Gvermi12797.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12797.t1
Unique NameGvermi12797.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length282
Homology
BLAST of Gvermi12797.t1 vs. uniprot
Match: A0A2V3ILF7_9FLOR (Nudix hydrolase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILF7_9FLOR)

HSP 1 Score: 363 bits (933), Expect = 2.010e-124
Identity = 185/254 (72.83%), Postives = 213/254 (83.86%), Query Frame = 0
Query:   28 MKGSSQSPRALRALIFSFLVAAAALSVFFLMFSSVSVHPDTTSTAALLQALRDREKSYHVVSDRVVYDRYARVYSRQVKFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNIAHARFVYSFPQGQMERAKHVSVHMGAAAELEEEAQLQCDEWVNLLDGDEGRGAPQDKYQRESVYYFLCTAAHHVDDAADVDDEENIEVVHGVTSSQLRELAAAGALQSNNIAAALMAIDKLRRLRLLPYSA 281
            MKGS  SP  LRAL+      A AL+++    S+   HPDTT+T+ LL+AL+ R+ SY V+SD+VVYDRYARVYSRQ++FPDG+QF FDVWGRVWKNDSFAVVTVVPFDR T TFTL+REYNIAHAR+VYSFPQGQ ER+KH S+  GAAAELEEEA LQCDEWVNLL  D GRGAPQDKYQRE+V+YFLCTAAHHV  AAD D+EENIEVV GVT++QLR+L AAGALQSNNIAAALMA+ +L  LRLLPY+A
Sbjct:    1 MKGSDSSPP-LRALLLXXXXXAVALTLYLSPLSTTPPHPDTTTTSNLLKALQQRQTSYKVLSDKVVYDRYARVYSRQIRFPDGRQFDFDVWGRVWKNDSFAVVTVVPFDRPTKTFTLVREYNIAHARYVYSFPQGQYERSKHRSIRHGAAAELEEEAHLQCDEWVNLLHNDLGRGAPQDKYQRETVHYFLCTAAHHVQHAADRDEEENIEVVRGVTATQLRQLVAAGALQSNNIAAALMALHELSTLRLLPYTA 253          
BLAST of Gvermi12797.t1 vs. uniprot
Match: A0A7S2RZZ7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZZ7_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.300e-18
Identity = 70/217 (32.26%), Postives = 109/217 (50.23%), Query Frame = 0
Query:   59 FSSVSVHPDTTSTAALLQALRDREKSYHVVSDRVVYDRYARVYSRQVKFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNIAHARFVYSFPQGQMERAKHVSVHMGAAA-ELEEEAQLQCDEWVNLLDGDEGRGAPQDKYQRESVYYFLCTAAHHVDDAADVDDEENIEVVHGVTSSQLRELAAAGALQSNNIAAALMAIDKLRRL 274
            FS VS      STA+           Y ++S++VVY+R+ +V  R+V  P G    +DV  +  K    A++    +D +T T T++REYN    + +     G +E  KH S  + AA  ELEEE  L    W  L     G     DKY +  V  +L   AH +D+   +D+EE+IE+V GVT  +++ +  +G +      A+L+A+ KL+ L
Sbjct:    9 FSEVSQSGIKASTAS---------SGYKILSEKVVYERWRKVIQRKVLMPKGLVVDYDVVDQ--KGAGAAII--FAWDSSTKTATIVREYNPGCHQVLGGLAAGLIEDDKHGSDPLIAARHELEEECHLGGGTWYQLTKP--GVAIAMDKYVQTRVTPYLVIDAHKIDNPRPLDEEEDIEIVGGVTVDEIKNMIESGDMNLVGSWASLLALQKLKEL 210          
BLAST of Gvermi12797.t1 vs. uniprot
Match: A0A7S1BIB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIB0_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.350e-17
Identity = 66/197 (33.50%), Postives = 96/197 (48.73%), Query Frame = 0
Query:   85 YHVVSDRVVYDRYARVYSRQVKFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNIAHARFVYSFPQGQMERA-KHVSVHMGAAA--ELEEEAQLQCDEWVNLLDGDEGRGAPQDKYQRESVYYFLCTAAHHVDDAAD----VDDEENIEVVHGVTSSQLRELAAAGALQSNNIAAALMAIDKLRRL 274
            Y  +SD + Y R+  +  R+VK P+G    FDV  +  K      V V  +D  T T TLI+EYN    R +     G +E   KH       A   ELEEE  L+   W +LL+ D     P DKY       +L   A  +D A++    +DDEE+IE++HGV+  ++ E+   G +        L+A++KLR L
Sbjct:  112 YEHISDILGYSRWRSIIQRKVKMPNGNVVDFDVVDQKGKG----AVVVFAWDTRTKTATLIKEYNPGCMRIITGVAAGIIESGDKHDGGDPMVAGRFELEEECHLRNGRWYSLLEDD--TTVPHDKYSVTEFSAYLVLDADTIDSASEDVRALDDEEDIEIIHGVSVPKILEMIRKGEMNLVGGWTCLLALEKLREL 302          
BLAST of Gvermi12797.t1 vs. uniprot
Match: A0A1S8VVP4_9FUNG (Uncharacterized protein n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VVP4_9FUNG)

HSP 1 Score: 87.4 bits (215), Expect = 1.640e-16
Identity = 64/199 (32.16%), Postives = 98/199 (49.25%), Query Frame = 0
Query:   75 LQALRDREKSYHVVSDRVVYDRYARVYSRQVKFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNIAHARFVYSFPQGQMERAKHVSVHMGAAAELEEEAQLQCDEWVNLLDGDEGRGAPQDKYQRESVYYFLCTAAHHVDDAADVDDEENIEVVHGVTSSQLRELAAAGALQSNNIAAALMAIDKLRR 273
            L+A   R+    +V+++  Y R+  V+SR+VKFPDG++  +DV G    + +FA  TV P++  T    LI EY        Y+   G  +  KH  +   A  EL EEA+L   +W+ L+  D   G P+ K+ R     FL   A         D EE IE +  VT  +L+ +   G +   ++   LMA+D LR+
Sbjct:   83 LKAEVQRQDPLPIVAEQQSYKRFLTVWSRRVKFPDGREVDWDVAGHGTLSPAFA--TVFPYNTETKKVRLIVEYAQGPNLMSYTLAAGGFDPRKHADIQETAICELSEEAKLCNGKWIRLIP-DAHNGIPELKWSRNRFVPFLVINAEEDITPLARDAEECIETLD-VTLDELQHMILNGLVMLPSVQTTLMAMDWLRK 277          
BLAST of Gvermi12797.t1 vs. uniprot
Match: B8CE31_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE31_THAPS)

HSP 1 Score: 85.1 bits (209), Expect = 8.890e-16
Identity = 63/215 (29.30%), Postives = 97/215 (45.12%), Query Frame = 0
Query:   85 YHVVSDRVVYDRYARVYSRQVKFP-------------DGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNIAHARFVYSFPQGQMERAKHVSVH--------MGAAAELEEEAQLQCDEWVNLLDGDEGRGAPQDKYQRESVYYFLCTAAHHVDDAADVDDEENIEVVHGVTSSQLRELAAAGALQSNNIAAALMAIDKLRRLRLLP 278
            Y +V+D V Y  + +V  R V  P               K   FDV  +   +D+   V +  ++  + T T++REY     R +     G +E AKH S          + A  ELEEE  L   +W  L +   G   P DKY    +  +L    HHV +   +DDEE+IE++ GVT  ++R++   G +       AL+A++KLR    +P
Sbjct:   56 YTIVNDEVRYSGWRKVIRRTVSSPIRHHPHHYDTYDRQHKTIEFDVIDQ--NHDTNGAVIIFAWNSTSKTATIVREYMPGCHRVLGGLAAGLVENAKHASGDGEIEEDSLVAARFELEEECHLAGGKWFRLTEN--GVSIPMDKYVVTEITPYLVIDPHHVPNPRPLDDEEDIEIITGVTVKEIRQMIREGDMNLVGCFGALLALEKLREFGEIP 266          
BLAST of Gvermi12797.t1 vs. uniprot
Match: A0A4D9D3K8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3K8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.450e-15
Identity = 60/178 (33.71%), Postives = 90/178 (50.56%), Query Frame = 0
Query:  102 SRQVKFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNIAHARFVYSFPQGQMERAKHVSVHMGAAAELEEEAQLQCDEWVNLLDGDEGRGAPQDKYQRESVYYFLCT-AAHHVDDAADVDDEENIEVVHG-VTSSQLRELAAAGALQSNNIAAALMAIDKLRRLRLL 277
             R V++PDG+Q  FDV  +   +     V V  ++  ++T TLI EY     + +++   G  E  KH      A  ELEEEA L+   W NLL+G+   G   DKY     +++L       V+  A   D+E + VVH  VT  ++R L   G +      A+L+A++KLR L+LL
Sbjct:   97 QRDVQYPDGRQVTFDVMDQPGSS-----VLVFIWNSTSHTTTLIEEYAPGSLQVIFTPVAGGCEDEKHEDPQHAAVLELEEEAHLKGGTWFNLLEGEGEEGVAADKYSTCPFHFYLVVDPVREVEKNARKRDDEELLVVHREVTLVEVRRLIRRGKMTVPGACASLLAMEKLRALKLL 269          
BLAST of Gvermi12797.t1 vs. uniprot
Match: A0A448Z503_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z503_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 4.250e-15
Identity = 55/193 (28.50%), Postives = 93/193 (48.19%), Query Frame = 0
Query:   82 EKSYHVVSDRVVYDRYARVYSRQVKFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNIAHARFVYSFPQGQMERAKHVSVHMGAAAELEEEAQLQCDEWVNLLDGDEGRGAPQDKYQRESVYYFLCTAAHHVDDAADVDDEENIEVVHGVTSSQLRELAAAGALQSNNIAAALMAIDKLRRL 274
            +K++ ++ + +VY  +  +  R V+  +GK   FD+ G          V +  +D  + T T+IREY  A  R ++    G +E     +  + A  ELEEE  L+   W+ LL     + A  DKY   ++  +L       ++   +DDEE+IE+V GVT  ++ E    G +       +L+AI KL+ L
Sbjct:   96 DKTFEILEENIVYSGWRTINKRIVRMRNGKVVDFDLVG---VKTGEGAVLIFAWDSKSKTATMIREYMPASHRVLWGLAAGLIEDKHEHNTELAARHELEEECHLKGGRWIPLLT----QPAAMDKYSTTTIQCYLVIDPEPEENPKPLDDEEDIEIVSGVTIPEILEFVRNGEMNLVGGYGSLLAIQKLQEL 281          
BLAST of Gvermi12797.t1 vs. uniprot
Match: A0A1E7ER69_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER69_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 9.400e-14
Identity = 57/197 (28.93%), Postives = 97/197 (49.24%), Query Frame = 0
Query:   80 DREKSYHVVSDRVVYDRYARVYSRQVKFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNIAHARFVYSFPQGQMERAKHVS--VHMGAAAELEEEAQLQCDEWVNLLDGDEGRGAPQDKYQRESVYYFLCTAAHHVDDAADVDDEENIEVVHGVTSSQLRELAAAGALQSNNIAAALMAIDKLRRL 274
            + + ++ ++ ++ VY  +  +  R+V+  + K   FD+ G V   DS   V +  +D  + T TLIREY  A  R ++    G +E  KH +    + A  ELEEE  L+  +W+ LL     +    DKY   ++  +L       D+   +D+EE+IE++ GVT  ++      G +        L+AI+KLR L
Sbjct:   43 ENKNNFEIIDEKTVYSGWRTIVQRKVRMRNNKVVDFDLVG-VKTGDS--AVLIFAWDTKSKTATLIREYMPASNRILWGLAAGLVEE-KHDNHNTELAARHELEEECHLKNGKWIPLLH----QPTAMDKYSTTTIQCYLVLDPEKEDNPKALDEEEDIEIIPGVTIPEILRWVNNGEMNLVGGFGCLLAIEKLREL 231          
BLAST of Gvermi12797.t1 vs. uniprot
Match: A0A507DHA5_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DHA5_9FUNG)

HSP 1 Score: 75.5 bits (184), Expect = 8.380e-13
Identity = 63/201 (31.34%), Postives = 99/201 (49.25%), Query Frame = 0
Query:   80 DREKSYHVVSDRVVYDRYARVYSRQVKFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNIAHARFVYSFPQGQMERAKHVSVHMGAAAELEEEAQLQCDEWVNLLDGDEGRGAPQD-KYQRESVYYFLCTAAHHVDDAADV--DDEENIEVVHGVTSSQLRELAAAGALQSNNIAAALMAIDKLRRLRLL 277
            ++ K   ++S+ + Y+RY +V+ R+V+FPD    ++DV G         V+T    ++ TN   L+ EY+       Y+F  G  E  KH S+   A  EL EEA L+  EW+ L+  D   GA  + K+ R     +L      VDD      D EE ++V  GVT  +L+ +   G L+  ++   +M  + LRR  LL
Sbjct:    3 EQNKGLTILSEVLAYERYVKVWHREVEFPDKTVHSWDVVGHSIDAQFCVVMTFNTRNKTTN---LVIEYSQGTNDMHYTFASGAYEPTKHGSMLDAAKDELSEEAALKHGEWIPLVGAD---GAIAELKWGRNRFVPYL--VLDPVDDECPKPRDAEELMQVRRGVTMEELKGIVLGGKLRLPSVQTWVMGEEVLRRRGLL 195          
BLAST of Gvermi12797.t1 vs. uniprot
Match: R1CFS6_EMIHU (N-acetyltransferase domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CFS6_EMIHU)

HSP 1 Score: 76.6 bits (187), Expect = 2.590e-12
Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 0
Query:   85 YHVVSDRVVYDRYARVYSRQVKFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNIA---HARFVYSFPQGQMERAKHVSVHMGAAAELEEEAQLQCDEWVNLLDGDEGRGAPQDKYQRESVYYFLC 218
            + ++S+  ++DRY RV SR V++PDG++ AFD+ G   KN+   VV  V F  A  +  L+RE+  A       + + P G  +  KH S    A AEL EEAQL+  EWV LL  D   G  + K+ R     FLC
Sbjct:    5 FAILSESTLHDRYLRVESRLVRYPDGREVAFDIVGHP-KNEHHFVVVFVYFT-ARRSAVLLREFAQAALPQRGSLANLPTGGFDPRKHASRAEAARAELSEEAQLRGGEWVCLLPPDHP-GVLEAKWCRNRFTPFLC 138          
The following BLAST results are available for this feature:
BLAST of Gvermi12797.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3ILF7_9FLOR2.010e-12472.83Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S2RZZ7_9STRA1.300e-1832.26Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1BIB0_9STRA6.350e-1733.50Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A1S8VVP4_9FUNG1.640e-1632.16Uncharacterized protein n=2 Tax=Batrachochytrium s... [more]
B8CE31_THAPS8.890e-1629.30Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A4D9D3K8_9STRA1.450e-1533.71Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A448Z503_9STRA4.250e-1528.50Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A1E7ER69_9STRA9.400e-1428.93Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A507DHA5_9FUNG8.380e-1331.34Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
R1CFS6_EMIHU2.590e-1238.69N-acetyltransferase domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 129..244
e-value: 2.6E-5
score: 24.3
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 81..275
e-value: 1.4E-24
score: 88.6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..281
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..59
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 95..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1543132..1543977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12797.t1Gvermi12797.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1543132..1543977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12797.t1 ID=Gvermi12797.t1|Name=Gvermi12797.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=282bp
MTVRRSPPYALLPLLPHADPNPTNSRAMKGSSQSPRALRALIFSFLVAAA
ALSVFFLMFSSVSVHPDTTSTAALLQALRDREKSYHVVSDRVVYDRYARV
YSRQVKFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRATNTFTLIREYNI
AHARFVYSFPQGQMERAKHVSVHMGAAAELEEEAQLQCDEWVNLLDGDEG
RGAPQDKYQRESVYYFLCTAAHHVDDAADVDDEENIEVVHGVTSSQLREL
AAAGALQSNNIAAALMAIDKLRRLRLLPYSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase-like_dom_sf