Gvermi12811.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12811.t1
Unique NameGvermi12811.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length222
Homology
BLAST of Gvermi12811.t1 vs. uniprot
Match: A0A2V3J1J6_9FLOR (Glutathione peroxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1J6_9FLOR)

HSP 1 Score: 271 bits (692), Expect = 2.440e-89
Identity = 137/191 (71.73%), Postives = 156/191 (81.68%), Query Frame = 0
Query:   35 RSALFGGALLSATLFATTPLAAAHADDG----PSPTMTLSDLPPMKDIDGNPVSPQRFDGKVVFVMNVASACGYTQAGYTLFKKLTDKYSPDQFLAVAIPCNSFGFQESGSSDQIKTFALQRADKLLIMERSNVNGSNQHPIIELAKSKFPAQISWNFDGRYVFDKSGEPVARFGNSATDQQIEAAIDKAL 221
            R+   G ALL+A + AT PL     +      PS TMTLSDL  +KDIDGNPVSP  F GKVVF MNVASACGYTQ+GY LFKKLTDKYSP+ F+AVAIPCNSFGFQESGSS+QIK+FAL RADKLLIMERS+VNG+ QHPI++LAKSKFP +ISWNFDGRYVFD+ G P+ARFGNSA+D +IEA ID AL
Sbjct:   26 RTTFVGRALLAAAVIAT-PLTIVRGESSQAPTPSTTMTLSDLATLKDIDGNPVSPDAFAGKVVFAMNVASACGYTQSGYALFKKLTDKYSPNDFVAVAIPCNSFGFQESGSSEQIKSFALARADKLLIMERSDVNGAKQHPIVQLAKSKFPGKISWNFDGRYVFDRKGHPIARFGNSASDAEIEATIDSAL 215          
BLAST of Gvermi12811.t1 vs. uniprot
Match: Q7XZ49_GRIJA (Glutathione peroxidase (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ49_GRIJA)

HSP 1 Score: 209 bits (532), Expect = 7.250e-66
Identity = 98/152 (64.47%), Postives = 123/152 (80.92%), Query Frame = 0
Query:   69 LSDLPPMKDIDGNPVSPQRFDGKVVFVMNVASACGYTQAGYTLFKKLTDKYSPDQFLAVAIPCNSFGFQESGSSDQIKTFALQRADKLLIMERSNVNGSNQHPIIELAKSKFPAQISWNFDGRYVFDKSGEPVARFGNSATDQQIEAAIDKA 220
            LSDL  +KDI+G  + P RF GKVVF MNVASACGYT+ GY L K+LTDK++P  F+AVAIPCNSF +QESGS++ +KTFAL RADKLL+ E++ VNG++ HPI+ LAK  FP ++ WNFDGR+VFD++G PVARFGNSA  ++IEAAI  A
Sbjct:    6 LSDLQGLKDIEGGAIDPSRFAGKVVFAMNVASACGYTKPGYELLKRLTDKFAPADFVAVAIPCNSFLWQESGSAEDVKTFALARADKLLVTEKAAVNGNHPHPIVALAKQAFPGRVMWNFDGRFVFDRNGVPVARFGNSAKPEEIEAAIANA 157          
BLAST of Gvermi12811.t1 vs. uniprot
Match: A0A5J4YJB8_PORPP (Glutathione peroxidase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJB8_PORPP)

HSP 1 Score: 143 bits (360), Expect = 4.490e-39
Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 0
Query:   68 TLSDLPPMKDIDGNPVSPQRFDGKVVFVMNVASACGYTQAGYTLFKKLTDKYSPDQFLAVAIPCNSFGFQESGSSDQIKTFALQRADK--LLIMERSNVNGSNQHPIIELAKSKFPAQISWNFDGRYVFDKSGEPVARFGNSATDQQIEAAIDKAL 221
            +L+D+  M D+DGNPV     +GKVV  MNVA ACGYT++GY++   +  K   D+   V  P N FG QE GS ++IK+F   + +   LL+ME+S+V GS  +P+ +LAK     +  WNFDG++VFDK+G+PV R  NSAT+  I AA+ K L
Sbjct:   62 SLADVKGMSDLDGNPVDFASLNGKVVLAMNVACACGYTKSGYSMVSSIASKLG-DKVRVVCFPSNDFGAQEPGSPEEIKSFVSSKFNSPDLLLMEKSHVKGSQANPVFKLAKEAGLGEPKWNFDGKFVFDKTGKPVVRLDNSATESDILAAVQKYL 216          
BLAST of Gvermi12811.t1 vs. uniprot
Match: I1VWQ4_9CHLO (Glutathione peroxidase n=1 Tax=Chlorella sp. NJ-18 TaxID=371065 RepID=I1VWQ4_9CHLO)

HSP 1 Score: 113 bits (283), Expect = 5.720e-28
Identity = 59/151 (39.07%), Postives = 93/151 (61.59%), Query Frame = 0
Query:   75 MKDIDGNPVSPQRFDGKVVFVMNVASACGYTQAGYTLFKKLTDKYSPDQFLAVAIPCNSFGFQESGSSDQIKTFALQRADKLLIMERSNVNGSNQHPIIELAKSK----FPAQISWNFDGRYVFDKSGEPVARFGNSATDQQIEAAIDKAL 221
            +K IDG  +   +F GKV+ V+NVASACG+T   YT   +L +KYS D    +A PCN FG QE GS+ +IK+FA ++  K  +  +++VNG N  P+ +  K +      + I WNF  +++ D++G  V R+G++ T +QIE+ + K +
Sbjct:   33 VKSIDGKDIKMDKFKGKVLLVINVASACGFTPQ-YTEMSELYNKYSKDGLEVLAFPCNQFGAQEPGSNSEIKSFAERKGFKGPMFAKTDVNGPNALPLFDFLKGQQGGLLTSDIKWNFT-KFLVDRNGNVVKRYGSTTTPRQIESDVKKLI 181          
BLAST of Gvermi12811.t1 vs. uniprot
Match: A0A813S3P8_9BILA (Glutathione peroxidase n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813S3P8_9BILA)

HSP 1 Score: 112 bits (281), Expect = 1.050e-27
Identity = 59/146 (40.41%), Postives = 84/146 (57.53%), Query Frame = 0
Query:   76 KDIDGNPVSPQRFDGKVVFVMNVASACGYTQAGYTLFKKLTDKYSPDQFLAVAIPCNSFGFQESGSSDQIKTFALQRADKLLIMERSNVNGSNQHPIIELAKSKFPAQISWNFDGRYVFDKSGEPVARFGNS--ATDQQIEAAIDK 219
            KDIDG   S   + GKV+ V+NVASACG T   Y     L DK+    F  +A PCN F +QESG+  +IKTF  +   +  + ++ NVNG+  HPI    K  FP +++WNF G+++ D +G P AR  ++    D  I+  ID+
Sbjct:   25 KDIDGVEKSMADYKGKVLMVINVASACGKTDREYKYLTGLYDKFHSQGFEILAFPCNQFMYQESGTCTKIKTFIQKYNVQFPMFDKINVNGNETHPIYTWLKQSFPGRVTWNFSGKFLIDHNGIPRARSNDNFEEIDHLIQKLIDE 170          
BLAST of Gvermi12811.t1 vs. uniprot
Match: A0A7S2Z3S7_9CHLO (Glutathione peroxidase n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z3S7_9CHLO)

HSP 1 Score: 110 bits (275), Expect = 6.630e-27
Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 0
Query:   75 MKDIDGNPVSPQRFDGKVVFVMNVASACGYTQAGYTLFKKLTDKYSPDQFLAVAIPCNSFGFQESGSSDQIKTFALQRADKLLIMERSNVNGSNQHPIIELAKSKFPAQI-----SWNFDGRYVFDKSGEPVARFGNSATDQQIEAAIDKAL 221
            +KDID   +SP  + GKV+ V+NVAS CG+T + Y    +L DKY    F  +A PCN FG QE GSS+QIK F  +   +  + E+  VNG + HP     K K P         WNF+ +++ DK G  V R+ ++     I   ID+ L
Sbjct:   20 LKDIDNRMISPDEYIGKVLLVVNVASQCGFTVSNYKDLVQLYDKYKGKDFEILAFPCNQFGGQEPGSSEQIKQFTKRYGVEFTVTEKVMVNGPDTHPFFRYLKEKGPKSFLGNDTKWNFE-KFLVDKDGNVVKRYLSTTAPMDIAKDIDRIL 170          
BLAST of Gvermi12811.t1 vs. uniprot
Match: GPX1_ARATH (Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic n=10 Tax=Brassicaceae TaxID=3700 RepID=GPX1_ARATH)

HSP 1 Score: 110 bits (274), Expect = 4.910e-26
Identity = 62/152 (40.79%), Postives = 87/152 (57.24%), Query Frame = 0
Query:   75 MKDIDGNPVSPQRFDGKVVFVMNVASACGYTQAGYTLFKKLTDKYSPDQFLAVAIPCNSFGFQESGSSDQIKTFALQRAD-KLLIMERSNVNGSNQHPIIELAKSK----FPAQISWNFDGRYVFDKSGEPVARFGNSATDQQIEAAIDKAL 221
            +KDIDG  V+  +F GKV+ ++NVAS CG T + Y+    L +KY    F  +A PCN FGFQE GS+ +IK FA  R   +  I ++ +VNG +  PI E  KS         I WNF+ +++ DK G+ V R+  + +  QIE  I K L
Sbjct:   84 VKDIDGKDVALNKFKGKVMLIVNVASRCGLTSSNYSELSHLYEKYKTQGFEILAFPCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYEFLKSNAGGFLGGLIKWNFE-KFLIDKKGKVVERYPPTTSPFQIEKDIQKLL 234          
BLAST of Gvermi12811.t1 vs. uniprot
Match: A0A4S3LY67_9FLAO (Glutathione peroxidase n=1 Tax=Robertkochia marina TaxID=1227945 RepID=A0A4S3LY67_9FLAO)

HSP 1 Score: 107 bits (268), Expect = 5.590e-26
Identity = 57/152 (37.50%), Postives = 87/152 (57.24%), Query Frame = 0
Query:   76 KDIDGNPVSPQRFDGKVVFVMNVASACGYTQAGYTLFKKLTDKYSPDQFLAVAIPCNSFGFQESGSSDQIKTFA-LQRADKLLIMERSNVNGSNQHPIIELAKSK-----FPAQISWNFDGRYVFDKSGEPVARFGNSATDQQIEAAIDKAL 221
            K I G P++ ++F GK V V+N AS CG+T   Y   +KL  KY  +  + +  PCN FG QESGSS++IK F  L       + ++  VNG N HP+ +  KS      F ++I WNF  +++ DK G+P+ RF  +   +++EA I + +
Sbjct:    9 KTISGEPLNMEQFKGKTVIVVNTASKCGFTPQ-YAGLEKLYQKYKDEGLVVLGFPCNQFGKQESGSSEEIKEFCELNYGVSFPMFDKVRVNGVNAHPLFKYLKSHLSGGLFGSRIKWNFT-KFIIDKKGKPIKRFSPTTKPEKMEAYIQRVM 158          
BLAST of Gvermi12811.t1 vs. uniprot
Match: UPI001E278AF9 (probable phospholipid hydroperoxide glutathione peroxidase n=2 Tax=Coccinellini TaxID=263631 RepID=UPI001E278AF9)

