Gvermi12861.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12861.t1
Unique NameGvermi12861.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length239
Homology
BLAST of Gvermi12861.t1 vs. uniprot
Match: A0A2V3J1G6_9FLOR (Cyclin-U2-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1G6_9FLOR)

HSP 1 Score: 251 bits (641), Expect = 1.140e-80
Identity = 140/240 (58.33%), Postives = 174/240 (72.50%), Query Frame = 0
Query:    1 MALEQVTPEQ-IMEPPSAAHLLLLRPQFEPPSCSAADNYNSLYIVRALSDVLERTCQRNATCTLQPNPHIDARTTNIFYSCTVAPFSLSCYVYQLVTRLQLSRSVYVVALVFLDRVRLVDQRLCLIHLNVHRVLATALCLADKYLEDECHRNSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEYDSAVF---------SAHASEHVVHAQAAVALESAAFSAARTLSMMTSA 230
            MALE ++PEQ ++   SA+   +   +FEP S      Y+  YI  ALS+VL+RTC RN  C LQ NP +DAR+TN+FY+   APFSLSCYV+ L++RL+LSRSVYVVAL++LDRVRLVDQ+LCL H+NVHR+LATALCLADKY+EDE HRN+  C I G+  ++ELN+ME  FL R+QWNCWVS  TF EY+ A+F         S+ A     HA AAVAL +AA  AARTLSMMTSA
Sbjct:   19 MALEHLSPEQRVICSNSASVYAVHHAEFEP-SPQPTSAYSYAYIGEALSNVLQRTCDRNGGCVLQANPRLDARSTNMFYNSCAAPFSLSCYVFHLLSRLKLSRSVYVVALIYLDRVRLVDQKLCLTHMNVHRILATALCLADKYVEDESHRNNALCCIMGMSHVAELNAMEAAFLHRIQWNCWVSEHTFCEYEHALFGRNAPSPPHSSSAPAPADHAHAAVALHTAAVDAARTLSMMTSA 257          
BLAST of Gvermi12861.t1 vs. uniprot
Match: A0A1X6NWM5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWM5_PORUM)

HSP 1 Score: 99.8 bits (247), Expect = 2.420e-20
Identity = 54/117 (46.15%), Postives = 76/117 (64.96%), Query Frame = 0
Query:   75 NIFYSCTVAPFSLSCYVYQLVTRLQLSRSVYVVALVFLDRVRLVDQRLCLIHLNVHRVLATALCLADKYLEDECHRNSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEY 191
            +IF+S      S++ YV +L+  + +S SV++VALV+LDR+   D RL L  LN+HR+L  A+ LA K++ED  HRNS    + GIPS +E+N +E E LRRL W   VS D F+ Y
Sbjct:  440 SIFFSLVKPSVSVAFYVARLLRYVHVSPSVFIVALVYLDRLGAGDARLLLTPLNMHRLLLAAVTLASKFVEDRAHRNSWLARVGGIPSQTEMNRLEVETLRRLDWRLAVSPDVFDMY 556          
BLAST of Gvermi12861.t1 vs. uniprot
Match: A0A1X6NRH4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRH4_PORUM)

HSP 1 Score: 92.0 bits (227), Expect = 9.070e-18
Identity = 57/155 (36.77%), Postives = 85/155 (54.84%), Query Frame = 0
Query:   46 ALSDVLERTCQRNATCTLQPNPHIDARTTNIFYSCTVAPFSLSCYVYQLVTRLQLSRSVYVVALVFLDRVRLVDQRLCLIHLNVHRVLATALCLADKYLEDECHRNSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEYDSAVFSAHA 200
            A+S VL R    NA  +    P       + F+S +  PF+L  YV +LVT  + SRS YV A V+LDR+  V   L +  +NVHR+L +AL +A K L+D+ +  + +C + GIPS+ E  ++E   LR L +   V VD +  Y+  +  A A
Sbjct:  358 AISSVLGRWIDANAHASGHRPPPASDDPLSQFFSSSRQPFTLLYYVRRLVTHTRCSRSAYVAAFVYLDRLAAVAPALAVRSMNVHRLLLSALVVAVKVLDDDVYSAAYYCRVGGIPSVGEYVALEATLLRLLGFRVAVGVDVYHAYEKGILRAAA 512          
BLAST of Gvermi12861.t1 vs. uniprot
Match: A0A2V3IT02_9FLOR (Cyclin-P3-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT02_9FLOR)

HSP 1 Score: 83.6 bits (205), Expect = 2.100e-15
Identity = 56/160 (35.00%), Postives = 87/160 (54.37%), Query Frame = 0
Query:   37 NYNSLYIVRALSDVLERTCQRNATCTLQPNPHIDARTTNI-----FYSCTVAPFSLSCYVYQLVTRLQLSRSVYVVALVFLDRVRLVDQRLCLIHLNVHRVLATALCLADKYLEDECHRNSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEY 191
            ++N   +V AL   L   C RN        PH    TTN      F+S    PF L+ YV +LV     S S +++AL++L++V+ V  +L L  +N+HR+++TAL LA KYL+D+   N+ +  +AG+ + +E+N +E   L  L W   VS  TF  +
Sbjct:  117 DWNDDQLVSALCAHLSAVCHRNEQAA--DTPH----TTNSDKYHHFFSQYRQPFHLTFYVTRLVQYSNTSPSAFILALIYLEKVKSVAPQLALTDMNLHRLVSTALVLAIKYLDDQVFSNAYYARVAGVTT-AEINQLELSMLTLLNWQLSVSTSTFSAH 269          
BLAST of Gvermi12861.t1 vs. uniprot
Match: A0A7S1TIJ0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIJ0_9RHOD)

HSP 1 Score: 80.5 bits (197), Expect = 4.940e-15
Identity = 49/153 (32.03%), Postives = 90/153 (58.82%), Query Frame = 0
Query:   46 ALSDVLERTCQRNATCTLQPNPHIDARTTNIFYSCTVAPFSLSCYVYQLVTRLQLSRSVYVVALVFLDRVR-LVDQRLCLIHLNVHRVLATALCLADKYLEDECHRNSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEYDSAVFS 197
            +++  L+  C+ N    +   PH +  + ++FYS     FSL  YV +L+ R + SRS +V+AL++L RV+    ++  ++  NVHR+  TAL LA K+L++  + N  +  + G+ SL E+N +E E LR L ++ +VS D ++ + + + +
Sbjct:   40 SVTSALDYLCKSNEP--VGEVPH-ELDSASLFYSRASQSFSLDWYVERLIRRAECSRSAFVLALIYLLRVQDKGKEKYFVVERNVHRLFLTALVLAIKFLDEPIYDNGFYARVGGLSSLREMNDLEKEMLRVLNFDVFVSEDEYDYFKAMLLT 189          
BLAST of Gvermi12861.t1 vs. uniprot
Match: A0A5J4YXN5_PORPP (Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXN5_PORPP)

HSP 1 Score: 80.9 bits (198), Expect = 1.170e-14
Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 0
Query:   76 IFYSCTVAPFSLSCYVYQLVTRLQLSRSVYVVALVFLDRVRLVDQRLCLIHLNVHRVLATALCLADKYLEDECHRNSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEYDSAVFS 197
            IFYS     F+L  Y+ ++VT +  S S++++AL FL R R  D  L L   NVHR+  TA+ LA K LEDE + N  +  + G+PSL E+N +E + L++L ++  V    + E  + V +
Sbjct:  134 IFYSAQKQKFALVKYIQRVVTLVSGSSSIFILALCFLQRARKADTLLALHDYNVHRLWITAVVLASKMLEDEVYSNEHYAKMGGVPSLVEMNRLEAQLLKKLNFSLCVPETEYLEMRARVLA 255          
BLAST of Gvermi12861.t1 vs. uniprot
Match: A0A7S0T7Z7_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7Z7_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 2.380e-14
Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 0
Query:   77 FYSCTVAPFSLSCYVYQLVTRLQLSRSVYVVALVFLDRVRLVDQRLCLIHLNVHRVLATALCLADKYLEDECHRNSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEYDSAVFS 197
            FYS    PF +  YV +L   +  S S +++AL++LDRVR  +  L L  L+VHR++ TAL +A K+++D    N  +  + G+ S+ E+N +E  FL  L +  + S D F     AV +
Sbjct:  137 FYSIEAQPFPMEFYVQRLAKHMGCSSSAFIMALIYLDRVRRRNSLLQLSSLSVHRLVLTALVVAAKFVDDSVFENKWYAVVGGLESVQEMNKLERIFLGELDFRLYCSADEFNLTKEAVMA 257          
BLAST of Gvermi12861.t1 vs. uniprot
Match: A0A7S1T5I1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T5I1_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 8.080e-13
Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 0
Query:   44 VRALSDVLERTCQRNATCTLQPNPHIDARTTNIFYSCTVAPFSLSCYVYQLVTRLQLSRSVYVVALVFLDRVRLVDQRLCLIHLNVHRVLATALCLADKYLEDECHRNSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEYDSAVFSA 198
            VRAL+ +L   C  N       N       T +F+S       L+ YV +LV   + SRSV++VAL++L R+      L    LN+HR+L T + +A K++ED    N  F    G+ ++ E+N +E   L  L++  +VS + +E Y+  +  A
Sbjct:   80 VRALTKILSTLCTSNEDRIKLENVR---DVTRMFFSVRKPGIPLNTYVKRLVKHSRCSRSVFIVALIYLQRLEAAWPTLGATELNIHRLLTTCIMIAAKFVEDVHLNNLHFARAGGVSNVVEMNRLEATALALLKFQTFVSSEEYERYEKLLIRA 231          
BLAST of Gvermi12861.t1 vs. uniprot
Match: A0A7S0ZN83_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZN83_NOCSC)

