Gvermi12824.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12824.t1
Unique NameGvermi12824.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length251
Homology
BLAST of Gvermi12824.t1 vs. uniprot
Match: A0A2V3J1V1_9FLOR (LMWPc domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1V1_9FLOR)

HSP 1 Score: 348 bits (892), Expect = 9.800e-119
Identity = 179/250 (71.60%), Postives = 202/250 (80.80%), Query Frame = 0
Query:    1 MQDLAFALALPLKSTPPSYMRNSCKREKFFTSKRRTCACMSEFESNADFTTGDAFREWILARDRGEVAHETSDAHASCAASRVAVLFVGRDNSTVSAAAEAIFTDLCTRRALECFSCHSAGTRVNMEGELPDKGFIEALRFKRGLDISRKMACALDKSDLESYNLIVCMDEQVRSELLFMYTDDEGRYNDAMEEKIVSLSSYCSSPKLRKMQFRSGKYSPDAINLVLAALVDACNGLLVSLIESPPVPPS 250
            M+  AFA  LP++ T    +  S  R      K RT   M  F  N +FTTGDAFREWILARDRGE A E S AH+SCAASRVAVLFVG DNSTVSAAAEAIFTD+C+RRAL+CFSCHS GT V +EGE PD+ FIEALRFKRGLDISRKMACALDKSDLESYNL+VCM E VRS+LL+M  D EG++NDA E+ IV LSSYC +P+LR MQFRSGK+SPDA+NLV+AALVDACNGLLVSLIESPP+PPS
Sbjct:    2 MKAYAFASILPIRPTKAQRVHASHPRLARAPLKGRTRLQMCAFGDNPNFTTGDAFREWILARDRGETAREASHAHSSCAASRVAVLFVGDDNSTVSAAAEAIFTDMCSRRALDCFSCHSVGTGVKLEGEPPDQSFIEALRFKRGLDISRKMACALDKSDLESYNLVVCMTESVRSKLLYMVADKEGKHNDAAEDSIVVLSSYCLNPELRSMQFRSGKHSPDALNLVIAALVDACNGLLVSLIESPPIPPS 251          
BLAST of Gvermi12824.t1 vs. uniprot
Match: A0A7S1XIV5_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XIV5_9RHOD)

HSP 1 Score: 160 bits (406), Expect = 6.720e-45
Identity = 90/198 (45.45%), Postives = 130/198 (65.66%), Query Frame = 0
Query:   48 DFTTGDAFREWILARDRGEVAHETSDAHASCAASRVAVLFVGRDNSTVSAAAEAIFTDLCTRRALE-CFSCHSAGTRVNMEGELPDKGFIEALRFKRGLDISRKMACALDKSDLESYNLIVCMDEQVRSELLFMYTDDEGRYNDAMEEKIVSLSSYCSSPKLRKMQF-RSGKYSPDAINLVLAALVDACNGLLVSLIE 243
            + T GDA R+W+LA +R + + +  +   S    +++VLFV  DN +VS  AEA+F DL  RR LE   SC+SAG  V + G   D  F+EAL F+R LD+S   A   +  D+ SY+LIVCMDE+ RS++++M    +G+++  +EEKI  LSSYC   +LR MQF  + +YS +A+ LV++A+VDAC GLL +LIE
Sbjct:   72 EVTVGDAVRQWMLANERAQSSEQVKEKQRS---PKLSVLFVDVDNRSVSVVAEAVFADLVQRRGLEEKVSCYSAGVDVTV-GAPADARFVEALMFRRKLDVSGHSAIEFEPQDVSSYDLIVCMDERTRSQVIYMTAAPDGKHDVQVEEKIRLLSSYCMDDRLRSMQFPTNSQYSREALKLVMSAVVDACGGLLRALIE 265          
BLAST of Gvermi12824.t1 vs. uniprot
Match: A0A5J4YLQ1_PORPP (LMWPc domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLQ1_PORPP)

HSP 1 Score: 122 bits (306), Expect = 4.020e-29
Identity = 79/202 (39.11%), Postives = 114/202 (56.44%), Query Frame = 0
Query:   50 TTGDAFREW-------ILARDRGEVAHETSDAHASCAASRVAVLFVGRDNSTVSAAAEAIFTDLCTRRALEC-FSCHSAGTRVNMEGELPDKGFIEALRFKRGLDISRKMACALDKSDLESYNLIVCMDEQVRSELLFMYTDDEGRYNDAMEEKIVSLSSYCSSPKLRKMQFRSGKYSPDAINLVLAALVDACNGLLVSLIE 243
            T  +A +EW       +  R +GE   +   A  S       +LFV   N  +S  AEA+FTDLC RR +E  F  +SAGT+  + G  PD  FI AL F+R LDIS  +A   +  DL+SY+L+V   E V+S++L+M   D G ++ A E KI  LSSY S P LR  Q+   +YS +++  ++++LVD    LL +L+E
Sbjct:  177 TVSEALQEWRGADAASVEQRQKGEQREKARGAKES---RERKILFVDEFNLRISVVAEAMFTDLCVRRGIEARFFSYSAGTKATV-GAAPDADFINALWFRRKLDISNHLAVEFEPQDLDSYDLVVVPSEAVKSQILYMLAPD-GMHDTACESKIRVLSSYASGP-LRNKQWPDRQYSRESLKFLMSSLVDVLTQLLFTLLE 372          
BLAST of Gvermi12824.t1 vs. uniprot
Match: A0A6M0FWF9_9CYAN (Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Symploca sp. SIO2E6 TaxID=2607809 RepID=A0A6M0FWF9_9CYAN)

HSP 1 Score: 57.0 bits (136), Expect = 1.460e-6
Identity = 51/163 (31.29%), Postives = 80/163 (49.08%), Query Frame = 0
Query:   85 VLFVGRDNSTVSAAAEAIFTDLCTRRAL-ECFSCHSAGTRVNMEGELPDKGFIEALRFKRGLDISRKMACALDKSDLESYNLIVCMDEQVRSELLFMYTDDEGRYNDAMEEKIVSLSSYCSSPKLRKMQ--FRSGKYSPDAINLVLAALVDACNGLLVSLIES 244
            +LFV   N   S +AE I   L  +  L E   C SAGT     G  PD+    A + K G+ I +  A    +SDLE+++LI+ MD      +LF+  D +G+Y D    K+  +  + S  + R++   +  G    +  N V+  L+DAC GLL  ++ +
Sbjct:    5 LLFVCLGNICRSPSAENIMNHLIEQADLSESIVCDSAGTSSYHIGSAPDRRMSAAAKSK-GI-ILKGQARQFQRSDLETFDLILAMDRDNYQNILFL--DPQGKYQD----KVKLMCDFASHHREREVPDPYYGGT---EGFNQVIDLLLDACEGLLQKVVRT 156          
BLAST of Gvermi12824.t1 vs. uniprot
Match: A0A2S5G7B9_9BACL (Low molecular weight phosphotyrosine protein phosphatase n=2 Tax=Jeotgalibacillus proteolyticus TaxID=2082395 RepID=A0A2S5G7B9_9BACL)

HSP 1 Score: 56.6 bits (135), Expect = 1.910e-6
Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 0
Query:   85 VLFVGRDNSTVSAAAEAIFTDLCTRRAL-ECFSCHSAGTRVNMEGELPDKGFIEALRFKRGLDISRKMACALDKSDLESYNLIVCMDEQVRSELLFMYTDDEGR 187
            VLF G +N++ S  AEA+F DL  ++ L E  S  SAG    M+G+ PD   +E LR + G+         L + DLE+++ I+CMD+Q   E+  +     G+
Sbjct:    8 VLFAGMENTSCSLMAEAVFNDLIRQQELGEKISSESAGINQWMQGKEPDPLVLELLR-ENGVSAEGLNPKQLVREDLETFDYILCMDQQTGQEVQKLLRASAGK 110          
BLAST of Gvermi12824.t1 vs. uniprot
Match: A0A352ANR8_9CYAN (Protein tyrosine phosphatase n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352ANR8_9CYAN)

HSP 1 Score: 54.7 bits (130), Expect = 9.980e-6
Identity = 49/157 (31.21%), Postives = 78/157 (49.68%), Query Frame = 0
Query:   85 VLFVGRDNSTVSAAAEAIFTDLCTRRAL-ECFSCHSAGTRVNMEGELPDKGFIEALRFKRGLDISRKMACALDKSDLESYNLIVCMDEQVRSELLFMYTDDEGRYNDAMEEKIVSLSSYCSSPKLRKMQ--FRSGKYSPDAINLVLAALVDACNGLL 238
            +LFV   N   S +AE I   L  +  L +   C SAGT     G  PD+  + A   +RG+ + +  A   +KSD E+++LI+ MD +   ++L +  D  G+Y D    K+  +  + S    R++   +  G   P+  N V+  L+DAC GLL
Sbjct:    5 LLFVCLGNICRSPSAENIMNHLIEQAGLGDRIICDSAGTSSYHIGAAPDRR-MSAAASRRGIKL-KGQARQFEKSDFETFDLILAMDRENYRDILSL--DPTGKYRD----KVRLMCEFASHHSEREVPDPYYGG---PEGFNKVIDLLLDACEGLL 150          
The following BLAST results are available for this feature:
BLAST of Gvermi12824.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J1V1_9FLOR9.800e-11971.60LMWPc domain-containing protein n=1 Tax=Gracilario... [more]
A0A7S1XIV5_9RHOD6.720e-4545.45Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4YLQ1_PORPP4.020e-2939.11LMWPc domain-containing protein n=1 Tax=Porphyridi... [more]
A0A6M0FWF9_9CYAN1.460e-631.29Low molecular weight phosphotyrosine protein phosp... [more]
A0A2S5G7B9_9BACL1.910e-635.58Low molecular weight phosphotyrosine protein phosp... [more]
A0A352ANR8_9CYAN9.980e-631.21Protein tyrosine phosphatase n=1 Tax=Cyanobacteria... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023485Phosphotyrosine protein phosphatase ISMARTSM00226LMWPc_2coord: 83..240
e-value: 0.0079
score: -17.8
IPR023485Phosphotyrosine protein phosphatase IPFAMPF01451LMWPccoord: 85..183
e-value: 2.5E-11
score: 44.1
NoneNo IPR availableGENE3D3.40.50.2300coord: 67..243
e-value: 1.3E-20
score: 76.0
NoneNo IPR availablePANTHERPTHR47439LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATEDcoord: 32..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR036196Phosphotyrosine protein phosphatase I superfamilySUPERFAMILY52788Phosphotyrosine protein phosphatases Icoord: 84..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1706720..1707472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12824.t1Gvermi12824.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1706720..1707472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12824.t1 ID=Gvermi12824.t1|Name=Gvermi12824.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=251bp
MQDLAFALALPLKSTPPSYMRNSCKREKFFTSKRRTCACMSEFESNADFT
TGDAFREWILARDRGEVAHETSDAHASCAASRVAVLFVGRDNSTVSAAAE
AIFTDLCTRRALECFSCHSAGTRVNMEGELPDKGFIEALRFKRGLDISRK
MACALDKSDLESYNLIVCMDEQVRSELLFMYTDDEGRYNDAMEEKIVSLS
SYCSSPKLRKMQFRSGKYSPDAINLVLAALVDACNGLLVSLIESPPVPPS
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023485Ptyr_pPase
IPR036196Ptyr_pPase_sf