Gvermi12837.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12837.t1
Unique NameGvermi12837.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length199
Homology
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BLAST of Gvermi12837.t1 vs. uniprot
Match: A0A2V3IZY6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZY6_9FLOR)

HSP 1 Score: 212 bits (540), Expect = 4.560e-66
Identity = 99/198 (50.00%), Postives = 139/198 (70.20%), Query Frame = 0 
Query:    1 MRALTSDVQAFVEPTGCLGECGNGPNVAVETSDRVHVSIEKHIDSVNEAVRLLRRLKFDVNEEVLRVAVEKEKGDNLMLKGTEGEAGEHYEKAIGILECAEFSCNKWTEEYKIAILCNWAQSAVKISAYEKALLLVNKIIDVHPDYAAAWKWKAQAHDGMRQLDMAKQCWGMWGSLSGKTDEAQKQINRLTGWRGWFL 198
            +RA+  + + ++ P GCLGECGNGPNV V+T + +   ++ HI S+N+AV LL +L+F V+E++L  A EKE+GD+L+    E +A  HYEKA+  +   + S     +++ IAILCN AQS+V  SAY KAL LVN +I++ P  A+AWKWKA+AH+G+R  +MA   W MWG LSGK DEA+KQI+R TGWR + L
Sbjct:   58 LRAIVPESEPYIIPAGCLGECGNGPNVVVDTHEPMGAYVQTHISSLNKAVELLTKLQFQVDEQILIAAREKEQGDDLLRADKELDAVLHYEKALAHVNNCDESTQMRVQDFTIAILCNSAQSSVNTSAYRKALSLVNNVIEIQPQCASAWKWKARAHEGLRDFNMASSSWKMWGKLSGKHDEAKKQISRFTGWRAFLL 255
The following BLAST results are available for this feature:
BLAST of Gvermi12837.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZY6_9FLOR4.560e-6650.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 55..192
e-value: 4.2E-16
score: 60.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 70..177
NoneNo IPR availableCDDcd02980TRX_Fd_familycoord: 12..36
e-value: 2.4137E-4
score: 36.4512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1759650..1760246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12837.t1Gvermi12837.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1759650..1760246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12837.t1 ID=Gvermi12837.t1|Name=Gvermi12837.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=199bp
MRALTSDVQAFVEPTGCLGECGNGPNVAVETSDRVHVSIEKHIDSVNEAV
RLLRRLKFDVNEEVLRVAVEKEKGDNLMLKGTEGEAGEHYEKAIGILECA
EFSCNKWTEEYKIAILCNWAQSAVKISAYEKALLLVNKIIDVHPDYAAAW
KWKAQAHDGMRQLDMAKQCWGMWGSLSGKTDEAQKQINRLTGWRGWFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf