Gvermi12805.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12805.t1
Unique NameGvermi12805.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length291
Homology
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A2V3II36_9FLOR (Diaminopimelate epimerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II36_9FLOR)

HSP 1 Score: 456 bits (1173), Expect = 9.280e-160
Identity = 215/259 (83.01%), Postives = 237/259 (91.51%), Query Frame = 0
Query:    1 MTAFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPG 259
            MTAFRKYHGLGNDFVLIDNRH ++PVL+P EAE VCNRNTGVGADGVIFLLPP+ P+SDFGMRLYNSDGTEPEMCGNGIRCLARFAADLG+ G+   KYVVDTGAGEI+PEME GSE+V+VDMG PILEP+ VPTKL T+ +N YQDVL+ VAG+DWTF CVSMGNPHA+TFVTK+ YDDMDSRLEA GP FENH VFPQRTNTEFV++ +KTEFDMLVWERGAGRTMACGTGACAVLVAAV+TGRA+KDVP IIHLPG
Sbjct:   60 MTAFRKYHGLGNDFVLIDNRHDAAPVLTPVEAEKVCNRNTGVGADGVIFLLPPSNPSSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGLHGKTPGKYVVDTGAGEIVPEMEPGSEEVRVDMGTPILEPQNVPTKLNTTEANGYQDVLKGVAGRDWTFVCVSMGNPHAITFVTKKEYDDMDSRLEAVGPDFENHSVFPQRTNTEFVFERSKTEFDMLVWERGAGRTMACGTGACAVLVAAVLTGRADKDVPVIIHLPG 318          
BLAST of Gvermi12805.t1 vs. uniprot
Match: R7QGK7_CHOCR (Diaminopimelate epimerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGK7_CHOCR)

HSP 1 Score: 422 bits (1085), Expect = 3.360e-146
Identity = 199/285 (69.82%), Postives = 241/285 (84.56%), Query Frame = 0
Query:    1 MTAFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEG 285
            MTAFRKYHG+GNDFV++DNR   +P+ +P ++ A+C+RNTGVGADGVIFLLPP + +SDF MRLYNSDGTEPEMCGNGIRCLA+FA DL +      ++V+DTGAG IIPE+E GS +VKVDMG P++ P +VPT L TS S  Y+ VL +V G DWTFSCVSMGNPHA++FV+KEV+ +MD++LE  GPSFE +PVFPQ+TNTE+ +Q  +TEFDMLVWERGAGRTMACGTGACAVLVAAV+TGRA+KD P +IHLPGGDLTIEW S +NH+ MTGPA+LVFEG
Sbjct:   43 MTAFRKYHGIGNDFVVVDNRAQKNPLYTPDQSVAICDRNTGVGADGVIFLLPPKRRSSDFAMRLYNSDGTEPEMCGNGIRCLAKFADDLKIPTASPGRFVIDTGAGVIIPEIEQGSSEVKVDMGEPVIIPGEVPTTLDTSESAGYEAVL-NVDGTDWTFSCVSMGNPHAISFVSKEVFLEMDTKLEEVGPSFECNPVFPQKTNTEWAFQRCRTEFDMLVWERGAGRTMACGTGACAVLVAAVLTGRADKDQPTVIHLPGGDLTIEWVSKTNHIMMTGPAELVFEG 326          
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A7S2S1Q0_9STRA (Diaminopimelate epimerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q0_9STRA)

HSP 1 Score: 305 bits (780), Expect = 6.400e-100
Identity = 156/288 (54.17%), Postives = 196/288 (68.06%), Query Frame = 0
Query:    3 AFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAH--GPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKLA 288
            AF+KYHGLGNDF+L+DNRH++ PV+SP +A  +C+RN GVG DGVIF LP    ++D+ MR+YNSDG+EPEMCGNGIRC+ARF   L         Y ++TGAG IIP +  G   V VDMG PILE  +VPT L  +  +   +    VA QDW  +CVSMGNPHAV F+     D++DS L+ H  GP FE+HP FP R NTEFV   + T   M VWERGAG T+ACGTGACA+ VAA++ G+  +    ++ LPGGDL IEW   +N  +MTGPA+LVF G  A
Sbjct:   51 AFQKYHGLGNDFILVDNRHSTDPVMSPEQAARMCDRNFGVGGDGVIFALP--SESADYAMRIYNSDGSEPEMCGNGIRCMARFLQKLDGSEGTETTYTINTGAGPIIPVIR-GDGLVTVDMGPPILEGPKVPTTLAPTQGDVVINAPLRVADQDWEVTCVSMGNPHAVVFI-----DNVDS-LDLHHVGPQFESHPEFPARINTEFVEVKSPTHLKMKVWERGAGPTLACGTGACALTVAAILAGKTSERT-CVVTLPGGDLEIEWREENNRCYMTGPAELVFSGDYA 328          
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A7S3AC78_9RHOD (Diaminopimelate epimerase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AC78_9RHOD)

HSP 1 Score: 303 bits (777), Expect = 9.150e-100
Identity = 150/284 (52.82%), Postives = 198/284 (69.72%), Query Frame = 0
Query:    4 FRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKL 287
            F+KYHG+GNDF+L+DN  +S  +L+  E+  VC+R+ GVGADGVIF++PP    SDF MR+YNSDG+EPEMCGNGIRCLARFA +  V   +   Y +DT AG I+PE+    + V+VDMG P L P ++P+ L  +   + ++   HV G DW    +  GNPHAV FV +E +  +D  LE+ GP +ENH  FP RTNTEF+Y  +  E D LVWERGAGRT+ACGTGACA +VA  +TGR  + V   ++LPGG L IEW    NH++MTGPA+LV+EG++
Sbjct:   32 FQKYHGIGNDFILVDNMKSSDTLLTADESVKVCDRHFGVGADGVIFMMPPVNDDSDFSMRIYNSDGSEPEMCGNGIRCLARFAHE--VLDSEKTVYKIDTLAGLIVPEIS--GDMVRVDMGEPELNPPKIPSLL--TPDPDTKEATYHVDGTDWQVVPIGTGNPHAVVFVDQEQFRTLDENLESVGPLYENHETFPARTNTEFIYVKSPEEIDFLVWERGAGRTLACGTGACASVVACSLTGRTGRKVA--VNLPGGRLDIEW-GEDNHMYMTGPAELVYEGEI 306          
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A0M1JLS7_9CYAN (Diaminopimelate epimerase n=1 Tax=Planktothricoides sp. SR001 TaxID=1705388 RepID=A0A0M1JLS7_9CYAN)

HSP 1 Score: 302 bits (774), Expect = 1.060e-99
Identity = 155/285 (54.39%), Postives = 190/285 (66.67%), Query Frame = 0
Query:    4 FRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKLA 288
            F KYHGLGNDF+LIDNR +S P+L+  +A  +C+R+ G+GADGVIF LP T P +D+ MR++NSDG+EPEMCGNGIRCLARF ADL    R    Y ++T AG I P+++    QV VDMG P L   ++PT L           LE VAGQ W  +CV+MGNPH +TFV        +  LE+ GP FE+HP+FPQRTN EFV         M VWERGAG T+ACGTGACA LVA  I GR E+   A I LPGG L IEW  S+  ++MTGPA+ VF GKL+
Sbjct:    5 FTKYHGLGNDFILIDNRQSSEPILTDVQAVQLCDRHFGIGADGVIFALPATSPDADYKMRIFNSDGSEPEMCGNGIRCLARFLADLQAPSRTPQTYHIETLAGMITPQIQADG-QVTVDMGVPRLTAAEIPTTLMEEDCRVIIQPLE-VAGQTWKVTCVNMGNPHCITFVNNVA----EIALESIGPQFEHHPIFPQRTNVEFVQVVAPDYLKMRVWERGAGITLACGTGACAALVAGFIIGRCERK--ATIELPGGSLVIEWSESNERIYMTGPAQRVFTGKLS 281          
BLAST of Gvermi12805.t1 vs. uniprot
Match: UPI001688BF70 (diaminopimelate epimerase n=1 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI001688BF70)

HSP 1 Score: 301 bits (772), Expect = 2.440e-99
Identity = 158/288 (54.86%), Postives = 200/288 (69.44%), Query Frame = 0
Query:    3 AFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDS-RLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKLAN 289
            AF KYHGLGNDFV+IDNRH+  PVL+P +A  VC+RN GVGADGVIF LP  +  +D+ MR+YNSDG+EPEMCGNGIRCLA+F  +LG +  +  +Y + T  G I+PE+ T   QV VDMG P L   ++PT L   AS +  ++   VAGQ W  +CV+MGNPH +TFV     +D+D+  L   GP FE+H VFPQRTNTEFV         M VWERGAG T+ACGTGACA +VAAV+ GR+E+   A + LPGG L I W ++ NH+ M+GPA+ VF G LA+
Sbjct:    6 AFTKYHGLGNDFVMIDNRHSPEPVLTPEQAVQVCDRNFGVGADGVIFALP-AQEGADYSMRIYNSDGSEPEMCGNGIRCLAKFLHELGAEAEQG-RYRIHTLGGLIVPEL-TADGQVTVDMGEPRLLATEIPTTL---ASEKVVNLPLEVAGQTWQVTCVNMGNPHCITFV-----EDVDAISLAEIGPQFEHHAVFPQRTNTEFVQVVRPDYLKMRVWERGAGPTLACGTGACATVVAAVLNGRSERQ--ATVELPGGPLLIHWSAADNHLHMSGPAQAVFSGTLAS 280          
BLAST of Gvermi12805.t1 vs. uniprot
Match: K9TDP4_9CYAN (Diaminopimelate epimerase n=2 Tax=Oscillatoriaceae TaxID=1892254 RepID=K9TDP4_9CYAN)

HSP 1 Score: 301 bits (770), Expect = 4.740e-99
Identity = 154/288 (53.47%), Postives = 197/288 (68.40%), Query Frame = 0
Query:    4 FRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNC----KYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKL 287
            F KY GLGNDF+LIDNR    P+++P++AE +C+RN G+GADGVIF LPPT+P +D+ MR+YNSD +EPEMCGNGIRCLARF  DLGV  R +     +Y + T AG +   +++   QV+VDMG P L   ++PT L      +  +V   VAG+ W  +CVSMGNPH +TFV  E  D +D  L   GP FENHP FP+RTNTEF+    ++   M VWERGAG T+ACGTGACA LVA V+TGR ++   A I LPGG L IEW  S   ++MTGPA+ VF G++
Sbjct:    5 FTKYQGLGNDFILIDNRQNPEPMITPSQAEQLCDRNFGIGADGVIFALPPTEPDTDYTMRIYNSDASEPEMCGNGIRCLARFLVDLGVPTRSSATGTGEYRIQTLAGVMTLTLKSDG-QVRVDMGLPRLLSSEIPTTL-CPPEEKAVNVPLSVAGKTWDVTCVSMGNPHCITFV--EDVDAVD--LAGIGPQFENHPAFPKRTNTEFIQVMGRSHLKMRVWERGAGATLACGTGACATLVAGVLTGRCDRQ--ATIELPGGPLHIEWSESDGRLYMTGPAERVFSGRI 284          
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A087SJN7_AUXPR (Diaminopimelate epimerase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SJN7_AUXPR)

HSP 1 Score: 301 bits (772), Expect = 5.780e-99
Identity = 156/287 (54.36%), Postives = 202/287 (70.38%), Query Frame = 0
Query:    4 FRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLK-TSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKE----VYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEG 285
            F KY GLGNDF+L+DNRH+++P+++P++A   C+R+ GVGADGVIF LPP  P SD+ MR+YNSDG+EPEMCGNGIRCLARF A+L     +  +Y VDT AG I PE+  G  +V+VDMG PILE   +PT L+ T+           V G++W F+CVSMGNPHA+TF  ++      D +D  L+  GP FE++PVFP RTNTEFV   + +   MLVWERGAG T+ACGTGACA +VA V+ GR ++     + LPGG L IEW  + N ++MTGPA+LVFEG
Sbjct:   23 FAKYQGLGNDFILVDNRHSATPLVTPSQAAKACDRHFGVGADGVIFALPPQAPDSDYAMRIYNSDGSEPEMCGNGIRCLARFVAELDADAPR--RYRVDTLAGLIQPELLPGG-RVRVDMGEPILEANAIPTTLQPTTPEGAVVKQCLTVDGKEWFFTCVSMGNPHAITFGYQDGTLIQTDSID--LQRVGPLFEHNPVFPARTNTEFVEILSPSHVRMLVWERGAGITLACGTGACATVVAGVLEGRLDRSCR--VDLPGGPLEIEWRQADNRIYMTGPAELVFEG 302          
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A540L191_MALBA (Diaminopimelate epimerase n=7 Tax=Maleae TaxID=721813 RepID=A0A540L191_MALBA)

HSP 1 Score: 302 bits (774), Expect = 1.500e-98
Identity = 162/290 (55.86%), Postives = 203/290 (70.00%), Query Frame = 0
Query:    4 FRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADL-GVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEH---VAGQDWTFSCVSMGNPHAVTFVTK--EVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKL 287
            F KYHGLGNDF+L+DNR +S P +SP +A  +C+RN G+GADGVIF LP    T D+ MR+YNSDG+EPEMCGNG+RC ARF A+L  +QGR + K  V TGAG IIPE++   + VKVDMG PIL+   VPTKL    +N+ Q V++    V G  W  +CVSMGNPH VTF T+  +     + +L   GP FENH VFP RTNTEFV     +   M VWERGAG T+ACGTGACAV+VAAV+ GRAE++    + LPGG L IEW   +NH++MTGPA++VF G +
Sbjct:   80 FVKYHGLGNDFILVDNRDSSEPKISPEQAAKLCDRNFGIGADGVIFALPGINGT-DYTMRIYNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFK--VHTGAGLIIPEIQEDGK-VKVDMGEPILKASDVPTKLP---ANKDQSVVKSGLDVDGVTWNVTCVSMGNPHCVTFGTEGGQNLKVDELKLADIGPKFENHEVFPARTNTEFVQVFTPSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERN--CTVDLPGGPLQIEWKEENNHIYMTGPAEVVFYGSV 360          
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A2K3DT07_CHLRE (Diaminopimelate epimerase n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DT07_CHLRE)

HSP 1 Score: 301 bits (770), Expect = 1.670e-98
Identity = 157/289 (54.33%), Postives = 198/289 (68.51%), Query Frame = 0
Query:    3 AFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLK-TSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEV---YDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKL 287
             F KY GLGNDF+L+DNRHTS PV++P +A  +C+RN G+G DGVIF LPP   T D  MR++NSDG+EPEMCGNGIRCLA+F +D+     +  KY + T AG I PEM     QV+VDMG PILE  +VPT L  T  S   Q  L  V G+ +  +CVSMGNPHAV +         DD+D  L A GP FE + VFP RTNTEFV   +++   M+VWERGAGRT+ACGTGACA++VA ++ GR +++    + LPGG L IEW  S NH++MTGPA+LVF G+L
Sbjct:   37 TFSKYQGLGNDFILVDNRHTSEPVVTPEQAVKICDRNFGIGGDGVIFALPPVGDT-DLTMRIFNSDGSEPEMCGNGIRCLAKFVSDIDNAAPR--KYKIHTLAGLIQPEM-LADGQVRVDMGTPILEGPKVPTTLAPTQGSTVVQQDLV-VEGKTYKVTCVSMGNPHAVIYSCDGEPIKIDDLDKELAALGPKFERNAVFPARTNTEFVEVISRSHVRMVVWERGAGRTLACGTGACALVVAGILEGRVDRNQVCRVDLPGGPLQIEWRQSDNHIYMTGPAELVFSGQL 320          
The following BLAST results are available for this feature:
BLAST of Gvermi12805.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3II36_9FLOR9.280e-16083.01Diaminopimelate epimerase n=1 Tax=Gracilariopsis c... [more]
R7QGK7_CHOCR3.360e-14669.82Diaminopimelate epimerase n=1 Tax=Chondrus crispus... [more]
A0A7S2S1Q0_9STRA6.400e-10054.17Diaminopimelate epimerase n=2 Tax=Rhizochromulina ... [more]
A0A7S3AC78_9RHOD9.150e-10052.82Diaminopimelate epimerase n=2 Tax=Rhodosorus marin... [more]
A0A0M1JLS7_9CYAN1.060e-9954.39Diaminopimelate epimerase n=1 Tax=Planktothricoide... [more]
UPI001688BF702.440e-9954.86diaminopimelate epimerase n=1 Tax=Leptolyngbya sp.... [more]
K9TDP4_9CYAN4.740e-9953.47Diaminopimelate epimerase n=2 Tax=Oscillatoriaceae... [more]
A0A087SJN7_AUXPR5.780e-9954.36Diaminopimelate epimerase n=2 Tax=Auxenochlorella ... [more]
A0A540L191_MALBA1.500e-9855.86Diaminopimelate epimerase n=7 Tax=Maleae TaxID=721... [more]
A0A2K3DT07_CHLRE1.670e-9854.33Diaminopimelate epimerase n=3 Tax=Chlamydomonas Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.310.10Diaminopimelate Epimerase; Chain A, domain 1coord: 128..279
e-value: 3.9E-49
score: 168.5
NoneNo IPR availableGENE3D3.10.310.10Diaminopimelate Epimerase; Chain A, domain 1coord: 1..127
e-value: 3.4E-39
score: 135.9
NoneNo IPR availablePANTHERPTHR31689:SF0DIAMINOPIMELATE EPIMERASE, CHLOROPLASTICcoord: 3..288
NoneNo IPR availableSUPERFAMILY54506Diaminopimelate epimerase-likecoord: 5..286
IPR001653Diaminopimelate epimerase, DapFPFAMPF01678DAP_epimerasecoord: 4..126
e-value: 4.2E-28
score: 97.9
coord: 161..282
e-value: 4.1E-25
score: 88.3
IPR001653Diaminopimelate epimerase, DapFTIGRFAMTIGR00652TIGR00652coord: 3..288
e-value: 1.4E-83
score: 278.3
IPR001653Diaminopimelate epimerase, DapFPANTHERPTHR31689DIAMINOPIMELATE EPIMERASE, CHLOROPLASTICcoord: 3..288
IPR001653Diaminopimelate epimerase, DapFHAMAPMF_00197DAP_epimerasecoord: 2..289
score: 35.181572
IPR018510Diaminopimelate epimerase, active sitePROSITEPS01326DAP_EPIMERASEcoord: 66..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1578778..1579650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12805.t1Gvermi12805.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1578778..1579650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12805.t1 ID=Gvermi12805.t1|Name=Gvermi12805.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=291bp
MTAFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFL
LPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYV
VDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLE
HVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQ
RTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKD
VPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKLANL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001653DAP_epimerase_DapF
IPR018510DAP_epimerase_AS