Gvermi12813.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12813.t1
Unique NameGvermi12813.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length210
Homology
BLAST of Gvermi12813.t1 vs. uniprot
Match: A0A2V3J2C7_9FLOR (Transcriptional activator Myb n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2C7_9FLOR)

HSP 1 Score: 232 bits (592), Expect = 3.050e-72
Identity = 130/196 (66.33%), Postives = 147/196 (75.00%), Query Frame = 0
Query:    1 MSPSPTNRRISVQDLLNSNTAPSQPSSQSSSVTDLEPDLPGSPSPNTSP--ALSAHPRLPATARGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQARERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNSVKNRFNSTLKRAIKECAAFNSGPF-SIDRIIGTVHAAPHPLPQP 193
            M  SP  R ISVQDLLNS + PS PSSQ +S+TD + D   +P P + P  A S   R   T RGPWRR+EDQLLL LV +YGP+HWSAIAR IPRR+GKQARERW+NQLNP LKKKNW IREDR IL+AH RLGNRWSAIA +LPGRTDNSVKNR+NSTLKRAIK+C+  NSG   S   I+ TVHA P  L  P
Sbjct:    1 MVASPQRRCISVQDLLNS-SVPSNPSSQHTSLTDFDTDRTPTPPPQSPPSTAPSLELRKSITTRGPWRREEDQLLLTLVHRYGPKHWSAIARHIPRRSGKQARERWMNQLNPALKKKNWTIREDRTILDAHSRLGNRWSAIAQLLPGRTDNSVKNRYNSTLKRAIKDCS--NSGMLLSTHNILNTVHATPTALSAP 193          
BLAST of Gvermi12813.t1 vs. uniprot
Match: Q7XZ94_GRIJA (Transforming protein myb (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ94_GRIJA)

HSP 1 Score: 145 bits (367), Expect = 1.390e-40
Identity = 68/115 (59.13%), Postives = 87/115 (75.65%), Query Frame = 0
Query:   62 RGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQARERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNSVKNRFNSTLKRAIKECAAFNSGPFSI 176
            +GPWR +ED +L  LV+K GPR W+ IA  IP RTGKQARERW+NQL+P L K+ W   EDR++++AH RLGNRWS IA +L GRTDN+ KNRFN+T++R I E AA N+   S+
Sbjct:    9 KGPWRPEEDAILTQLVAKLGPRRWTVIASHIPGRTGKQARERWLNQLSPDLAKRPWTPEEDRVVMQAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQISELAAGNARADSV 123          
BLAST of Gvermi12813.t1 vs. uniprot
Match: A0A5J4Z7G3_PORPP (Myb-related protein A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G3_PORPP)

HSP 1 Score: 141 bits (356), Expect = 1.140e-38
Identity = 67/104 (64.42%), Postives = 82/104 (78.85%), Query Frame = 0
Query:   62 RGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQARERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNSVKNRFNSTLKRAIKE 165
            +GPWR +ED+LL  LV+K GPR WS +A +IP RTGKQ+RERW+NQL+P+L K  W   ED II++AH RLGNRWS IA +L GRTDNSVKNRFNST+K+   E
Sbjct:  103 KGPWRPEEDELLRSLVAKMGPRRWSLVAAQIPGRTGKQSRERWLNQLSPSLAKAPWTEEEDMIIMDAHSRLGNRWSEIAKLLNGRTDNSVKNRFNSTIKKLYDE 206          
BLAST of Gvermi12813.t1 vs. uniprot
Match: A0A7S0BN60_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BN60_9RHOD)

HSP 1 Score: 139 bits (349), Expect = 2.400e-38
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 0
Query:   55 PRLPATARGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQARERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNSVKNRFNSTLKR 161
            P L    +GPW   ED+LL+ LV KYG R W+ IA  I  RTGKQARERW+NQLNP L K  W+  EDR+I EAH +LGNRW+ IA +LPGRTDN+VKNRFN++L+R
Sbjct:   16 PELSPRVKGPWSPSEDRLLVELVQKYGARRWTEIATHIHGRTGKQARERWLNQLNPQLTKTTWSESEDRVITEAHAKLGNRWAEIAKLLPGRTDNAVKNRFNTSLRR 122          
BLAST of Gvermi12813.t1 vs. uniprot
Match: A0A8B9FT60_9PSIT (MYB proto-oncogene like 1 n=1 Tax=Amazona collaria TaxID=241587 RepID=A0A8B9FT60_9PSIT)

HSP 1 Score: 140 bits (352), Expect = 4.440e-38
Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   58 PATARGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQARERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNSVKNRFNSTLKRAIKE 165
            P   +GPW ++EDQ ++ LV KYGP+ WS IA+ +  R GKQ RERW N LNP +KK +W   EDRII EAH+RLGNRW+ IA +LPGRTDNS+KN +NST++R +++
Sbjct:   80 PELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 187          
BLAST of Gvermi12813.t1 vs. uniprot
Match: A0A663MSR3_ATHCN (MYB proto-oncogene like 1 n=2 Tax=Strigidae TaxID=30459 RepID=A0A663MSR3_ATHCN)

HSP 1 Score: 140 bits (352), Expect = 5.690e-38
Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   58 PATARGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQARERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNSVKNRFNSTLKRAIKE 165
            P   +GPW ++EDQ ++ LV KYGP+ WS IA+ +  R GKQ RERW N LNP +KK +W   EDRII EAH+RLGNRW+ IA +LPGRTDNS+KN +NST++R +++
Sbjct:   81 PELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 188          
BLAST of Gvermi12813.t1 vs. uniprot
Match: A0A8D2J4H8_VARKO (MYB proto-oncogene like 1 n=1 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2J4H8_VARKO)

