Gvermi12856.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12856.t1
Unique NameGvermi12856.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length773
Homology
BLAST of Gvermi12856.t1 vs. uniprot
Match: A0A2V3IZX8_9FLOR (RNA helicase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZX8_9FLOR)

HSP 1 Score: 898 bits (2320), Expect = 0.000e+0
Identity = 495/689 (71.84%), Postives = 552/689 (80.12%), Query Frame = 0
Query:    9 LRTMAALRTAFAPALPLRTAPFVAASRRTCPPSIRRTCLVRSCAVAPTLASQSNGVAQTPD-------------APEPFAVLDTAAPPSXXXXXXXXXXXXXXXXXXXLSAXXDYSAPDTVPEPDD--RPTMSSFRLSAPTVERLAKNGIIHPTEVQAGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLAVLKQARKYDARHGPACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGVDVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFETLPPKDQRQVILFSATVPPWVKSLASQFQNDDVIVFDAVTSGSMAATTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXXGTAVVMYSDRESRNLRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVDERVLKHLLPRAAEIANRGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQALTPGAALRLIKELSRDAKLDGHVGLIRMCQDGSVVLDVGSEGSDELISTGEKVMAGTGLSLSLCTGVPVLRETERRRDDRR 682
            +R MAA R AF P+LPLR   F    R TCP S+ R   VRSCAVAPTL+S SNGVA                 A +P   LD     S                     A  +Y+A + VP+     +PTM    LS  T+ERL +NGI HPTEVQ GTFD LYDGKD+IAKSRTGTGKTLAFALPILERLA+LK    YD+R GPACIVLAPTRELAKQV+REM+YIG GL ISV+ VYGGS+Y PQE+ALR+GVDVVVGTPGRIMDHLDRGNLRL+N+AFAVLDEADEMLSMGF+ DVE+IFETLP  ++RQVILFSATVPPWVK LASQFQ  DV VFDA+TSG+MA+TTVRHCAVRVPEREEARASLLADIIAVHSPTK  N E    +TPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQ+QRE+TLSQFRNG+FQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXX GTAVV+YSDRESRNL+ LERDCKI+FDMEVAPAPE ALEAAVDVAL+N+ +V++RVLKHL+PRAAEI   GE+STE IAAILAIA RRVRLEDRSVLSGEKGMRT+HVKS     L PG ALRLIKEL+R  K+DG+VGLIR CQDGSVVLDV SEG D+L+  GE +M  TGL + LC+GVP+LR+ +RRRD+ R
Sbjct:    1 MRIMAAARPAFTPSLPLRVGLFT--PRLTCPISVLRPSHVRSCAVAPTLSSSSNGVAXXXXXXXXXXXXXXXXXAVQPLPALDDMLTTSSQHQP----------------AAAEYTASEPVPKSQTPTKPTMHDLTLSPVTIERLQRNGITHPTEVQVGTFDTLYDGKDVIAKSRTGTGKTLAFALPILERLAILKGEGNYDSRRGPACIVLAPTRELAKQVSREMAYIGAGLKISVECVYGGSSYTPQENALRKGVDVVVGTPGRIMDHLDRGNLRLANVAFAVLDEADEMLSMGFSTDVETIFETLPSPEERQVILFSATVPPWVKRLASQFQKKDVTVFDAITSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKT-NGEDGVKQTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQRQREITLSQFRNGKFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXSGTAVVLYSDRESRNLKTLERDCKIRFDMEVAPAPETALEAAVDVALANVGSVEDRVLKHLIPRAAEIVKGGEDSTEIIAAILAIASRRVRLEDRSVLSGEKGMRTVHVKSSEGVRLGPGTALRLIKELARHCKVDGNVGLIRTCQDGSVVLDVSSEGVDKLLEAGEGMMESTGLRVHLCSGVPMLRD-DRRRDNER 669          
BLAST of Gvermi12856.t1 vs. uniprot
Match: R7QI04_CHOCR (RNA helicase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI04_CHOCR)

HSP 1 Score: 750 bits (1936), Expect = 2.760e-262
Identity = 403/566 (71.20%), Postives = 470/566 (83.04%), Query Frame = 0
Query:  123 PTMSSFRLSAPTVERLAKNGIIHPTEVQAGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLAVLKQAR--KYDARHGPACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGVDVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFETLPPKDQRQVILFSATVPPWVKSLASQFQNDDVIVFDAVTSGSMAATTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXXGTAVVMYSDRESRNLRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVDERVLKHLLPRAAE-IANRGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQALTPGAALRLIKELSRDAKLDGHVGLIRMCQDGSVVLDVGSEGSDELISTGEKVMAGTGLSLSLCTGVPVLRETERR---RDDRR 682
            P + SFRLS  T++ L KN I H TEVQAGTFD L++GKD+IAKSRTGTGKTLAF LPI+ERLA++++ R        GP CIVLAPTRELAKQV+REMS++G GL +SV+  YGG  YGPQE+ALRRGVDVVVGTPGRIMDHL++GNLRL NI+FAVLDEADEMLSMGFAQDVE+IFETLPP+++RQVILFSATVP WVK+LASQFQ  DV+ FDAVTSGSMA+TTVRHCAVRVPER+EARA LLAD+IAVHS  + E+    G   PSR IVFT+TKREAD+LATSG+LDGCGAAVLHGDVSQKQREVTLSQFR G+FQVLVATDVAARGLDISGVDVV+QYRVP D+ESYIHRAGRT XXXXX TAVVMYSDRESRNLR LER+C+I+FDMEVAPAPE ALEAAV+VAL NI  VDERV+KHLLPRA E +A+  E++ E +AAILAIA RR RLEDRS+LSGEKGMRT+ V  +R   ++PG A+R I +L+R A+ +  VGLIRMC+DGS V+DV S+ +  L+   EK+     + L + +GVP L+E ERR   R DRR
Sbjct:    3 PPLESFRLSPRTIQMLKKNDITHTTEVQAGTFDLLFEGKDIIAKSRTGTGKTLAFGLPIMERLAIIRKERGGPKPRGEGPGCIVLAPTRELAKQVSREMSHLGQGLGLSVECFYGGVGYGPQENALRRGVDVVVGTPGRIMDHLNKGNLRLDNISFAVLDEADEMLSMGFAQDVETIFETLPPENERQVILFSATVPRWVKNLASQFQKKDVVTFDAVTSGSMASTTVRHCAVRVPERDEARAGLLADVIAVHSQGRCEDTIKRG---PSRAIVFTETKREADELATSGSLDGCGAAVLHGDVSQKQREVTLSQFRQGQFQVLVATDVAARGLDISGVDVVIQYRVPNDAESYIHRAGRTXXXXXXXTAVVMYSDRESRNLRNLERECRIRFDMEVAPAPETALEAAVNVALDNISGVDERVIKHLLPRAEEMLASGAEDTAEKLAAILAIAGRRTRLEDRSILSGEKGMRTVVVSGERE--ISPGLAMRFISDLARAAETESRVGLIRMCRDGSAVVDVISDAALGLVGASEKLGEDAEIKLRVASGVPQLKEIERRGGGRFDRR 563          
BLAST of Gvermi12856.t1 vs. uniprot
Match: A0A1X6NKY3_PORUM (RNA helicase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKY3_PORUM)

HSP 1 Score: 564 bits (1453), Expect = 6.050e-190
Identity = 307/496 (61.90%), Postives = 369/496 (74.40%), Query Frame = 0
Query:  147 TEVQAGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLAVLKQARKYDAR-HGPACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGVDVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFETLP-PKDQRQVILFSATVPPWVKSLASQFQNDDVIVFDAVTSGSMAATTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXXGTAVVMYSDRESRNLRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVDERVLKHLLPRAAEIANRGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQALTPGAALRLIKELSRDAKLDGHVGLIRMCQDG-SVVLDV 639
            TEVQAGTFD LY+GKD+IA+SRTGTGKTLAF LP+LERLA  K A +  +R   P  +VLAPTRELAKQV+REM+  G  L +SV+  YGGSAYGPQE ALRRGVD+VVGTPGR+MD LDR  L LS + FAVLDEADEMLSMGFA DVE +F +   P+++RQ++LFSATVP WVK LASQ Q  DV+ FD++  G M ATTV+H AV+VPERE ARA LLADI+AV+          NGV    R IVF +TKRE D+LATSGAL+GCGAAVLHGDV+QKQRE+TL+QFR+GRF VLVATDVAARGLDI+ V+VVVQYRVP D+E+Y+HRAGRTG     G AVVMYSDR+  +LR LERDC IKF+   +PAPE ALEAA   A + +  VD  V+KHLLP A  + +  ++     AA LA+A RR R+ +RS+LSGE  M+TL V   R  AL+P  ALR +  L+  A  D  VG+IR+  DG S V+DV
Sbjct:    2 TEVQAGTFDTLYEGKDMIARSRTGTGKTLAFTLPLLERLAAYKAANRGASRSRAPLALVLAPTRELAKQVSREMALTGAPLRVSVECFYGGSAYGPQEGALRRGVDIVVGTPGRLMDLLDRRILDLSAVRFAVLDEADEMLSMGFADDVEHLFSSFVLPREERQIVLFSATVPSWVKRLASQHQKSDVVSFDSIGRGDMTATTVKHYAVKVPERESARAGLLADILAVYG---------NGVGG-GRAIVFAETKRECDELATSGALEGCGAAVLHGDVTQKQREMTLAQFRSGRFAVLVATDVAARGLDINNVEVVVQYRVPSDAEAYVHRAGRTGRAGASGVAVVMYSDRDGGSLRRLERDCGIKFERAGSPAPEVALEAAATAAAAALHGVDAAVVKHLLPTAKGLMDSVDDPAAAFAACLAVAGRRTRMVERSLLSGESDMKTLLVAGGRGGALSPAMALRYVAGLAEAAGQDATVGMIRVAADGRSAVVDV 487          
BLAST of Gvermi12856.t1 vs. uniprot
Match: A0A1X6NYZ2_PORUM (RNA helicase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYZ2_PORUM)

HSP 1 Score: 561 bits (1446), Expect = 4.010e-186
Identity = 319/564 (56.56%), Postives = 393/564 (69.68%), Query Frame = 0
Query:  120 DDRPT-MSSFRLSAPTVERLAKNGIIHPTEVQAGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLAVLKQARK-----YDARHGPACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGVDVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFETLPPKD-QRQVILFSATVPPWVKSLASQFQNDDVIVFDAVTSGSMAATTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXXGTAVVMYSDRESRNLRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVDERVLKHLLPRAAEIANRGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQALTPGAALRLIKELSRDAKLDGH--VGLIRMCQDG-SVVLDVGSEGSDELISTGEKVMAGTGLSLSLCTGVPVLRE 673
            D++P  +SS+R++   V+ LA  GI H T+VQAGTFD LY+G+D+IA+SRTGTGKTLAFALPILERLA  K A       Y       C+VLAPTRELA QVAREM+  G  L ISV+  YGG++YG Q  ALRRGVDVVVGTPGR+MD +DRG++ LS++ FAVLDEADEMLSMGFA+DVE +F      + +RQ +LFSATVP WVK LASQ Q  DVI +D+V  G M A  VRH AVRVP+R+  RASLLAD++AV+          +G     R IVFT+TKRE D+LA SGAL+GCGAAVLHGDVSQKQREVTL+QFR+GRF VLVATDVAARGLDISGV+VVVQYR+P D+E+Y+HRAGRTG     G +VV++SDRE+  LR LERD  +KF+   APAPEAAL+AA     + +  VD  V+ HLLP A E+  + +      AA +A+A RR +LE RSVLSGE G R L V       LTP   +R +  L+R   +D    VG+IR+C DG S V+D G+  +D L     K  +   LSL L T +P L+E
Sbjct:  145 DEKPNALSSYRITPAVVDNLANRGITHMTDVQAGTFDLLYEGRDMIARSRTGTGKTLAFALPILERLAASKAADGSAGGGYRRGAKTRCLVLAPTRELANQVAREMTLTGKPLRISVECFYGGASYGAQVSALRRGVDVVVGTPGRVMDLMDRGDMDLSDVEFAVLDEADEMLSMGFAEDVERVFGAFSRTEMERQTVLFSATVPSWVKKLASQHQKRDVITYDSVGKGDMTAVNVRHVAVRVPDRDSTRASLLADVLAVYG-------SGHG---GGRAIVFTETKRECDELAASGALEGCGAAVLHGDVSQKQREVTLAQFRSGRFAVLVATDVAARGLDISGVEVVVQYRLPSDTEAYVHRAGRTGRAGASGVSVVLHSDREAGGLRRLERDVGLKFERTSAPAPEAALDAAAMHVSAAMKDVDAAVVAHLLPTAKEVLAQYKHPIAAFAACMALAGRRTKLEYRSVLSGESGKRALLVSGT--IPLTPAVVVRFVSRLARKIGVDDELEVGMIRVCADGRSAVVDTGAAAADALAKAAVKHNSDE-LSLKLATELPPLQE 695          
BLAST of Gvermi12856.t1 vs. uniprot
Match: A0A7S1TKV5_9RHOD (RNA helicase (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKV5_9RHOD)

HSP 1 Score: 495 bits (1274), Expect = 1.590e-161
Identity = 289/542 (53.32%), Postives = 374/542 (69.00%), Query Frame = 0
Query:  116 VPEPDDRPTMSSFRLSAPTVERLAKNGIIHPTEVQAGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLAVLKQARK----YDAR--HGPACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGVDVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFETLPPKDQRQVILFSATVPPWVKSLASQFQNDDVIVFDAVTSG-SMAATTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXXGTAVVMYSDRESRNLRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVDERVLKHLLPRAAEIANRGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQALTPGAALRLIKELSRDAKLDGHVGLIRMCQDGSV-VLDVGSEGSDELIS 649
            V E D     S++R+S  TVE L K GI   T+VQ GT+D LYDG+D+IA+SRTGTGKTLAFA+PILERL  +K +++      AR   GP+CI+LAPTRELA QV+RE+  +     +  +  YGGS+Y  QE AL+RG+D +V TPGR++DHL R N+    + F VLDEADEMLSMGFA++V+ + ++LPPK+ RQ ILFSATVP WVK++A Q Q D V+ FDAV  G SMAATTVRHCAV  P   E RA+ L D+I V+           G  +  R IVFTQTKREAD+LATSG L   GAAVLHGDV+Q QRE TL+QFR GRFQVLVATDVAARGLDI+GVD+VVQ+RVPLD+ESY+HRAGRTGXXXXXGTAV+MYS  E R+LR L  D  +KF+    P+ E  L  A + A S+I  VD +V  +   RAAE    GE   + +AA LA+  RR  + +RS+L+G+   +TL +K+  R+ LT G+ +RL+ +L+    L   VG + +C D ++ V D+  E ++ L++
Sbjct:  116 VEEGDMAHKFSAYRISPLTVELLHKKGIETMTDVQYGTYDHLYDGRDIIARSRTGTGKTLAFAVPILERLVAMKGSKEDKHGVGARSGRGPSCIILAPTRELALQVSREIDSLAKPHGLETECFYGGSSYNVQERALQRGIDFLVATPGRLIDHLQRNNIDCGGVRFFVLDEADEMLSMGFAENVDQVLDSLPPKEARQTILFSATVPSWVKNIARQHQRDPVM-FDAVGEGVSMAATTVRHCAVLTPRDFEPRAAFLDDVITVYG----------GGFSAGRAIVFTQTKREADELATSGVLKS-GAAVLHGDVTQSQRETTLAQFRAGRFQVLVATDVAARGLDITGVDLVVQFRVPLDTESYVHRAGRTGXXXXXGTAVIMYSQDEMRSLRKLAMDTGVKFERHGLPSIEKVLTIAAEHAKSSIDDVDSKVSAYFA-RAAEELLAGENVRDRVAAALALISRRREIVERSILTGQADYKTLLIKA--REPLTVGSVVRLVSQLAEKLGLTISVGRVSLCADNTMAVFDLTLEEAEALLN 642          
BLAST of Gvermi12856.t1 vs. uniprot
Match: A0A5J4YW05_PORPP (RNA helicase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW05_PORPP)

HSP 1 Score: 489 bits (1259), Expect = 9.630e-159
Identity = 278/532 (52.26%), Postives = 363/532 (68.23%), Query Frame = 0
Query:  126 SSFRLSAPTVERLAKNGIIHPTEVQAGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLAVLKQARKYDAR------HGPACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGVDVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFETLPPKDQRQVILFSATVPPWVKSLASQFQNDDVIVFDAVTSG-SMAATTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXXGTAVVMYSDRESRNLRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVDERVLKHLLPRAAEIANRGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQALTPGAALRLIKELSRDAKLDGHVGLIRMCQDGSV-VLDVGSEGSDELIS 649
            +++R+S   V +L +  I   TEVQ GTFD +YDG+D+IA+SRTGTGKTLAF LPI+E+LA +    +           GPAC++LAPTRELA QVARE+  I     +S +  YGGS YG QE ALRRG+D++VGTPGR +DHL+RG+L++  + F VLDEADEMLSMGFA+DV+ + + LPPK+QRQ ILFSATVP WVK +A + Q + V+ FDA+  G S AATTVRHCAV+VP   EARA+ L DI+ V            G     R IVFTQTKREAD+LATSGAL   GAAVLHGDV+QKQRE TL QFR GRF VLVATDVAARGLDISGVD+VVQ+RVP+D+ESY+HR+GRTGXXXX GTAV+MYS  E R LR L  D  +KF+    P+ E  L    D+A ++I  VD +V+ +   +A  + N  E + + +A  LA+  RR  + +RS+L+G+   +T+ +K+  R+ L     LR +  L+    L   +G + +CQD ++ V D+  E +D L+S
Sbjct:  156 ANYRVSPKVVAKLTEKNIFEMTEVQYGTFDSVYDGRDMIARSRTGTGKTLAFGLPIIEKLASIMGTDEDTTGIGRTPGRGPACVILAPTRELASQVARELDDIARIHGMSTECFYGGSPYGAQESALRRGIDILVGTPGRTIDHLNRGSLKMDTVRFMVLDEADEMLSMGFAEDVDVMMDFLPPKEQRQTILFSATVPSWVKKIADKHQKNPVM-FDAIGRGESSAATTVRHCAVQVPRDFEARAAFLDDIVTVFG----------GGFGGGRAIVFTQTKREADELATSGALKA-GAAVLHGDVTQKQRENTLQQFRQGRFAVLVATDVAARGLDISGVDLVVQFRVPMDTESYVHRSGRTGXXXXSGTAVIMYSQDEMRALRKLAMDTGVKFERHGLPSTEKVLSVCADLAAASIDEVDLKVVDYFREQAEMLVN-SENAVDRMAKALALISRRREIVERSILTGQTDQKTMLIKA--REPLAVPVVLRTVSRLAESFGLRVDLGRVSLCQDPTMAVFDMPVEQADALLS 672          