HSP 1 Score: 73.2 bits (178), Expect = 1.110e-12
Identity = 34/115 (29.57%), Postives = 71/115 (61.74%), Query Frame = 0
Query:   84 PFSLSCYVYQLVTRLQLSRSVYVVALVFLDRVRLVDQRLCLIHLNVHRVLATALCLADKYLEDECHRNSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEYDSAVFSA 198
            P ++  Y+ ++    Q S   +V+ L+++DR+  +     + +LN+HR+L TA+ LA K+ +D  + N+ +  + G+ +++E+NS+E +FL+ + W  +V+   + +Y S VF+A
Sbjct:    9 PMTIHAYLTRIAKYFQCSNECFVLCLIYIDRIVKLRPEFTICNLNIHRLLMTAVMLAVKFFDDVYYNNAYYAKVGGV-NVTEVNSLEAQFLQLIDWRLYVTPQEYSQYRSHVFTA 122          
BLAST of Gvermi12861.t1 vs. uniprot
Match: A0A7S1EV20_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1EV20_NOCSC)

HSP 1 Score: 74.3 bits (181), Expect = 1.350e-12
Identity = 35/122 (28.69%), Postives = 74/122 (60.66%), Query Frame = 0
Query:   77 FYSCTVAPFSLSCYVYQLVTRLQLSRSVYVVALVFLDRVRLVDQRLCLIHLNVHRVLATALCLADKYLEDECHRNSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEYDSAVFSA 198
            F++    P ++  Y+ ++    Q S   +V+ L+++DR+  +     + +LN+HR+L TA+ LA K+ +D  + N+ +  + G+ +++E+NS+E +FL+ + W  +V+   + +Y S VF+A
Sbjct:   60 FHAVRQPPMTIHAYLTRIAKYFQCSNECFVLCLIYIDRIVKLRPEFTICNLNIHRLLMTAVMLAVKFFDDVYYNNAYYAKVGGV-NVTEVNSLEAQFLQLIDWRLYVTPQEYSQYRSHVFTA 180          
The following BLAST results are available for this feature:
BLAST of Gvermi12861.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1G6_9FLOR1.140e-8058.33Cyclin-U2-2 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A1X6NWM5_PORUM2.420e-2046.15Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NRH4_PORUM9.070e-1836.77Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3IT02_9FLOR2.100e-1535.00Cyclin-P3-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A7S1TIJ0_9RHOD4.940e-1532.03Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YXN5_PORPP1.170e-1437.70Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=3... [more]
A0A7S0T7Z7_9RHOD2.380e-1435.54Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S1T5I1_9RHOD8.080e-1331.61Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZN83_NOCSC1.110e-1229.57Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S1EV20_NOCSC1.350e-1228.69Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 72..180
e-value: 2.2E-17
score: 63.9
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 37..196
NoneNo IPR availableGENE3D1.10.472.10coord: 33..230
e-value: 1.3E-35
score: 124.9
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 93..174
e-value: 3.11225E-4
score: 36.8329
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 88..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1828333..1829049 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12861.t1Gvermi12861.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1828333..1829049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12861.t1 ID=Gvermi12861.t1|Name=Gvermi12861.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=239bp
MALEQVTPEQIMEPPSAAHLLLLRPQFEPPSCSAADNYNSLYIVRALSDV
LERTCQRNATCTLQPNPHIDARTTNIFYSCTVAPFSLSCYVYQLVTRLQL
SRSVYVVALVFLDRVRLVDQRLCLIHLNVHRVLATALCLADKYLEDECHR
NSTFCTIAGIPSLSELNSMEHEFLRRLQWNCWVSVDTFEEYDSAVFSAHA
SEHVVHAQAAVALESAAFSAARTLSMMTSATPTTLSDV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR013763Cyclin-like
IPR036915Cyclin-like_sf