HSP 1 Score: 140 bits (352), Expect = 5.690e-38
Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   58 PATARGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQARERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNSVKNRFNSTLKRAIKE 165
            P   +GPW ++EDQ ++ LV KYGP+ WS IA+ +  R GKQ RERW N LNP +KK +W   EDRII EAH+RLGNRW+ IA +LPGRTDNS+KN +NST++R +++
Sbjct:   83 PELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 190          
BLAST of Gvermi12813.t1 vs. uniprot
Match: A0A8B9TI56_ANAPL (MYB proto-oncogene like 1 n=1 Tax=Anas platyrhynchos TaxID=8839 RepID=A0A8B9TI56_ANAPL)

HSP 1 Score: 140 bits (352), Expect = 5.850e-38
Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   58 PATARGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQARERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNSVKNRFNSTLKRAIKE 165
            P   +GPW ++EDQ ++ LV KYGP+ WS IA+ +  R GKQ RERW N LNP +KK +W   EDRII EAH+RLGNRW+ IA +LPGRTDNS+KN +NST++R +++
Sbjct:   83 PELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 190          
BLAST of Gvermi12813.t1 vs. uniprot
Match: A0A8D0FZ66_SPHPU (MYB proto-oncogene like 1 n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0FZ66_SPHPU)

HSP 1 Score: 140 bits (352), Expect = 6.530e-38
Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   58 PATARGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQARERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNSVKNRFNSTLKRAIKE 165
            P   +GPW ++EDQ ++ LV KYGP+ WS IA+ +  R GKQ RERW N LNP +KK +W   EDRII EAH+RLGNRW+ IA +LPGRTDNS+KN +NST++R +++
Sbjct:   82 PELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 189          
BLAST of Gvermi12813.t1 vs. uniprot
Match: A0A1L1RYE3_CHICK (Myb-related protein A n=2 Tax=Gallus gallus TaxID=9031 RepID=A0A1L1RYE3_CHICK)

HSP 1 Score: 139 bits (351), Expect = 6.630e-38
Identity = 61/108 (56.48%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   58 PATARGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQARERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNSVKNRFNSTLKRAIKE 165
            P   +GPW ++EDQ ++ LV KYGP+ WS IA+ +  R GKQ RERW N LNP +KK +W   EDR+I EAH+RLGNRW+ IA +LPGRTDNS+KN +NST++R +++
Sbjct:   83 PELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 190          
The following BLAST results are available for this feature:
BLAST of Gvermi12813.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2C7_9FLOR3.050e-7266.33Transcriptional activator Myb n=1 Tax=Gracilariops... [more]
Q7XZ94_GRIJA1.390e-4059.13Transforming protein myb (Fragment) n=1 Tax=Griffi... [more]
A0A5J4Z7G3_PORPP1.140e-3864.42Myb-related protein A n=1 Tax=Porphyridium purpure... [more]
A0A7S0BN60_9RHOD2.400e-3861.68Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A8B9FT60_9PSIT4.440e-3857.41MYB proto-oncogene like 1 n=1 Tax=Amazona collaria... [more]
A0A663MSR3_ATHCN5.690e-3857.41MYB proto-oncogene like 1 n=2 Tax=Strigidae TaxID=... [more]
A0A8D2J4H8_VARKO5.690e-3857.41MYB proto-oncogene like 1 n=1 Tax=Varanus komodoen... [more]
A0A8B9TI56_ANAPL5.850e-3857.41MYB proto-oncogene like 1 n=1 Tax=Anas platyrhynch... [more]
A0A8D0FZ66_SPHPU6.530e-3857.41MYB proto-oncogene like 1 n=1 Tax=Sphenodon puncta... [more]
A0A1L1RYE3_CHICK6.630e-3856.48Myb-related protein A n=2 Tax=Gallus gallus TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 113..161
e-value: 7.7E-15
score: 65.3
coord: 61..110
e-value: 2.1E-13
score: 60.5
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 57..108
score: 11.613808
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 109..159
score: 10.313219
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 116..159
e-value: 6.24695E-12
score: 56.4298
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 64..106
e-value: 4.14472E-14
score: 62.2078
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 114..157
e-value: 3.4E-14
score: 52.8
coord: 62..107
e-value: 2.9E-13
score: 49.8
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 57..112
score: 25.253325
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 113..163
score: 19.608677
NoneNo IPR availableGENE3D1.10.10.60coord: 62..113
e-value: 7.1E-21
score: 75.9
NoneNo IPR availableGENE3D1.10.10.60coord: 116..171
e-value: 1.9E-18
score: 68.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 58..168
NoneNo IPR availablePANTHERPTHR45614:SF5TRANSCRIPTIONAL ACTIVATOR MYBcoord: 58..168
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 61..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1615209..1616118 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12813.t1Gvermi12813.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1615209..1616118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12813.t1 ID=Gvermi12813.t1|Name=Gvermi12813.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=210bp
MSPSPTNRRISVQDLLNSNTAPSQPSSQSSSVTDLEPDLPGSPSPNTSPA
LSAHPRLPATARGPWRRDEDQLLLHLVSKYGPRHWSAIARKIPRRTGKQA
RERWINQLNPTLKKKNWNIREDRIILEAHRRLGNRWSAIAHMLPGRTDNS
VKNRFNSTLKRAIKECAAFNSGPFSIDRIIGTVHAAPHPLPQPLRTASTA
HAVTICLST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf