Gvermi12840.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12840.t1
Unique NameGvermi12840.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length613
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi12840.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 110..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..333
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..612
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..22
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1767021..1768859 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12840.t1Gvermi12840.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1767021..1768859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12840.t1 ID=Gvermi12840.t1|Name=Gvermi12840.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=613bp
MIPRIEACLLLFSFYVVTVVVTVSRPVALGVLEPNANHVSPVWPEVPRLK
PHDPTHLDLLRAAAKAQFSLTRLDEVSIHNDKKKKKKASKGKKKGKGKKN
DSKKKGKGKRNDSKKKNRQAKKKRAQNQKNKNNRRRHRPRPRTRSKSLKF
KPWTGCKTERRSCGKSCGQKQKSKCKVTVSSPRLCMSQVKEKYACAGQRV
AMCQGEEKEAAICTKLESKTMPCDMKLPDPKKVCKRRTVSVKCVPKICAT
YDRIPCKYKTVLQPCDRPSKKCNDCVGRYKLRQCSKTYNRDVEVECPPEL
LRNVTTAETAQSSPAASPSVPVSPTPSATPRPFEDSNVYASNARCLASLF
DEEECRYADRKCQLFSDWFDSTVCAVQVCEDCRQLRYMSVTPGLKRYCFE
LLQSSCRTLYSIHQVAIYRIQVPAEPESLSVTARTSNIKFNPVDGKCYKP
ESKTVSAPCNVPLPPNKSCINRCIVGTCERRIAKGRCRGNLPDKCKKPRK
CKKTETACSYVTEDLGMCEYKVPVEYVCYKKKKVSHPCFFSSRLSVLGNN
ILPTNLLQPPKKSADLVNNMPKLCTRFVSKKHLCGSMKKTLWAQCQQKGC
RKKNCIKEICRK*
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