Gvermi12820.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12820.t1
Unique NameGvermi12820.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length89
Homology
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BLAST of Gvermi12820.t1 vs. uniprot
Match: A0A2V3J4K2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4K2_9FLOR)

HSP 1 Score: 87.4 bits (215), Expect = 9.720e-21
Identity = 44/75 (58.67%), Postives = 59/75 (78.67%), Query Frame = 0 
Query:    3 DTFSLDDQHLLSQLLGSTGDPRSSPSAELQHEKDQRRLLLILLSVFLVAVLSMVFAWIRYGKEVIEALTAAESNQ 77
            D  S++DQ LL +LLG+ G+P SSPS+E+Q EKDQ R L++LLS+FLV++L +V AW+ YGK+V EAL AAE  Q
Sbjct:    4 DALSMNDQRLLIELLGNGGEPGSSPSSEIQFEKDQARSLVLLLSLFLVSLLGVVLAWMHYGKDVTEALLAAEPGQ 78
The following BLAST results are available for this feature:
BLAST of Gvermi12820.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4K2_9FLOR9.720e-2158.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..39
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1686012..1686375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12820.t1Gvermi12820.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1686012..1686375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12820.t1 ID=Gvermi12820.t1|Name=Gvermi12820.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=89bp
MVDTFSLDDQHLLSQLLGSTGDPRSSPSAELQHEKDQRRLLLILLSVFLV
AVLSMVFAWIRYGKEVIEALTAAESNQRQSRSYRHKRE*
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