1 vs. uniprot
Match: M5EPR1_MALS4 (Ubiquitin-like protein of the SUMO family n=3 Tax=Malassezia TaxID=55193 RepID=M5EPR1_MALS4)

HSP 1 Score: 101 bits (251), Expect = 5.500e-26
Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 0
Query:   16 KPEPG-EQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG 98
            KPE   EQ+NIKV+DAEGNEV FK+K+TT+L KL  AY  RMG  + + RF+FDG R+ D+DT ESLDM + D +DAM+ QLGG
Sbjct:    8 KPEVAPEQLNIKVKDAEGNEVFFKVKRTTKLAKLKRAYAERMGKPENSVRFIFDGQRVGDDDTAESLDMNDQDEIDAMIEQLGG 91          
The following BLAST results are available for this feature:
BLAST of Gvermi12865.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1G9_9FLOR8.440e-5891.84Small ubiquitin-related modifier 2 n=1 Tax=Gracila... [more]
A0A1X6P2Q8_PORUM1.760e-3565.26Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A7J7IFI8_9RHOD4.140e-3163.53Small ubiquitin- modifier 1 n=2 Tax=Cyanidiaceae T... [more]
A0A5J4YMR7_PORPP2.140e-2862.34Small ubiquitin-related modifier 1 n=1 Tax=Porphyr... [more]
A0A7S0T4E4_9RHOD2.940e-2857.14Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A0D1BVU7_USTMA7.760e-2858.62Ubiquitin-like domain-containing protein n=14 Tax=... [more]
A0A316ZGC6_9BASI2.970e-2654.95Ubiquitin-like protein n=1 Tax=Tilletiopsis washin... [more]
A0A7S0ZD19_9RHOD5.110e-2660.26Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S2ZGT4_9RHOD5.300e-2653.13Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M5EPR1_MALS45.500e-2660.71Ubiquitin-like protein of the SUMO family n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 23..94
e-value: 6.4E-9
score: 45.6
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 21..98
score: 14.817369
NoneNo IPR availableGENE3D3.10.20.90coord: 1..98
e-value: 2.3E-33
score: 116.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR10562SMALL UBIQUITIN-RELATED MODIFIERcoord: 8..98
NoneNo IPR availableCDDcd16116Ubl_Smt3_likecoord: 21..94
e-value: 8.34687E-37
score: 116.944
IPR022617Rad60/SUMO-like domainPFAMPF11976Rad60-SLDcoord: 23..93
e-value: 2.1E-21
score: 75.5
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 5..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1840395..1840793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12865.t1Gvermi12865.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1840395..1840793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12865.t1 ID=Gvermi12865.t1|Name=Gvermi12865.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=99bp
MAEKAPEDSKANVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMD
AYCARMGTTKGAYRFLFDGHRINDEDTPESLDMQELDCVDAMVSQLGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR022617Rad60/SUMO-like_dom
IPR029071Ubiquitin-like_domsf