BLAST of Gvermi12856.t1 vs. uniprot
Match: A0A7S0G6K6_9RHOD (RNA helicase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6K6_9RHOD)

HSP 1 Score: 469 bits (1207), Expect = 3.180e-152
Identity = 264/558 (47.31%), Postives = 364/558 (65.23%), Query Frame = 0
Query:  121 DRPTMSSFRLSAPTVERLAKNGIIHPTEVQAGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLAVLKQARKYDAR----HGPACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGVDVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFETLPPKDQRQVILFSATVPPWVKSLASQFQNDDVIVFDAV-TSGSMAATTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXXGTAVVMYSDRESRNLRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVDERVLKHLLPRAAEIANRGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQALTPGAALRLIKELSRDAKLDGHVGLIRMCQ-DGSVVLDVGSEGSDELISTGEKVMAGTGLSLSLCTGVPVLR 672
            + P +    L+   + +L + GI   T VQ GT  ++ +G+D+IA+SRTGTGKTLAF LPI+ERL+ ++             GP+CI+LAPTRELAKQVA E+ Y+G  L I     YGG +Y  QE A+ RG+DV+VGTPGRI+DHL++GNL LS + F VLDEADEMLSMGFA D+E IF+ LPP+++RQ ILFSATVP WVK++A Q Q +  + +DA+    +  ATTVRHCA+RVPE + +R + L DII  +           G  T SR +VFTQTK+EAD+L TSG + G GAAVLHGDVSQ+QRE+TL+ FR+GRF VLVATDVAARGLDI+G+D+VVQ+ VP D +SYIHRAGRTG     G A++++SDRE+  LR +ER C IK +    P+    LEA+   A + +  V+E V+K+ + +A+E+    E+    +AA LA+  RR + ++RS+L+G    RTL   +  + ALTP   LR+I++ S  +      G I +C+ D   V D   E  D L+    ++    G+ + +   +P L+
Sbjct:   75 ETPMVVDTGLNERIISKLQEKGITQLTAVQGGTLMQILNGRDIIARSRTGTGKTLAFGLPIVERLSQMRDDSSSPVGKKRGRGPSCIILAPTRELAKQVAAELDYVGSPLRIRTDCFYGGVSYSIQESAISRGIDVLVGTPGRIIDHLEKGNLDLSGVKFGVLDEADEMLSMGFADDIERIFDYLPPREERQTILFSATVPSWVKTIAKQHQKEPYL-YDAIGREQNKTATTVRHCAIRVPEGD-SRGAFLDDIITTYG----------GAMTQSRCLVFTQTKKEADELVTSGVIQG-GAAVLHGDVSQRQREITLAHFRDGRFPVLVATDVAARGLDITGIDIVVQFSVPQDIDSYIHRAGRTGRAGRSGIAILLHSDRENDQLRRVERACGIKLERHGPPSAAKVLEASAQQASACLQEVEENVIKYFVGKASELIE-DEDPKLVLAAALALVARRPKFQERSILTGLTEYRTLSATT--KFALTPPDILRIIRKASSISGCSTKAGKIVICENDAQAVFDYPVEEVDLLLEGAAELK---GIEIEVLNDLPRLK 613          
BLAST of Gvermi12856.t1 vs. uniprot
Match: A0A7S1TCK2_9RHOD (RNA helicase (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCK2_9RHOD)

HSP 1 Score: 470 bits (1210), Expect = 1.410e-151
Identity = 278/543 (51.20%), Postives = 361/543 (66.48%), Query Frame = 0
Query:  114 DTVPEPDDRPTM--SSFRLSAPTVERLAKNGIIHPTEVQAGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLAVL-KQARKYDAR---HGPACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGVDVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFETLPPKDQRQVILFSATVPPWVKSLASQFQNDDVIVFDAVTSGSMAATTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXXGTAVVMYSDRESRNLRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVDERVLKHLLPRAAEIANRGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQALTPGAALRLIKELSRDAKLDGHVGLIRMCQDGSV-VLDVGSEGSDELIS 649
            DT  E  +R  M   ++RLS  T++ L   GI H TEVQ GTFD +YDG+DLIA+SRTGTGKT AF LPILE+L  L K       R    GPA +VLAPTRELA+QVARE+  +   L + V+ VYGG++   Q  +LR GVD++VGTPGRI+DHL + +L +S + F VLDE+DEMLSMGFA DVE+I + +PP  +RQ +LFSATVPPWVK LA ++QN   + FD+V  G  AATTVRHCAV VP   EAR   L DII+V+           GV   +R IVFTQ KREAD+LATSGAL   GAAVLHGD+SQ QRE+TL QFR+GRF VLVATDVAARGLDI+GVD+V+Q+RVP D +SYIHRAGRT XXXXX TAV+MYS  E+  L+  ER C++ F+    P  E  L A    A S +  VDE+V  +  P A ++   G +  + +A  +A+  R+  + +RSV++GE   +TL V+S     L P   LR+I  ++ D  +   +G I +C D  + V D+ ++ +D L++
Sbjct:  144 DTEIEDPERIKMRIENYRLSPSTIKVLHDKGITHLTEVQQGTFDLIYDGRDLIARSRTGTGKTFAFGLPILEQLGRLAKDPESPIGRLRGRGPASVVLAPTRELAQQVARELGDVAKPLGLQVECVYGGASMQAQLASLRNGVDILVGTPGRIIDHLTQRSLDVSGVKFLVLDESDEMLSMGFADDVETIMKGMPPSGERQTVLFSATVPPWVKDLARKYQNKPAM-FDSVRGGVKAATTVRHCAVLVPREMEARMGFLEDIISVYG---------GGVGR-TRSIVFTQRKREADELATSGALK-FGAAVLHGDISQHQREITLQQFRDGRFAVLVATDVAARGLDITGVDLVIQFRVPEDPDSYIHRAGRTXXXXXXXTAVIMYSPDETAMLKRTERACQVTFEKSGPPGVEKVLAACAVNAASALEEVDEKVRSYFRPAAEDLLKAGLDPADALAGAMALITRKTSVVERSVITGEMDKQTLLVRSSG-AFLNPPKVLRMISRMAEDGGISIKIGKIVICDDPLLAVFDLNAKQADMLLN 673          
BLAST of Gvermi12856.t1 vs. uniprot
Match: M1UPQ0_CYAM1 (RNA helicase n=2 Tax=cellular organisms TaxID=131567 RepID=M1UPQ0_CYAM1)

HSP 1 Score: 442 bits (1138), Expect = 3.060e-141
Identity = 257/534 (48.13%), Postives = 342/534 (64.04%), Query Frame = 0
Query:  124 TMSSFRLSAPTVERLAKNGIIHPTEVQAGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLA---VLKQARKYDARHGPACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGVDVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFETLPPKDQRQVILFSATVPPWVKSLASQFQNDDVIVFDAVTSGSMAATTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLA-TSGALDGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXXGTAVVMYSDRESRNLRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVD-ERVLKHLLPRAAEIANRGEE--STETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQALTPGAALRLIKELSRDAKL-DGHVGLIRMCQDG-SVVLDVGSEGSDELI 648
            ++  F LS  T   L K GI   TE+QA TF+ +  G+D+I +S TGTGKT AF +P++ER+    V   +R+      P  +VL PTRELAKQV  ++  IG    ++V   YGG++Y  QE+ALRRG DV+VGTPGRI+DHLDRG L LSNI  AVLDEADEMLS+GFA+DVE IF+ +PPK++RQ +LFSAT+PPWV+ +A+Q Q   V+      + + AA  VRH AVRVP+ + AR ++L DI+  H+ T ++           R IVFT TKREAD++A T+       A VLHGDVSQ+QRE+TL QFR+GRF +LVATDVAARGLDI  VDV+VQ R P D ++YIHRAGRTG XXX GTAV+MYSD E   LR LER   I+F+    P  E  L+ A   A   +      RV+ +    A E+A    E  +   +AA LA+   R  +E RS+L+GE G+RTL +  +R   +TP   L +++ LS+  KL    +G +R+C+D    V DV  E +DE++
Sbjct:  103 SLERFPLSEATAAALRKKGITELTEIQAITFNDMRSGRDVIGRSHTGTGKTFAFGVPLVERMVEARVSNGSRRGAPGRSPCALVLTPTRELAKQVTEQLRLIGQPHGLAVDCFYGGASYTQQEEALRRGFDVLVGTPGRILDHLDRGTLNLSNIRIAVLDEADEMLSLGFAEDVERIFQKMPPKEERQTVLFSATIPPWVQKIAAQHQRAPVVHDVVGRTETRAAKNVRHVAVRVPDADFARFAMLEDIVFAHAETGNQ-----------RCIVFTDTKREADEIAMTASIFRSSVAQVLHGDVSQRQRELTLQQFRDGRFSILVATDVAARGLDIHEVDVIVQMRPPRDVDTYIHRAGRTGRXXXSGTAVIMYSDSERGLLRALERGASIRFEQAGPPTLERVLDVAAQNAARAVGEASTNRVVPYFQRAADELAAAQFEGDARRALAAALAVISGRTHIEHRSLLTGEAGLRTLLLTMNR-AGVTPRDVLGIVRRLSQSGKLFTDDIGKVRLCRDPRQAVFDVSVEAADEIL 624          
BLAST of Gvermi12856.t1 vs. uniprot
Match: A0A7J7ISJ6_9RHOD (RNA helicase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ISJ6_9RHOD)

HSP 1 Score: 434 bits (1116), Expect = 4.150e-138
Identity = 255/530 (48.11%), Postives = 346/530 (65.28%), Query Frame = 0
Query:  125 MSSFRLSAPTVERLAKNGIIHPTEVQAGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLAVLKQARKYDARHGPACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGVDVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFETLPPKDQRQVILFSATVPPWVKSLASQFQNDDVIVFDAVTSGSMAATTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGAL-DGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXXGTAVVMYSDRESRNLRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVD-ERVLKHLLPRAAEIANRGEE--STETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQALTPGAALRLIKELSRDAKL-DGHVGLIRMCQDG-SVVLDVGSEGSDELI 648
            +  F LS+ T   L + GI   TE+QA TFD + +G D+I +S TGTGKT AF +P++ERLA  +   +      P+ +VL PTRELAKQV  ++  IG   ++ V+  YGG++YGPQEDAL+RG+D+VVGTPGRI+DH++R  L LS +  A+LDEADEMLSMGFA+DVE IF  +P K++RQ +LFSATVPPWV+ +A+Q Q   VI      + + AA  VRH AVRVPE + AR ++L DII  H+ + ++           R IVFT TKREAD++A +G++  G  A VLHGDVSQ+QRE+TL QFR+GRF VLVATDVAARGLDI  VDVVVQ R P D+++YIHR+GRT XXXXX TAV MYSD E   LR LER   I+F+    P  E  L+ A   A   +      +V+ H    A E+A    E  +   +AA LA+   R  +E RS+L+GE G+RTL +  ++ + ++P   L +++ LS+  KL    +G +R+C++    V DV  E +DE++
Sbjct:  103 LERFPLSSGTAAVLRERGITELTEIQALTFDDMRNGLDVIGRSHTGTGKTYAFGVPMVERLAAARGGERGARGRPPSALVLTPTRELAKQVTEQLRQIGQPHDLRVECFYGGASYGPQEDALQRGLDIVVGTPGRILDHIERNTLDLSQVRIAILDEADEMLSMGFAEDVERIFNEMPSKNERQTVLFSATVPPWVQKIAAQHQRTPVIHDVVGKTETRAAKNVRHVAVRVPEADFARLAMLEDIIFAHAGSGNQ-----------RCIVFTGTKREADEIAMAGSIFRGSVAQVLHGDVSQRQRELTLQQFRDGRFSVLVATDVAARGLDIHEVDVVVQLRPPRDADTYIHRSGRTXXXXXXXTAVTMYSDAERGLLRSLERGASIRFEHVGPPTLERVLDVAAQNAARAVGEASTNQVVPHFQQAADELATVQFEGDARRALAAALAVISGRTHIEHRSLLTGEIGLRTLLLTLNQPE-ISPRDVLGIVRRLSQGGKLFSDDIGKVRLCRNPRQAVFDVSVESADEIL 620          
The following BLAST results are available for this feature:
BLAST of Gvermi12856.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZX8_9FLOR0.000e+071.84RNA helicase n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QI04_CHOCR2.760e-26271.20RNA helicase n=1 Tax=Chondrus crispus TaxID=2769 R... [more]
A0A1X6NKY3_PORUM6.050e-19061.90RNA helicase n=1 Tax=Porphyra umbilicalis TaxID=27... [more]
A0A1X6NYZ2_PORUM4.010e-18656.56RNA helicase n=1 Tax=Porphyra umbilicalis TaxID=27... [more]
A0A7S1TKV5_9RHOD1.590e-16153.32RNA helicase (Fragment) n=1 Tax=Erythrolobus austr... [more]
A0A5J4YW05_PORPP9.630e-15952.26RNA helicase n=1 Tax=Porphyridium purpureum TaxID=... [more]
A0A7S0G6K6_9RHOD3.180e-15247.31RNA helicase n=1 Tax=Rhodosorus marinus TaxID=1019... [more]
A0A7S1TCK2_9RHOD1.410e-15151.20RNA helicase (Fragment) n=1 Tax=Compsopogon caerul... [more]
M1UPQ0_CYAM13.060e-14148.13RNA helicase n=2 Tax=cellular organisms TaxID=1315... [more]
A0A7J7ISJ6_9RHOD4.150e-13848.11RNA helicase n=1 Tax=Cyanidiococcus yangmingshanen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 142..349
e-value: 7.8E-52
score: 188.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 154..334
score: 31.446125
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 403..484
e-value: 6.2E-31
score: 118.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 388..484
e-value: 7.2E-28
score: 97.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 380..525
score: 22.001385
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 147..322
e-value: 2.6E-46
score: 157.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 109..335
e-value: 2.1E-72
score: 245.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 347..571
e-value: 1.1E-46
score: 161.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 199..501
IPR012562GUCTPFAMPF08152GUCTcoord: 577..671
e-value: 9.4E-8
score: 32.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..718
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..772
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 734..772
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 121..638
NoneNo IPR availablePANTHERPTHR47958:SF24DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21coord: 121..638
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..772
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 348..493
e-value: 4.06194E-47
score: 161.521
NoneNo IPR availableCDDcd00268DEADccoord: 134..334
e-value: 4.24543E-89
score: 276.63
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 278..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1819227..1821545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12856.t1Gvermi12856.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1819227..1821545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12856.t1 ID=Gvermi12856.t1|Name=Gvermi12856.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=773bp
MSALRLATLRTMAALRTAFAPALPLRTAPFVAASRRTCPPSIRRTCLVRS
CAVAPTLASQSNGVAQTPDAPEPFAVLDTAAPPSPDAAAAAEATEAAAPP
PPELSAPADYSAPDTVPEPDDRPTMSSFRLSAPTVERLAKNGIIHPTEVQ
AGTFDKLYDGKDLIAKSRTGTGKTLAFALPILERLAVLKQARKYDARHGP
ACIVLAPTRELAKQVAREMSYIGGGLNISVQVVYGGSAYGPQEDALRRGV
DVVVGTPGRIMDHLDRGNLRLSNIAFAVLDEADEMLSMGFAQDVESIFET
LPPKDQRQVILFSATVPPWVKSLASQFQNDDVIVFDAVTSGSMAATTVRH
CAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKR
EADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGRFQVLVATDVAA
RGLDISGVDVVVQYRVPLDSESYIHRAGRTGRAGRSGTAVVMYSDRESRN
LRGLERDCKIKFDMEVAPAPEAALEAAVDVALSNICTVDERVLKHLLPRA
AEIANRGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHVKSDRRQ
ALTPGAALRLIKELSRDAKLDGHVGLIRMCQDGSVVLDVGSEGSDELIST
GEKVMAGTGLSLSLCTGVPVLRETERRRDDRRRDGRFRDDRRGDDRRRDE
RRGYSRGGGRRESMPRGGSRRDSYGSSYSNSGGYRRDGRDRGGYGGRNRP
ERFERRDGARQRRSADFLSDDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR012562GUCT
IPR000629RNA-helicase_DEAD-box_CS