HSP 1 Score: 107 bits (268), Expect = 7.130e-26
Identity = 56/150 (37.33%), Postives = 90/150 (60.00%), Query Frame = 0
Query:   75 MKDIDGNPVSPQRFDGKVVFVMNVASACGYTQAGYTLFKKLTDKYSPDQFLAV-AIPCNSFGFQESGSSDQIKTFALQRADKLLIMERSNVNGSNQHPIIELAKSKFPA----QISWNFDGRYVFDKSGEPVARFGNSATDQQIEAAIDK 219
            + DI+G PVS +++ G V+ ++NVAS CGYT   YT   +L D+Y+  + L + A PCN FG QE G +++I  F  +R  K  + E+ NVNG++ HP+ +  K K        I WNF  +++ DK+G+PV R G + + + +   ++K
Sbjct:   19 VNDINGQPVSLEKYKGHVLIIVNVASKCGYTNNHYTELNELYDEYAETKGLKILAFPCNQFGGQEPGDANEICEFTKKRNVKFDLFEKVNVNGNDAHPLFKYLKQKQGGFLLDAIKWNFT-KFIIDKNGQPVDRQGPNVSPKSLIKTLEK 167          
BLAST of Gvermi12811.t1 vs. uniprot
Match: A0A5J6CSM9_9CHLO (Glutathione peroxidase (Fragment) n=1 Tax=Ettlia sp. YC001 TaxID=1191503 RepID=A0A5J6CSM9_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 1.080e-25
Identity = 59/152 (38.82%), Postives = 88/152 (57.89%), Query Frame = 0
Query:   75 MKDIDGNPVSPQRFDGKVVFVMNVASACGYTQAGYTLFKKLTDKYSPDQFLAVAIPCNSFGFQESGSSDQIKTFALQRADKLL-IMERSNVNGSNQHPIIELAKSK----FPAQISWNFDGRYVFDKSGEPVARFGNSATDQQIEAAIDKAL 221
            +KDIDG   +  ++ GKVV V+N+ASACG+T   Y+  ++L +KY     + +  PCN FG QE GS+  IKTFA +       +M + +VNGSN  P+ +  K +      + I WNF  +++ DK G  V R+G++ T  Q+E  I K L
Sbjct:   49 VKDIDGRNTNLSQYKGKVVLVVNLASACGFTPQ-YSELQELYNKYQKQGLVVLGFPCNQFGAQEPGSNSDIKTFAKKNYGVTFPLMSKVDVNGSNAEPVFDWLKKQKGGFLTSDIKWNFS-KFLVDKDGSVVGRYGSTTTPTQLETDIKKLL 198          
The following BLAST results are available for this feature:
BLAST of Gvermi12811.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1J6_9FLOR2.440e-8971.73Glutathione peroxidase n=1 Tax=Gracilariopsis chor... [more]
Q7XZ49_GRIJA7.250e-6664.47Glutathione peroxidase (Fragment) n=1 Tax=Griffith... [more]
A0A5J4YJB8_PORPP4.490e-3946.15Glutathione peroxidase n=1 Tax=Porphyridium purpur... [more]
I1VWQ4_9CHLO5.720e-2839.07Glutathione peroxidase n=1 Tax=Chlorella sp. NJ-18... [more]
A0A813S3P8_9BILA1.050e-2740.41Glutathione peroxidase n=1 Tax=Didymodactylos carn... [more]
A0A7S2Z3S7_9CHLO6.630e-2738.82Glutathione peroxidase n=1 Tax=Chloropicon laureae... [more]
GPX1_ARATH4.910e-2640.79Phospholipid hydroperoxide glutathione peroxidase ... [more]
A0A4S3LY67_9FLAO5.590e-2637.50Glutathione peroxidase n=1 Tax=Robertkochia marina... [more]
UPI001E278AF97.130e-2637.33probable phospholipid hydroperoxide glutathione pe... [more]
A0A5J6CSM9_9CHLO1.080e-2538.82Glutathione peroxidase (Fragment) n=1 Tax=Ettlia s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000889Glutathione peroxidasePRINTSPR01011GLUTPROXDASEcoord: 124..140
score: 47.71
coord: 88..105
score: 53.44
coord: 184..193
score: 46.35
IPR000889Glutathione peroxidasePFAMPF00255GSHPxcoord: 75..174
e-value: 2.7E-22
score: 78.4
IPR000889Glutathione peroxidasePANTHERPTHR11592GLUTATHIONE PEROXIDASEcoord: 75..220
IPR000889Glutathione peroxidasePROSITEPS51355GLUTATHIONE_PEROXID_3coord: 60..221
score: 36.970825
IPR000889Glutathione peroxidaseCDDcd00340GSH_Peroxidasecoord: 76..217
e-value: 3.98274E-49
score: 155.751
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 64..221
e-value: 4.8E-40
score: 138.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..221
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
IPR029759Glutathione peroxidase active sitePROSITEPS00460GLUTATHIONE_PEROXID_1coord: 90..105
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 46..221
score: 9.027113
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 75..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1613000..1613665 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12811.t1Gvermi12811.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1613000..1613665 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12811.t1 ID=Gvermi12811.t1|Name=Gvermi12811.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=222bp
MLSFVPSALALARRVLPAAAPRVAAAPRVAAARPRSALFGGALLSATLFA
TTPLAAAHADDGPSPTMTLSDLPPMKDIDGNPVSPQRFDGKVVFVMNVAS
ACGYTQAGYTLFKKLTDKYSPDQFLAVAIPCNSFGFQESGSSDQIKTFAL
QRADKLLIMERSNVNGSNQHPIIELAKSKFPAQISWNFDGRYVFDKSGEP
VARFGNSATDQQIEAAIDKAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000889Glutathione_peroxidase
IPR029759GPX_AS
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf