Gvermi12841.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12841.t1
Unique NameGvermi12841.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length115
Homology
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BLAST of Gvermi12841.t1 vs. uniprot
Match: A0A2V3J009_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J009_9FLOR)

HSP 1 Score: 120 bits (302), Expect = 8.420e-33
Identity = 69/103 (66.99%), Postives = 73/103 (70.87%), Query Frame = 0 
Query:    1 LSALPVGSIIAAGVSMGILAATFENMLNVLHKRRGVV-ISDDELCAYCSGFGNVRCEVCNSRGAVFVGVTYFQRVCPACNGKKREKCRRCAGSGKSGMKKSQI 102
            LS LPVGSIIAAGVS+GIL ATFENMLNVL+    V   SDDELC  CSGFG VRCEVCNSRGAVFVG T FQRV               AGSGK+GMKKS +
Sbjct:   43 LSVLPVGSIIAAGVSIGILGATFENMLNVLYNHNRVRDSSDDELCPNCSGFGTVRCEVCNSRGAVFVGGTSFQRVXXXXXXXXXXXXXXXAGSGKTGMKKSMV 145
The following BLAST results are available for this feature:
BLAST of Gvermi12841.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J009_9FLOR8.420e-3366.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.230.10coord: 31..98
e-value: 5.6E-5
score: 25.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
NoneNo IPR availableTMHMMTMhelixcoord: 4..23
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 37..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1769953..1770494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12841.t1Gvermi12841.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1769953..1770494 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12841.t1 ID=Gvermi12841.t1|Name=Gvermi12841.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=115bp
LSALPVGSIIAAGVSMGILAATFENMLNVLHKRRGVVISDDELCAYCSGF
GNVRCEVCNSRGAVFVGVTYFQRVCPACNGKKREKCRRCAGSGKSGMKKS
QIQLEEQPSDQSLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf